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Sed0021808 (gene) of Chayote v1 genome

Gene IDSed0021808
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:5400386..5401349
RNA-Seq ExpressionSed0021808
SyntenySed0021808
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579026.1 hypothetical protein SDJN03_23474, partial [Cucurbita argyrosperma subsp. sororia]5.6e-6576.27Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA
        MGNY+SCTLST I+G+ SNSSTT TV+FPSGE+R+F EPV AAELM EMPNFFV NSQSVHVGRRFSAL ADEDLEMGNSY++FPMKKVNSVVS ADMGA
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA

Query:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLDV---EEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR
        LFLAAERV+GGK+RRIVGGG+++       E+E KLKLD    EEFS  P + HRRSMCRSRKPLLETIVEEP+C R
Subjt:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLDV---EEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR

XP_011656216.1 uncharacterized protein LOC105435675 [Cucumis sativus]3.3e-6574.19Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA
        MGNYISCTLST I G+ S SSTT TVIFPSG+IR FHE + AAELM E+PNFF+ NSQS+H+GRRFSAL ADEDLEMGN Y+MFPM KVNSVVS ADMGA
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA

Query:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEE---KLKL---------DVEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR
        LFLAAERV+GGK+RRIVGGG+S V VWP VE EE   KLKL         D+E FS  PE AHRRSMCRSRKPLLETI EEPIC R
Subjt:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEE---KLKL---------DVEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR

XP_022939318.1 uncharacterized protein LOC111445271 [Cucurbita moschata]5.6e-6576.84Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA
        MGNY+SCTLST I G+ SNSSTT TV+FPSGE+R+F EPV AAELM EMPNFFV NSQSVHVGRRFSAL ADEDLEMGNSYV+FPMKKVNSVVS ADMGA
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA

Query:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLDV---EEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR
        LFLAAERV+GGK+RRIVGGG+++       E+E KLKLD    EEFS  P + HRRSMCRSRKPLLETIVEEP+C R
Subjt:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLDV---EEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR

XP_023550655.1 uncharacterized protein LOC111808736 [Cucurbita pepo subsp. pepo]5.6e-6576.84Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA
        MGNY+SCTLST I G+ SNSSTT TV+FPSGE+R+F EPV AAELM EMPNFFV NSQSVHVGRRFSAL ADEDLEMGNSYV+FPMKKVNSVVS ADMGA
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA

Query:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLD---VEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR
        LFLAAERV+GGK+RRIVGGG+++       E+E KLKLD    EEFS  P ++HRRSMCRSRKPLLETIVEEP+C R
Subjt:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLD---VEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR

XP_038876498.1 uncharacterized protein LOC120068930 [Benincasa hispida]4.1e-6877.72Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA
        MGNYISCTLSTPI G+ S SSTT TVIFPSG+IR FHEPV AAELM E+PNFF+ NSQSV +GRRFSAL ADE+LEMGN YVMFPMKKVNSVVS ADMGA
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA

Query:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEE---KLKL-------DVEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR
        LFLAAERV+GGK+RRI+GGGES+V VWP VEA+E   KLKL       DV+ FS APE  HRRSMCRSRKPLLETIVEEPIC R
Subjt:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEE---KLKL-------DVEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR

TrEMBL top hitse value%identityAlignment
A0A0A0KN52 Uncharacterized protein1.6e-6574.19Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA
        MGNYISCTLST I G+ S SSTT TVIFPSG+IR FHE + AAELM E+PNFF+ NSQS+H+GRRFSAL ADEDLEMGN Y+MFPM KVNSVVS ADMGA
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA

Query:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEE---KLKL---------DVEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR
        LFLAAERV+GGK+RRIVGGG+S V VWP VE EE   KLKL         D+E FS  PE AHRRSMCRSRKPLLETI EEPIC R
Subjt:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEE---KLKL---------DVEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR

A0A6J1FLB6 uncharacterized protein LOC1114452712.7e-6576.84Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA
        MGNY+SCTLST I G+ SNSSTT TV+FPSGE+R+F EPV AAELM EMPNFFV NSQSVHVGRRFSAL ADEDLEMGNSYV+FPMKKVNSVVS ADMGA
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA

Query:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLDV---EEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR
        LFLAAERV+GGK+RRIVGGG+++       E+E KLKLD    EEFS  P + HRRSMCRSRKPLLETIVEEP+C R
Subjt:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLDV---EEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR

A0A6J1H4S2 uncharacterized protein LOC1114605041.1e-6376.27Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA
        MGNY+SCTLSTPI GR S+S    TV+FPSGE+R+FHEPV AAELM EMP+FFV NSQSV VGRRFSAL ADEDLEMGN YVMFPMKKVNSVVS  DMG 
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA

Query:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEE---KLKLD--VEEFSAAPELAHRRSMCRSRKPLLETIVEEPIC
        L LAAERV+  K+RRIVGGGES+V V P VEAEE   KLK+D  VE FS  PELAHRR+MCR RKPLLETIVEEP+C
Subjt:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEE---KLKLD--VEEFSAAPELAHRRSMCRSRKPLLETIVEEPIC

A0A6J1JT13 uncharacterized protein LOC1114875866.6e-6476.27Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA
        MGNY+SCTLSTPI GR  +S    TV+FPSGE+R+FHEPV AAELM EMP+FFV NSQSV VGRRFSAL ADEDLEMGN YVMFPMKKVNSVVS  DMGA
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA

Query:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEE---KLKL--DVEEFSAAPELAHRRSMCRSRKPLLETIVEEPIC
        L LAAERV+G K+RRIVGGGES+V V P VEAEE   KLK+  DVE FS  PELAHRR+MCR +KPLLETIVEEP+C
Subjt:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEE---KLKL--DVEEFSAAPELAHRRSMCRSRKPLLETIVEEPIC

A0A6J1K1K1 uncharacterized protein LOC1114898033.9e-6475.71Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA
        MGNY+SCTLST I  + SNSSTT TV+FP+GE+R+F EPV AAELM EMPNFFV NSQSVHVGRRFSAL ADEDLEMGNSYV+FPMKKVNSVVS ADMGA
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGA

Query:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLD---VEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR
        LFLAAERV+GGK+RRIVGGG+++       E+E KLKLD    EEFS  P + HRRSMCRSRKPLLETIVEEP+C R
Subjt:  LFLAAERVAGGKRRRIVGGGESDVGVWPAVEAEEKLKLD---VEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23690.1 unknown protein1.6e-0628.41Show/hide
Query:  SNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGALFLAA
        S    TA +I   G + +F  PV    ++ + P  F+ NS  +      SA++ADE+ ++G  Y   P+  ++  + A +M AL + A
Subjt:  SNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGALFLAA

AT3G03280.1 unknown protein1.3e-2742.37Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMG--NSYVMFPMKKVNSVVSAADM
        MGNY+SC L+       ++SS  A VI P G +R  H P  AAELM+EMP++F+ +++SV VGR+F  L AD+DL++G  + YV FPM +  S  +A+DM
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMG--NSYVMFPMKKVNSVVSAADM

Query:  GALFLAA-ERVAGGKRRRIVGGGESDVGV---WPAVEAEEKLKLDVEEFSAAPELAHRRSMCRSRKPLLETIVEEPI
          L+L   +R      RR+    E +  V    P +  E     D+EEFSAA E  HR S+ +S+KP LETI E+ +
Subjt:  GALFLAA-ERVAGGKRRRIVGGGESDVGV---WPAVEAEEKLKLDVEEFSAAPELAHRRSMCRSRKPLLETIVEEPI

AT4G37240.1 unknown protein1.9e-0727.13Show/hide
Query:  SGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGALFLAA--------
        S   S    TA +I   G + +F  PV    ++L+ P  F+ NS  +      +A++ADE+L++G  Y   P+  +   + A +M AL + A        
Subjt:  SGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGALFLAA--------

Query:  ---------ERVAGGKRRRIVGGGESDVG
                 E +   K R  VG G+  VG
Subjt:  ---------ERVAGGKRRRIVGGGESDVG

AT5G17350.1 unknown protein5.2e-2941.36Show/hide
Query:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMG--NSYVMFPMKKVNSVVSAADM
        MGNY+S  LS       S+SS+ A VI P G +R  H P+ AAELM+E+P+FF+ +++S+ +GR+F  L AD+DL++   + YV FPM +  S  +A+D+
Subjt:  MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMG--NSYVMFPMKKVNSVVSAADM

Query:  GALFLAAERVAGGKRRRIVGGGESDVGV-----------------WPAVEAEEKLKL-DVEEFSAAPELAHRRSMCRSRKPLLETIVEEPI
          LF+AA++    +RR  VG   S   V                    + A  KL L D+EEFSAA E  HR S+ +S+KP LETIVEE +
Subjt:  GALFLAAERVAGGKRRRIVGGGESDVGV-----------------WPAVEAEEKLKL-DVEEFSAAPELAHRRSMCRSRKPLLETIVEEPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTACATTTCTTGTACGCTTTCGACTCCAATTAGCGGCAGAGGTTCGAATTCTTCGACGACTGCGACGGTGATCTTTCCGAGCGGCGAGATTCGGAAATTTCA
CGAACCGGTAAACGCGGCGGAGCTGATGTTGGAGATGCCCAATTTCTTCGTTGCAAATTCTCAATCGGTTCATGTTGGCCGGAGATTTTCGGCTCTGACGGCGGACGAGG
ATCTGGAAATGGGGAATTCGTACGTCATGTTTCCGATGAAGAAGGTGAATTCCGTGGTGTCGGCGGCGGATATGGGGGCGTTGTTCCTCGCCGCCGAGCGGGTCGCCGGC
GGGAAGAGGCGGCGGATCGTCGGCGGTGGGGAATCGGATGTTGGTGTTTGGCCGGCGGTGGAAGCCGAGGAGAAGTTGAAATTGGATGTGGAGGAGTTTTCGGCGGCGCC
GGAGTTGGCTCATCGGCGGTCGATGTGTAGGTCGAGGAAGCCGTTGTTGGAAACTATAGTTGAAGAGCCGATATGTTTAAGATAA
mRNA sequenceShow/hide mRNA sequence
TTTTCAAATAATCACATGATCTTATCATTCGACCATCAATTTCATTATAAATTAATTTCCTTCTAATTTTTCCTCAACCCACCAAAAGATTTCCACTCTGTTTTTCAAAT
CTTTTGTAATTTTGTCCAATTCGTTCGATTTTTCCACTGATTTTTCATGGGGAATTACATTTCTTGTACGCTTTCGACTCCAATTAGCGGCAGAGGTTCGAATTCTTCGA
CGACTGCGACGGTGATCTTTCCGAGCGGCGAGATTCGGAAATTTCACGAACCGGTAAACGCGGCGGAGCTGATGTTGGAGATGCCCAATTTCTTCGTTGCAAATTCTCAA
TCGGTTCATGTTGGCCGGAGATTTTCGGCTCTGACGGCGGACGAGGATCTGGAAATGGGGAATTCGTACGTCATGTTTCCGATGAAGAAGGTGAATTCCGTGGTGTCGGC
GGCGGATATGGGGGCGTTGTTCCTCGCCGCCGAGCGGGTCGCCGGCGGGAAGAGGCGGCGGATCGTCGGCGGTGGGGAATCGGATGTTGGTGTTTGGCCGGCGGTGGAAG
CCGAGGAGAAGTTGAAATTGGATGTGGAGGAGTTTTCGGCGGCGCCGGAGTTGGCTCATCGGCGGTCGATGTGTAGGTCGAGGAAGCCGTTGTTGGAAACTATAGTTGAA
GAGCCGATATGTTTAAGATAATTTTGGGGAAAGTGGAGAATTGGGGGATTAATTTGAAAGTATTTGAATTGTTTTTTTTTTGTTTGGATTTGGGGGTTTTTCTTTTTGAT
AATTAGTAAAAGGAAAACCTATTGGTTCATTGATTAGGATCATGGAAAGATTAGTTGATTGATGTTAGACTTTTGGAATTTTTCTATTCTGTTTGAAGAATGGCAAGATT
TGTATAGTTATGTCTAATACTTCACTCTATATAATTTTTTTGTTAATTGTGTAAATATGTATGATACTTCGCCCAATATTAAAC
Protein sequenceShow/hide protein sequence
MGNYISCTLSTPISGRGSNSSTTATVIFPSGEIRKFHEPVNAAELMLEMPNFFVANSQSVHVGRRFSALTADEDLEMGNSYVMFPMKKVNSVVSAADMGALFLAAERVAG
GKRRRIVGGGESDVGVWPAVEAEEKLKLDVEEFSAAPELAHRRSMCRSRKPLLETIVEEPICLR