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Sed0021822 (gene) of Chayote v1 genome

Gene IDSed0021822
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationLG04:47086525..47086897
RNA-Seq ExpressionSed0021822
SyntenySed0021822
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588978.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]7.2e-4087.1Show/hide
Query:  AIHTAALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA
        AIHTAALK I++RC+SLGRKQEAA  G+DDVPKGHFAVYVG+NRSR+VVPISLLTHPDFQ LLRLAEEEFGF HHMGLTIPCEEV+FRSLTAA
Subjt:  AIHTAALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA

XP_004144828.1 auxin-responsive protein SAUR50 [Cucumis sativus]8.3e-3684.44Show/hide
Query:  ALKHILRRCTSLGRKQE--AAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA
        ALK I++RC+SLGRKQ+  A PP YD VPKGHFAVYVG NRSR+VVPISLLTHPDFQ LLRLAEEEFGFRHHMGLTIPCEEV+FRSLTAA
Subjt:  ALKHILRRCTSLGRKQE--AAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA

XP_022928516.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]5.5e-4086.32Show/hide
Query:  AIHTAALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAAHQ
        AIHTAALK I++RC+SLGRKQEAA  G+DDVPKGHFAVYVG+NRSR+VVPISLLTHPDFQ LLRLAEEEFGF HHMGLTIPCEEV+FRSLTAA Q
Subjt:  AIHTAALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAAHQ

XP_022989149.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]5.2e-3882.65Show/hide
Query:  AIHTAALKHILRRCTSLGRKQEA-----APPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA
        AIHTAALK I++RC+SLGRKQEA     A  G+DDVPKGHFAVYVG+NRSR+VVPISLLTHPDFQ LLRLAEEEFGF HHMGLTIPCEEV+FRSLTAA
Subjt:  AIHTAALKHILRRCTSLGRKQEA-----APPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA

XP_023529815.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]6.8e-3881.82Show/hide
Query:  AIHTAALKHILRRCTSLGRKQE------AAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA
        AIHTAALK I++RC+SLGRKQE      AA  G+DDVPKGHFAVYVG+NRSR+VVPISLLTHPDFQ LLRLAEEEFGF HHMGLTIPCEEV+FRSLTAA
Subjt:  AIHTAALKHILRRCTSLGRKQE------AAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA

TrEMBL top hitse value%identityAlignment
A0A0A0K5S8 Uncharacterized protein4.0e-3684.44Show/hide
Query:  ALKHILRRCTSLGRKQE--AAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA
        ALK I++RC+SLGRKQ+  A PP YD VPKGHFAVYVG NRSR+VVPISLLTHPDFQ LLRLAEEEFGFRHHMGLTIPCEEV+FRSLTAA
Subjt:  ALKHILRRCTSLGRKQE--AAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA

A0A1S3BJD0 auxin-induced protein 15A2.0e-3582.22Show/hide
Query:  ALKHILRRCTSLGRKQE--AAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA
        +LK I++RC+SLGRKQ+  + PP YD VPKGHFAVYVG NRSR+VVPISLLTHPDFQ LLRLAEEEFGFRHHMGLTIPCEEV+FRSLTAA
Subjt:  ALKHILRRCTSLGRKQE--AAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA

A0A6J1EKI0 auxin-responsive protein SAUR50-like2.7e-4086.32Show/hide
Query:  AIHTAALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAAHQ
        AIHTAALK I++RC+SLGRKQEAA  G+DDVPKGHFAVYVG+NRSR+VVPISLLTHPDFQ LLRLAEEEFGF HHMGLTIPCEEV+FRSLTAA Q
Subjt:  AIHTAALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAAHQ

A0A6J1GME7 auxin-responsive protein SAUR50-like8.9e-3683.52Show/hide
Query:  AALKHILRRCTSLGRKQEAA--PPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA
        AALKHI++RC+SLGRKQ+AA     YD VPKGHFAVYVG+NRSR+VVPISLLTHPDFQ LLRLAEEEFGF HHMGLTIPCEEV+FRSLTAA
Subjt:  AALKHILRRCTSLGRKQEAA--PPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA

A0A6J1JNJ6 auxin-responsive protein SAUR50-like2.5e-3882.65Show/hide
Query:  AIHTAALKHILRRCTSLGRKQEA-----APPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA
        AIHTAALK I++RC+SLGRKQEA     A  G+DDVPKGHFAVYVG+NRSR+VVPISLLTHPDFQ LLRLAEEEFGF HHMGLTIPCEEV+FRSLTAA
Subjt:  AIHTAALKHILRRCTSLGRKQEA-----APPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAA

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR502.7e-2965.26Show/hide
Query:  TAALKHILRRCTSLGRKQEAAPPGYD------DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTA
        TA LK IL+RC+SLG+K      GYD      DVPKGHF VYVG+NRSR++VPIS LTHP+FQSLL+ AEEEFGF H MGLTIPC+E++F++LT+
Subjt:  TAALKHILRRCTSLGRKQEAAPPGYD------DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTA

P0DKL1 Auxin-responsive protein SAUR502.1e-2154.76Show/hide
Query:  ALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRS
        A+K I+++C+S G+  + +    +DVPKGHF VYVG+ R+R++VPIS L HP FQ LL+ +EEEFGF H MG+ IPC+EV F S
Subjt:  ALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRS

P32295 Indole-3-acetic acid-induced protein ARG71.4e-1459.38Show/hide
Query:  DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHM-GLTIPCEEVLFRSLTA
        D PKG+ AVYVG+N  R V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC E LF+ +T+
Subjt:  DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHM-GLTIPCEEVLFRSLTA

P33079 Auxin-induced protein 10A53.2e-1459.38Show/hide
Query:  DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHM-GLTIPCEEVLFRSLTA
        DVPKG+ AVYVGD   R  +P+S L  P FQ LL  AEEEFG+ H M GLTIPC+E  F ++TA
Subjt:  DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHM-GLTIPCEEVLFRSLTA

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 106.8e-2560.22Show/hide
Query:  AALKHILRRCTSLGRKQEAAPPGYD-------DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSL
        A++K I++RC+SL + +      Y+       DVPKGHF VYVG NRSR++VPIS L H +FQ+LLRLAEEEFGF H MGLTIPC+EV FRSL
Subjt:  AALKHILRRCTSLGRKQEAAPPGYD-------DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSL

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family1.4e-2865.26Show/hide
Query:  TAALKHILRRCTSLGRKQEAAPPGYDD------VPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTA
        TA +K IL+RC+SLG+KQ     G D+      VPKGHF VYVG+NR R+VVPIS LT P+FQ LL+ AEEEFGF H MGLTIPCEEV+FRSLT+
Subjt:  TAALKHILRRCTSLGRKQEAAPPGYDD------VPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTA

AT2G21220.1 SAUR-like auxin-responsive protein family1.6e-2967.78Show/hide
Query:  TAALKHILRRCTSLGRKQEAAPPGYD-DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTA
        TA LK IL+RC+SL + Q     G   DVPKGHF VYVG+ RSR++VPIS LTHP F+SLL+ AEEEFGF H MGLTIPCEEV+FRSLT+
Subjt:  TAALKHILRRCTSLGRKQEAAPPGYD-DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTA

AT4G34760.1 SAUR-like auxin-responsive protein family1.9e-3065.26Show/hide
Query:  TAALKHILRRCTSLGRKQEAAPPGYD------DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTA
        TA LK IL+RC+SLG+K      GYD      DVPKGHF VYVG+NRSR++VPIS LTHP+FQSLL+ AEEEFGF H MGLTIPC+E++F++LT+
Subjt:  TAALKHILRRCTSLGRKQEAAPPGYD------DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTA

AT4G36110.1 SAUR-like auxin-responsive protein family8.0e-2968.6Show/hide
Query:  AALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSL
        A+LK IL+RC+SLG+K +     ++DVPKGHF VYVG +RSR+VVPIS L H +FQSLL+LAEEEFGF H MGLTIPC+EV+FRSL
Subjt:  AALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSL

AT4G38860.1 SAUR-like auxin-responsive protein family4.0e-2867.03Show/hide
Query:  TAALKHILRRCTSLGRKQEAAPPGYD-DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHM-GLTIPCEEVLFRSLTA
        TA LK IL+RC+SLG+KQ     G   DVPKGHF VYVG+ R+R++VPIS LTHP+F  LL+ AEEEFGFRH M GLTIPCEEV+F SLT+
Subjt:  TAALKHILRRCTSLGRKQEAAPPGYD-DVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHM-GLTIPCEEVLFRSLTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCACACGGCGGCGCTCAAGCACATTCTCAGACGCTGCACCAGCCTAGGGCGGAAGCAAGAGGCGGCGCCGCCCGGATACGACGACGTTCCGAAGGGGCATTT
CGCCGTGTACGTCGGCGACAATCGGAGCCGACATGTCGTTCCGATCTCGCTGTTGACTCACCCCGATTTTCAGTCCCTCCTCCGCCTTGCCGAGGAGGAATTTGGCTTCC
GCCACCACATGGGACTCACTATTCCCTGTGAAGAGGTGCTTTTCCGGTCACTCACCGCTGCCCACCAAAATGCACAAATTCCACATTCTAATTTTCATTACTCTTTTTTT
TTTTCGGGGAATAAAATAATGTGCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATTCCATTTCCAAATGGCGATTCACACGGCGGCGCTCAAGCACATTCTCAGACGCTGCACCAGCCTAGGGCGGAAGCAAGAGGCGGCGCCGCCCGGATACGACGACGTTC
CGAAGGGGCATTTCGCCGTGTACGTCGGCGACAATCGGAGCCGACATGTCGTTCCGATCTCGCTGTTGACTCACCCCGATTTTCAGTCCCTCCTCCGCCTTGCCGAGGAG
GAATTTGGCTTCCGCCACCACATGGGACTCACTATTCCCTGTGAAGAGGTGCTTTTCCGGTCACTCACCGCTGCCCACCAAAATGCACAAATTCCACATTCTAATTTTCA
TTACTCTTTTTTTTTTTCGGGGAATAAAATAATGTGCAACTAA
Protein sequenceShow/hide protein sequence
MAIHTAALKHILRRCTSLGRKQEAAPPGYDDVPKGHFAVYVGDNRSRHVVPISLLTHPDFQSLLRLAEEEFGFRHHMGLTIPCEEVLFRSLTAAHQNAQIPHSNFHYSFF
FSGNKIMCN