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Sed0021833 (gene) of Chayote v1 genome

Gene IDSed0021833
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG11:26476509..26476937
RNA-Seq ExpressionSed0021833
SyntenySed0021833
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598502.1 hypothetical protein SDJN03_08280, partial [Cucurbita argyrosperma subsp. sororia]5.7e-6085.92Show/hide
Query:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWA+QA+ASI PPP PLLAILGILV+LLSVSSFS++RSQVK T INFKLFFLLLPLVFVFVGNSIVRYGR VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV

Query:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY
         +   ASP G  VLL+VLLVLISYQPYFHS+WFPAIWRPYYY
Subjt:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY

KAG7020455.1 hypothetical protein SDJN02_17139, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-6587.32Show/hide
Query:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV
        MGWLIRERRGP+WKQGWA+QALASIAPPP PLLA+LGILV+LLSVSS+S+YRSQVKRT +NFK+FFLLLPLVFVFVGNSIVRYGR VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV

Query:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY
        AEG  ASPWGA  LL+VLLVLISYQPYFHS+WFP+IWRPYYY
Subjt:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY

KAG7029438.1 hypothetical protein SDJN02_07777, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-6085.92Show/hide
Query:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWA+QA+ASI PPP PLLAILGILV+LLSVSSFS +RSQVK T INFKLFFLLLPLVFVFVGNSIVRYGR VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV

Query:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY
         +   ASP G  VLL+VLLVLISYQPYFHS+WFPAIWRPYYY
Subjt:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY

XP_031737284.1 uncharacterized protein LOC116402215 [Cucumis sativus]1.5e-6387.41Show/hide
Query:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWA+QAL+SI PPP PLLAILGILV+LLSVSS+S+YRSQVK+T INFKLFFLLLPLVFVFVGNSIVRYGR VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV

Query:  AEG-GGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY
         EG   ASPWGA VLL+VLLVL+SYQPYFHS+WFPAIWRPYYY
Subjt:  AEG-GGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY

XP_041018444.1 uncharacterized protein LOC121260573 [Juglans microcarpa x Juglans regia]2.3e-4057.86Show/hide
Query:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV
        MGW +RERRGPAWK GW +Q LASI+PPP PL+AI GI+VLLL ++S++TYRSQ+++T I FKLF  LLP++ +F+ +SI +YGR VI  P TK + V+ 
Subjt:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV

Query:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPY
        AE  G  PWG  +L++VL++++SYQPYFHS W+P IW  Y
Subjt:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPY

TrEMBL top hitse value%identityAlignment
A0A0A0LNS9 Uncharacterized protein7.1e-6487.41Show/hide
Query:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWA+QAL+SI PPP PLLAILGILV+LLSVSS+S+YRSQVK+T INFKLFFLLLPLVFVFVGNSIVRYGR VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV

Query:  AEG-GGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY
         EG   ASPWGA VLL+VLLVL+SYQPYFHS+WFPAIWRPYYY
Subjt:  AEG-GGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY

A0A5A7VAG3 Uncharacterized protein7.1e-6487.41Show/hide
Query:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV
        MGWLIRERRGPAWKQGWA+QAL+SI PPP PLLAILGILV+LLSVSS+S+YRSQVK+T INFKLFFLLLPLVFVFVGNSIVRYGR VIITPRTKLEPVYV
Subjt:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV

Query:  AEG-GGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY
         EG   ASPWGA VLL+VLLVL+SYQPYFHS+WFPAIWRPYYY
Subjt:  AEG-GGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY

A0A5N6R8L3 Uncharacterized protein4.6e-3955.63Show/hide
Query:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV
        MGW +RERRGPAWKQGW +Q L SI+PPP PLL I GI+VLLL +SS++ Y+SQ+ +T INFK F  LLPL+ +FV + I +YGR VI+ P TK++ V+ 
Subjt:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV

Query:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY
        A+     PWG  +LL++L++++SYQ YFHS+W+P IW   YY
Subjt:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY

A0A6P9DT84 uncharacterized protein LOC1183438149.3e-4057.14Show/hide
Query:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV
        MGW  RERRGPAWK GW +Q LASI+PPP PL+AI GI+VLLL ++S+ TYRSQ+++T I FKLF  +LP++ +F+ +SI +YGR VI  P TK + V+ 
Subjt:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYV

Query:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPY
        AE  G  PWG  +L++VL++++SYQPYFHS W+P IW  Y
Subjt:  AEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPY

W9RNV3 Uncharacterized protein6.7e-3859.57Show/hide
Query:  MGWLIRE-RRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVY
        MGWLIRE R G +WK GW ++ LAS+  PP PLLAI+GI+V+LLSVSS++ Y+SQ+++T I F+LF LLLPLV +FV +S+ +YG  +++ PRTK E   
Subjt:  MGWLIRE-RRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVY

Query:  VAEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPY
        V+EGGG +PWG VVLL+VL VLISYQ YF S+W+P IW  Y
Subjt:  VAEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFPAIWRPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein3.3e-0533.04Show/hide
Query:  SIAPPPGPLLAILGIL-VLLLSVSSFSTYR-SQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYVAEG----GGASPWGAVVLLMV
        S++P P P+L IL +  V LLS   FS    ++     INF L  + L L+ +    S +     ++    +     YV+ G    GG+SPWG   L+++
Subjt:  SIAPPPGPLLAILGIL-VLLLSVSSFSTYR-SQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYVAEG----GGASPWGAVVLLMV

Query:  LLVLISYQPYFHSRW
        LLVL+ YQ  F   W
Subjt:  LLVLISYQPYFHSRW

AT5G19875.1 unknown protein3.0e-0630.84Show/hide
Query:  PGPLLAILGILV-LLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYVAEGGGASPWGAVVLLMVLLVLISYQPY
        P P L  L I+V  +LS + +  + S ++ T  + KL F+  PL  + + +     G      P  + + ++ A   G+SPWG   +L+++L ++SYQ  
Subjt:  PGPLLAILGILV-LLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYVAEGGGASPWGAVVLLMVLLVLISYQPY

Query:  FHSRWFP
        F  RWFP
Subjt:  FHSRWFP

AT5G42146.1 unknown protein9.9e-2642.96Show/hide
Query:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITP-RTKLEPVY
        MGW I+ERRG +WK+GW ++ L + + PP  LLA+L I+ LLL +SS+  Y+ +V++T+ N KLF L LP++FVFV  S+    R +  +    +     
Subjt:  MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITP-RTKLEPVY

Query:  VAEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFP
           G G  PWG +++L++LL+L+S Q YFHS W+P
Subjt:  VAEGGGASPWGAVVLLMVLLVLISYQPYFHSRWFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGTTGATAAGAGAGAGAAGAGGCCCAGCCTGGAAGCAAGGATGGGCAGATCAGGCCTTAGCCTCCATAGCTCCACCACCAGGGCCTCTGCTTGCAATACTTGG
AATTCTGGTCCTTTTGCTTTCTGTGTCATCATTTTCAACCTACAGGTCACAGGTGAAGAGAACAAGCATCAACTTTAAGCTCTTTTTCTTGCTTTTGCCTCTCGTGTTTG
TCTTTGTTGGAAACTCGATTGTTAGATATGGTCGCTTTGTGATCATCACGCCTAGAACGAAGCTCGAGCCGGTTTACGTCGCGGAAGGTGGTGGTGCCTCGCCTTGGGGT
GCGGTGGTTTTGCTGATGGTGTTGTTGGTTTTGATATCTTATCAGCCTTACTTCCACTCTAGATGGTTTCCAGCAATATGGAGACCGTATTATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGTTGATAAGAGAGAGAAGAGGCCCAGCCTGGAAGCAAGGATGGGCAGATCAGGCCTTAGCCTCCATAGCTCCACCACCAGGGCCTCTGCTTGCAATACTTGG
AATTCTGGTCCTTTTGCTTTCTGTGTCATCATTTTCAACCTACAGGTCACAGGTGAAGAGAACAAGCATCAACTTTAAGCTCTTTTTCTTGCTTTTGCCTCTCGTGTTTG
TCTTTGTTGGAAACTCGATTGTTAGATATGGTCGCTTTGTGATCATCACGCCTAGAACGAAGCTCGAGCCGGTTTACGTCGCGGAAGGTGGTGGTGCCTCGCCTTGGGGT
GCGGTGGTTTTGCTGATGGTGTTGTTGGTTTTGATATCTTATCAGCCTTACTTCCACTCTAGATGGTTTCCAGCAATATGGAGACCGTATTATTATTAA
Protein sequenceShow/hide protein sequence
MGWLIRERRGPAWKQGWADQALASIAPPPGPLLAILGILVLLLSVSSFSTYRSQVKRTSINFKLFFLLLPLVFVFVGNSIVRYGRFVIITPRTKLEPVYVAEGGGASPWG
AVVLLMVLLVLISYQPYFHSRWFPAIWRPYYY