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Sed0021841 (gene) of Chayote v1 genome

Gene IDSed0021841
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG09:2049922..2050244
RNA-Seq ExpressionSed0021841
SyntenySed0021841
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1258.75Show/hide
Query:  QADLVKIGREGFDLIDKFYGRSPAGRRAP--TPARQALPQPPRTAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR
        + DL KIGREGFDLID+++GR+PA RRA     AR ALPQ P  AEQ P  RKK E      N +Q AK RGG V+TTWR
Subjt:  QADLVKIGREGFDLIDKFYGRSPAGRRAP--TPARQALPQPPRTAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1258.97Show/hide
Query:  QADLVKIGREGFDLIDKFYGRSPAGRRAPTPARQALPQPPRTAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR
        +ADL KIGREGF+LID+++GR PA RR P  AR ALPQ P  AEQ P  RK  E    P N +Q A+ RGG V+TTWR
Subjt:  QADLVKIGREGFDLIDKFYGRSPAGRRAPTPARQALPQPPRTAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR

KGN47421.1 hypothetical protein Csa_021737 [Cucumis sativus]1.3e-0955.32Show/hide
Query:  MGLRDRE-IRAQADLVKIGREGFDLIDKFYGR--SPAGRR--APTPARQALPQPPR-TAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR
        MG R+RE I   A+L +IG EGF LIDKF+GR  +  GRR  A T  R A  QPPR  AEQ PS  K  E   A   SD  AKTRGG V+TTWR
Subjt:  MGLRDRE-IRAQADLVKIGREGFDLIDKFYGR--SPAGRR--APTPARQALPQPPR-TAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR

KGN47422.1 hypothetical protein Csa_021740 [Cucumis sativus]2.3e-1458.89Show/hide
Query:  LRDREIR-AQADLVKIGREGFDLIDKFYGRSP---AGRRAPTPARQALPQPPRTAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR
        LR+REIR ++ DL KIGREGF +ID+++GR+    A R A   AR ALPQPPR AEQ P IRK  E P+A   SDQ AK  GG V+TTWR
Subjt:  LRDREIR-AQADLVKIGREGFDLIDKFYGRSP---AGRRAPTPARQALPQPPRTAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR

XP_023548315.1 multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]3.3e-0556.06Show/hide
Query:  QADLVKIGREGFDLIDKFYGRSPAGRRAPTPA--RQALPQPPRTAEQTPSIRKKNEIPMAPENSDQ
        +ADL KIGREGF+LID+++GR PA RRA   A  R ALPQ P  AEQ P  RK  E    P N +Q
Subjt:  QADLVKIGREGFDLIDKFYGRSPAGRRAPTPA--RQALPQPPRTAEQTPSIRKKNEIPMAPENSDQ

TrEMBL top hitse value%identityAlignment
A0A0A0KG95 Uncharacterized protein1.1e-1458.89Show/hide
Query:  LRDREIR-AQADLVKIGREGFDLIDKFYGRSP---AGRRAPTPARQALPQPPRTAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR
        LR+REIR ++ DL KIGREGF +ID+++GR+    A R A   AR ALPQPPR AEQ P IRK  E P+A   SDQ AK  GG V+TTWR
Subjt:  LRDREIR-AQADLVKIGREGFDLIDKFYGRSP---AGRRAPTPARQALPQPPRTAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR

A0A0A0KI19 Uncharacterized protein6.3e-1055.32Show/hide
Query:  MGLRDRE-IRAQADLVKIGREGFDLIDKFYGR--SPAGRR--APTPARQALPQPPR-TAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR
        MG R+RE I   A+L +IG EGF LIDKF+GR  +  GRR  A T  R A  QPPR  AEQ PS  K  E   A   SD  AKTRGG V+TTWR
Subjt:  MGLRDRE-IRAQADLVKIGREGFDLIDKFYGR--SPAGRR--APTPARQALPQPPR-TAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGAGAGACAGAGAAATTAGGGCTCAAGCAGATTTGGTGAAGATTGGGAGAGAAGGATTTGACCTAATTGACAAATTCTACGGTCGGTCACCGGCGGGAAGACG
GGCACCAACACCGGCGAGGCAGGCGCTGCCGCAACCGCCGCGTACGGCGGAGCAAACTCCTTCAATAAGGAAGAAGAATGAAATTCCGATGGCGCCGGAGAACTCCGATC
AGGCGGCGAAAACACGTGGTGGATTCGTGGTTACAACTTGGCGTATATAG
mRNA sequenceShow/hide mRNA sequence
CAACCATCACAAAAACAAATTCCAAAAAAAAAAAAACTCTCCTTTTGCAAATTATGGGTTTGAGAGACAGAGAAATTAGGGCTCAAGCAGATTTGGTGAAGATTGGGAGA
GAAGGATTTGACCTAATTGACAAATTCTACGGTCGGTCACCGGCGGGAAGACGGGCACCAACACCGGCGAGGCAGGCGCTGCCGCAACCGCCGCGTACGGCGGAGCAAAC
TCCTTCAATAAGGAAGAAGAATGAAATTCCGATGGCGCCGGAGAACTCCGATCAGGCGGCGAAAACACGTGGTGGATTCGTGGTTACAACTTGGCGTATATAG
Protein sequenceShow/hide protein sequence
MGLRDREIRAQADLVKIGREGFDLIDKFYGRSPAGRRAPTPARQALPQPPRTAEQTPSIRKKNEIPMAPENSDQAAKTRGGFVVTTWRI