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Sed0021859 (gene) of Chayote v1 genome

Gene IDSed0021859
OrganismSechium edule (Chayote v1)
DescriptionLEA_2 domain-containing protein
Genome locationLG05:28584425..28584890
RNA-Seq ExpressionSed0021859
SyntenySed0021859
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR40256.1 hypothetical protein CICLE_v10026796mg [Citrus clementina]1.4e-0840.95Show/hide
Query:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF
        +  C    YV+RG+  V      + G ++P     RWR LWR++K  K  +     G    HVPY+P TY QNFD+G V     D D  SRSFSARFA+ 
Subjt:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF

Query:  QRPAQ
         R  Q
Subjt:  QRPAQ

GAY51209.1 hypothetical protein CUMW_132530 [Citrus unshiu]4.8e-0941.9Show/hide
Query:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF
        +  C    YVKRG+  V      + G ++P     RWR LWR++K  K  +     G  + HVPY+P TY QNFD+G V     D D  SRSFSARFA+ 
Subjt:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF

Query:  QRPAQ
         R  Q
Subjt:  QRPAQ

KAG6606769.1 hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2358.06Show/hide
Query:  MELSFLRRFCGGSGYVKRGHY-PVAVAVLGRRSPEKRAARWRALWRRLKK-IGMLSSCG--GPREAHVPYNPQTYLQNFDEGSVMVIG-DDLDAVSRSFS
        M LS LR   GG GYV+RG+Y  V VAVL     EK  +RWR +WRRLKK    +  CG  G RE HVPYNP+TYLQNFD+GSVM++G DD DA+SRSFS
Subjt:  MELSFLRRFCGGSGYVKRGHY-PVAVAVLGRRSPEKRAARWRALWRRLKK-IGMLSSCG--GPREAHVPYNPQTYLQNFDEGSVMVIG-DDLDAVSRSFS

Query:  ARFAIF-----QRPAQFVVHKVNV
        ARFAI      + P +FVV K+ V
Subjt:  ARFAIF-----QRPAQFVVHKVNV

KAG7036482.1 hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2359.02Show/hide
Query:  MELSFLRRFCGGSGYVKRGHY-PVAVAVLGRRSPEKRAARWRALWRRLKK-IGMLSSCG--GPREAHVPYNPQTYLQNFDEGSVMVIG-DDLDAVSRSFS
        M LS LR   GG GYV+RG+Y  V VAVL     EK  ARWR +WRRLKK    +  CG  G RE HVPYNP+TYLQNFD+GSVM++G DD DA+SRSFS
Subjt:  MELSFLRRFCGGSGYVKRGHY-PVAVAVLGRRSPEKRAARWRALWRRLKK-IGMLSSCG--GPREAHVPYNPQTYLQNFDEGSVMVIG-DDLDAVSRSFS

Query:  ARFAIF-----QRPAQFVVHKV
        ARFAI      + P +FVV K+
Subjt:  ARFAIF-----QRPAQFVVHKV

KDO51221.1 hypothetical protein CISIN_1g044132mg [Citrus sinensis]1.1e-0841.9Show/hide
Query:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF
        +  C    YVKRG+  V      + G ++P     RWR LWR++K  K  +     G    HVPY+P TY QNFD+G V     D D  SRSFSARFA+ 
Subjt:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF

Query:  QRPAQ
         R  Q
Subjt:  QRPAQ

TrEMBL top hitse value%identityAlignment
A0A067EJZ4 Uncharacterized protein5.2e-0941.9Show/hide
Query:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF
        +  C    YVKRG+  V      + G ++P     RWR LWR++K  K  +     G    HVPY+P TY QNFD+G V     D D  SRSFSARFA+ 
Subjt:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF

Query:  QRPAQ
         R  Q
Subjt:  QRPAQ

A0A2H5PFR9 Uncharacterized protein2.3e-0941.9Show/hide
Query:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF
        +  C    YVKRG+  V      + G ++P     RWR LWR++K  K  +     G  + HVPY+P TY QNFD+G V     D D  SRSFSARFA+ 
Subjt:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF

Query:  QRPAQ
         R  Q
Subjt:  QRPAQ

A0A5C7IIL3 Uncharacterized protein9.8e-0840.78Show/hide
Query:  FCGGSGYVKRGH---YPVAVAVLGRRSPEKRAARWRALWRRLKK-----IGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAI
        FC    YVK G+     +   V G   P      WR LWR++K+         SS       HVPY+P TY QNFD+G +     D D VSRSFSARFA+
Subjt:  FCGGSGYVKRGH---YPVAVAVLGRRSPEKRAARWRALWRRLKK-----IGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAI

Query:  FQR
          R
Subjt:  FQR

M0U645 Uncharacterized protein9.8e-0856.92Show/hide
Query:  ARWRALWRRL--KKIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAI
        +RWR LWRR+  +K  MLSS       H+PY+P TY QNFDEGS  V  D+L   SRSFSARFA+
Subjt:  ARWRALWRRL--KKIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAI

V4ST02 Uncharacterized protein6.8e-0940.95Show/hide
Query:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF
        +  C    YV+RG+  V      + G ++P     RWR LWR++K  K  +     G    HVPY+P TY QNFD+G V     D D  SRSFSARFA+ 
Subjt:  RRFCGGSGYVKRGHYPVAV---AVLGRRSPEKRAARWRALWRRLK--KIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIF

Query:  QRPAQ
         R  Q
Subjt:  QRPAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGAGTTTTTTAAGGCGCTTCTGCGGCGGTTCCGGGTACGTGAAAAGAGGGCACTACCCGGTGGCGGTGGCTGTTCTGGGGCGGCGGTCGCCGGAGAAGAGGGC
GGCGCGTTGGAGAGCGCTGTGGCGGCGGCTGAAGAAGATCGGAATGTTGAGCAGCTGCGGTGGGCCACGTGAGGCGCACGTGCCGTACAATCCACAGACTTATTTGCAGA
ACTTCGATGAAGGTTCTGTGATGGTGATCGGAGATGATCTGGACGCCGTTTCTCGATCTTTCTCGGCCCGGTTCGCCATTTTTCAACGGCCGGCTCAGTTTGTGGTTCAT
AAAGTTAATGTTTAG
mRNA sequenceShow/hide mRNA sequence
TGACACCTCTCTCCACTCTTCCCATTTCACATTCTTTTTCATCTAAATAATATTACCAAAAAATAAATTTTAAAAAAAACCCCAAAATTTCAAATCCCCTGTTTTTCTCT
TGAAACCCAAAATGGAATTGAGTTTTTTAAGGCGCTTCTGCGGCGGTTCCGGGTACGTGAAAAGAGGGCACTACCCGGTGGCGGTGGCTGTTCTGGGGCGGCGGTCGCCG
GAGAAGAGGGCGGCGCGTTGGAGAGCGCTGTGGCGGCGGCTGAAGAAGATCGGAATGTTGAGCAGCTGCGGTGGGCCACGTGAGGCGCACGTGCCGTACAATCCACAGAC
TTATTTGCAGAACTTCGATGAAGGTTCTGTGATGGTGATCGGAGATGATCTGGACGCCGTTTCTCGATCTTTCTCGGCCCGGTTCGCCATTTTTCAACGGCCGGCTCAGT
TTGTGGTTCATAAAGTTAATGTTTAG
Protein sequenceShow/hide protein sequence
MELSFLRRFCGGSGYVKRGHYPVAVAVLGRRSPEKRAARWRALWRRLKKIGMLSSCGGPREAHVPYNPQTYLQNFDEGSVMVIGDDLDAVSRSFSARFAIFQRPAQFVVH
KVNV