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Sed0021863 (gene) of Chayote v1 genome

Gene IDSed0021863
OrganismSechium edule (Chayote v1)
DescriptionGamma-thionin family protein
Genome locationLG09:28060364..28061208
RNA-Seq ExpressionSed0021863
SyntenySed0021863
Gene Ontology termsNA
InterPro domainsIPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH10080.1 Gamma-thionin family protein [Prunus dulcis]3.9e-0750.7Show/hide
Query:  SPVNQSSFLFIHCIVFLLLAG--NAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN
        SP  Q+   F+ CI  LL +G   AI  P+VCLG CS F +C  ACI K   +GG C+GF G  P TCCCN
Subjt:  SPVNQSSFLFIHCIVFLLLAG--NAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN

KAG6575964.1 hypothetical protein SDJN03_26603, partial [Cucurbita argyrosperma subsp. sororia]4.0e-1252.5Show/hide
Query:  MASSPVNQSSFLFIHCIVFLLLA------GNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCNNT
        MASS   +SSF F+ C+ F+L+A      G+AI+L +VCLG CS  PNC  ACI  G  KGG+CLGF    P +CCCN+T
Subjt:  MASSPVNQSSFLFIHCIVFLLLA------GNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCNNT

PQM37547.1 hypothetical protein Pyn_28290 [Prunus yedoensis var. nudiflora]5.1e-0752.05Show/hide
Query:  SPVNQSSFLFIHCIVFLL--LAGNA--ISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN
        SP  Q+   F+ C  FLL  +AG A  I +P+VCLG CS F +C  ACI K   KGG C+GF G  P TCCCN
Subjt:  SPVNQSSFLFIHCIVFLL--LAGNA--ISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN

PQP91989.1 hypothetical protein Pyn_22178 [Prunus yedoensis var. nudiflora]8.7e-0747.06Show/hide
Query:  NQSSFLFIHCIVFLL--LAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN
        ++  +L +HC  F     A   I +P+VCLG CS F +C  ACI K   KGG C+GF G  P TCCCN
Subjt:  NQSSFLFIHCIVFLL--LAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN

PQQ20068.1 hypothetical protein Pyn_07002 [Prunus yedoensis var. nudiflora]8.7e-0747.06Show/hide
Query:  NQSSFLFIHCIVFLL--LAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN
        ++  +L +HC  F     A   I +P+VCLG CS F +C  ACI K   KGG C+GF G  P TCCCN
Subjt:  NQSSFLFIHCIVFLL--LAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN

TrEMBL top hitse value%identityAlignment
A0A314UJ84 Uncharacterized protein2.5e-0752.05Show/hide
Query:  SPVNQSSFLFIHCIVFLL--LAGNA--ISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN
        SP  Q+   F+ C  FLL  +AG A  I +P+VCLG CS F +C  ACI K   KGG C+GF G  P TCCCN
Subjt:  SPVNQSSFLFIHCIVFLL--LAGNA--ISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN

A0A314XIU0 Uncharacterized protein4.2e-0747.06Show/hide
Query:  NQSSFLFIHCIVFLL--LAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN
        ++  +L +HC  F     A   I +P+VCLG CS F +C  ACI K   KGG C+GF G  P TCCCN
Subjt:  NQSSFLFIHCIVFLL--LAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN

A0A314ZS27 Uncharacterized protein4.2e-0747.06Show/hide
Query:  NQSSFLFIHCIVFLL--LAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN
        ++  +L +HC  F     A   I +P+VCLG CS F +C  ACI K   KGG C+GF G  P TCCCN
Subjt:  NQSSFLFIHCIVFLL--LAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN

A0A4Y1S039 Gamma-thionin family protein1.9e-0750.7Show/hide
Query:  SPVNQSSFLFIHCIVFLLLAG--NAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN
        SP  Q+   F+ CI  LL +G   AI  P+VCLG CS F +C  ACI K   +GG C+GF G  P TCCCN
Subjt:  SPVNQSSFLFIHCIVFLLLAG--NAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN

A0A6J5VUM4 Uncharacterized protein5.5e-0750Show/hide
Query:  MASSPVNQSSFLFIHCIVFLL--LAG--NAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN
        ++S+  N   FL   CI  LL  +AG   AI  P+VCLG CS F +C  ACI K   KGG C+GF G  P TCCCN
Subjt:  MASSPVNQSSFLFIHCIVFLL--LAG--NAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56233.1 Protein of unknown function (PD694200)1.9e-0438.81Show/hide
Query:  PVNQSSFLFIHCIVFLLLAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCC
        P+  SS +    I+  +++G +   P+ C GAC+S P C K C  KG+ K G C G S H    CCC
Subjt:  PVNQSSFLFIHCIVFLLLAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCCCTGTCAATCAATCTTCATTCCTCTTCATCCATTGTATTGTTTTTCTTCTCCTCGCTGGAAATGCCATAAGTTTACCATTGGTGTGTTTGGGAGCATG
CTCAAGTTTCCCAAATTGTACCAAAGCTTGCATCATTAAAGGATTTGTGAAAGGTGGGGATTGTTTGGGCTTCTCTGGACACTCTCCTACTACTTGTTGTTGCAACAACA
CTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCCCCTGTCAATCAATCTTCATTCCTCTTCATCCATTGTATTGTTTTTCTTCTCCTCGCTGGAAATGCCATAAGTTTACCATTGGTGTGTTTGGGAGCATG
CTCAAGTTTCCCAAATTGTACCAAAGCTTGCATCATTAAAGGATTTGTGAAAGGTGGGGATTGTTTGGGCTTCTCTGGACACTCTCCTACTACTTGTTGTTGCAACAACA
CTAATTAA
Protein sequenceShow/hide protein sequence
MASSPVNQSSFLFIHCIVFLLLAGNAISLPLVCLGACSSFPNCTKACIIKGFVKGGDCLGFSGHSPTTCCCNNTN