; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0021871 (gene) of Chayote v1 genome

Gene IDSed0021871
OrganismSechium edule (Chayote v1)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein isoform 1
Genome locationLG12:24901266..24902127
RNA-Seq ExpressionSed0021871
SyntenySed0021871
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588215.1 hypothetical protein SDJN03_16780, partial [Cucurbita argyrosperma subsp. sororia]9.0e-9180.79Show/hide
Query:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL
        MGNS+SPC H ISTT   RSSAV LIFS G+T++LTG+HHIAGEIMFQFPDMMICHADSFFIGHPIPSL I+D+LL G TYFVLPI+ FAS DVLSTSSL
Subjt:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL

Query:  AAIGSGNAKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQ
        A+IG+GNAKFS Q PFEYIR  NG+++I++VPEFL+R+IS AA EG GG FLCSTPEL+KHYDQLVGSTKGQVWSPKLESISEYKIRYSPC+FVGFKVKQ
Subjt:  AAIGSGNAKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQ

Query:  KEG
        KEG
Subjt:  KEG

KAG7022114.1 hypothetical protein SDJN02_15843, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-9381.28Show/hide
Query:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL
        MGNS+SPC H ISTTH  RSSAV LIFS G+T++LTG+HHIAGEIMFQFPDMMICHADSFFIGHPIPSL I+D+LL G TYFVLPI+ FAS DVLSTSSL
Subjt:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL

Query:  AAIGSGNAKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQ
        A+IG+ NAKFS Q PFEYIR  NG+++I++VPEFL+R+IS AA EGGGG FLCSTPEL+KHYDQLVGSTKGQVWSPKLESISEYKIRYSPC+FVGFKVKQ
Subjt:  AAIGSGNAKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQ

Query:  KEG
        KEG
Subjt:  KEG

XP_022927424.1 uncharacterized protein LOC111434251 [Cucurbita moschata]6.2e-9280.79Show/hide
Query:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL
        MGNS+SPC H ISTT    SSAV LIFS G+T++LTG+HHIAGEIMFQFPDMMICHADSFFIGHPIPSL I+D+LL G TYFVLPI+ FAS DVLSTSSL
Subjt:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL

Query:  AAIGSGNAKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQ
        A+IG+GNAKFS Q PFEYIR  NG+++I++VPEFL+R+IS AA EGGGG FLCSTPEL+KHYDQLVGSTKGQVWSPKLESISEYKIRYSPC+FVGFKVKQ
Subjt:  AAIGSGNAKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQ

Query:  KEG
        KEG
Subjt:  KEG

XP_023530355.1 uncharacterized protein LOC111792953 [Cucurbita pepo subsp. pepo]3.1e-9179.8Show/hide
Query:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL
        MGNS+SPC H ISTT   RSSAV LIFS G+T++LTG+HHIAGEIMFQFPDMMICHADSFFIGHPIPSL I+D+L+ G TYFV+PI+ FAS DVLSTSSL
Subjt:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL

Query:  AAIGSGNAKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQ
        A+IG+GNAKFS Q PFEYIR  NG+++I++VPEFL+R+IS AA E GGG FLCSTPEL+KHYDQLVGSTKGQVWSPKLESISEYKIRYSPC+FVGFKVKQ
Subjt:  AAIGSGNAKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQ

Query:  KEG
        KEG
Subjt:  KEG

XP_038880154.1 uncharacterized protein LOC120071833 [Benincasa hispida]8.2e-8472.99Show/hide
Query:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL
        MGN+ SPCF +IS +H  R+SAV+LIFS G T+ L G+HH+AGEIMFQFPDMM+CHA+SFFIGHPIPSL I D+LL G TY VLPI+ FAS+DVLSTSSL
Subjt:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL

Query:  AAIGSGNA---KFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAA-----AEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCR
        A I +GNA   KFS  CPFEY+R  NG+VLI+V+PEF++R+IS AA      +GGGGGFLCSTPELKKHYDQLVG++KGQVWSPKLE+ISEYKIRYSPCR
Subjt:  AAIGSGNA---KFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAA-----AEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCR

Query:  FVGFKVKQKEG
        FVGFK+KQKEG
Subjt:  FVGFKVKQKEG

TrEMBL top hitse value%identityAlignment
A0A0A0LZV5 Uncharacterized protein1.3e-8271.7Show/hide
Query:  MGNSISPCFHTISTTHL-SRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSS
        MGN++SPC  +IS +    R S V+L+F+ G T+ L GDHH AGEIMFQFPDMM+CHA+SFFIGHPIPSL I+D+L+ G TY +LPI+ FAS+DVLSTSS
Subjt:  MGNSISPCFHTISTTHL-SRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSS

Query:  LAAIGSGN---AKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAA-----AEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPC
        LA IG+GN    KFS  CPFEY+R  NGKVLI+V+PEF++R+IS AA     +EGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLE+ISEYKIRYSPC
Subjt:  LAAIGSGN---AKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAA-----AEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A1S3BP11 uncharacterized protein LOC1034919832.4e-8171.7Show/hide
Query:  MGNSISPCFHTIS-TTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSS
        MGN++SPC  +IS +    R SAV+L+F+ G T+ L G+HH AGEIMFQFPDMM+CHA+SFFIGHPIPSL I+D LL G TY VLPI+ FAS+DVLSTSS
Subjt:  MGNSISPCFHTIS-TTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSS

Query:  LAAIGSGN---AKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAE-----GGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPC
        LA IG+GN    KFS  CPFEY+R  NG+VLI+V+PEF++R+IS AA +     GGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLE+ISEYKIRYSPC
Subjt:  LAAIGSGN---AKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAE-----GGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A5A7UN34 DUF4228 domain protein3.1e-8171.7Show/hide
Query:  MGNSISPCFHTIS-TTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSS
        MGN++SPC  +IS +    R SAV+L+F+ G T+ L G+HH AGEIMFQFPDMM+CHA+SFFIGHPIPSL I+D LL G TY VLPI+ FAS+DVLSTSS
Subjt:  MGNSISPCFHTIS-TTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSS

Query:  LAAIGSGN---AKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAE-----GGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPC
        LA IG+GN    KFS  CPFEY+R  NG+VLI+V+PEF++R+IS AA +     GGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLE+ISEYKIRYSPC
Subjt:  LAAIGSGN---AKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAE-----GGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A6J1EHY7 uncharacterized protein LOC1114342513.0e-9280.79Show/hide
Query:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL
        MGNS+SPC H ISTT    SSAV LIFS G+T++LTG+HHIAGEIMFQFPDMMICHADSFFIGHPIPSL I+D+LL G TYFVLPI+ FAS DVLSTSSL
Subjt:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL

Query:  AAIGSGNAKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQ
        A+IG+GNAKFS Q PFEYIR  NG+++I++VPEFL+R+IS AA EGGGG FLCSTPEL+KHYDQLVGSTKGQVWSPKLESISEYKIRYSPC+FVGFKVKQ
Subjt:  AAIGSGNAKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQ

Query:  KEG
        KEG
Subjt:  KEG

A0A6J1HB88 uncharacterized protein LOC1114617447.0e-8172.95Show/hide
Query:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL
        MGN++SPC    S T+  RSSAV+LIFS G TR L G HH AGEIMFQFPDM++CHADSFFIGH IPSL IED+LL G TY VLPI+ F+  DVLSTSSL
Subjt:  MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSL

Query:  AAIGSGN---AKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGG-GGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGF
        AAIG+GN    KFS  CPFEY+R  NGK LI+V+PEF++R++S   A GG GGGFLCSTPELKKHYDQLVG++KGQVWSP LE+ISEYKIRYSPCRFVGF
Subjt:  AAIGSGN---AKFSDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGG-GGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28190.1 unknown protein5.2e-1233.74Show/hide
Query:  IAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFAS-LDVLSTSSLAAIGSGN--AKFSDQCPFEYIRSANGK---VLIRVVPEF
        +  E+   FP   IC +D  +IG   P L   + L  G  YF+LP + F + L  L+ ++L    +G    K + Q P  ++     K   + IRV  EF
Subjt:  IAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFAS-LDVLSTSSLAAIGSGN--AKFSDQCPFEYIRSANGK---VLIRVVPEF

Query:  LI---------RVISSAAAEGGGG---GFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYK
        +          RV      E GGG   G +C+T +LKK Y QLVG  +   W PKLE+I+E K
Subjt:  LI---------RVISSAAAEGGGG---GFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYK

AT5G12340.1 unknown protein4.4e-4346.43Show/hide
Query:  MGNS-ISPCFHTISTTHLSRSSAVRLIFSGGL-TRTLTG-DHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLST
        MG S I+ CF  I      R   V L+F   + T+TL G   H+AGEIMF+FPD ++CHADSF+IG  IP+L ++D L+PG+TYFVLPIE F    +L+T
Subjt:  MGNS-ISPCFHTISTTHLSRSSAVRLIFSGGL-TRTLTG-DHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLST

Query:  SSLAAIGSG--NAKF----------SDQCPFEYIRSANGKVLIRVVPEFLIRVI-------SSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKL
        S L+   S   N +           S   PFEY +  NGK+LI+V PEF+I +I          A   G    +C++PELKK YDQLVG T+  +WSP L
Subjt:  SSLAAIGSG--NAKF----------SDQCPFEYIRSANGKVLIRVVPEFLIRVI-------SSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKL

Query:  ESISEYKIRYSPCRFVGFKVKQKE
        ++ISE+KIR SP RF G   KQ E
Subjt:  ESISEYKIRYSPCRFVGFKVKQKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTCAATCTCTCCATGTTTTCATACCATTTCCACCACCCACCTCAGCCGCTCCTCCGCCGTTAGACTCATCTTTTCCGGCGGCCTCACCAGAACCCTCACCGG
GGACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCAGACATGATGATCTGCCACGCTGATTCCTTCTTCATCGGCCACCCGATCCCATCCTTGGTCATCGAAGACC
GCCTCCTCCCCGGCCGAACCTACTTCGTTCTCCCGATCGAGAGCTTCGCCTCCCTTGACGTCCTCTCAACGTCCTCACTTGCAGCGATTGGGTCCGGGAATGCAAAATTC
TCCGACCAATGCCCGTTTGAATACATCCGTAGCGCGAATGGGAAAGTCCTGATTCGGGTCGTGCCCGAGTTTCTTATTAGGGTTATTTCTTCAGCAGCAGCGGAGGGCGG
TGGAGGTGGCTTTTTGTGTAGTACGCCGGAGTTGAAGAAGCATTACGATCAGCTAGTGGGATCGACAAAAGGGCAAGTTTGGTCGCCCAAGTTGGAGAGTATTTCAGAGT
ACAAAATTAGGTATTCGCCTTGTAGATTTGTAGGGTTTAAAGTGAAGCAAAAAGAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTCAATCTCTCCATGTTTTCATACCATTTCCACCACCCACCTCAGCCGCTCCTCCGCCGTTAGACTCATCTTTTCCGGCGGCCTCACCAGAACCCTCACCGG
GGACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCAGACATGATGATCTGCCACGCTGATTCCTTCTTCATCGGCCACCCGATCCCATCCTTGGTCATCGAAGACC
GCCTCCTCCCCGGCCGAACCTACTTCGTTCTCCCGATCGAGAGCTTCGCCTCCCTTGACGTCCTCTCAACGTCCTCACTTGCAGCGATTGGGTCCGGGAATGCAAAATTC
TCCGACCAATGCCCGTTTGAATACATCCGTAGCGCGAATGGGAAAGTCCTGATTCGGGTCGTGCCCGAGTTTCTTATTAGGGTTATTTCTTCAGCAGCAGCGGAGGGCGG
TGGAGGTGGCTTTTTGTGTAGTACGCCGGAGTTGAAGAAGCATTACGATCAGCTAGTGGGATCGACAAAAGGGCAAGTTTGGTCGCCCAAGTTGGAGAGTATTTCAGAGT
ACAAAATTAGGTATTCGCCTTGTAGATTTGTAGGGTTTAAAGTGAAGCAAAAAGAAGGCTAAATAATCCACCATTTGAAGGGAATATTTATTGAACTTCTTCAAGATTTA
TGACGGGTAAAAAATGGCATTAAACCCAATGTTTTAAACTTGTTGTTCGGTCTTTTGGTGAAGCTTTCTGGCCACTATTTTTCTAGTCAAGGTAGCTAGCCATTATCCAA
ATATGAACTTATAGAGTGTATTGTGAAATGAATGCAACATATAATCTTTTACATGTAACAATGTTGTACTTTGTATTTATTTCTTTGAGGCC
Protein sequenceShow/hide protein sequence
MGNSISPCFHTISTTHLSRSSAVRLIFSGGLTRTLTGDHHIAGEIMFQFPDMMICHADSFFIGHPIPSLVIEDRLLPGRTYFVLPIESFASLDVLSTSSLAAIGSGNAKF
SDQCPFEYIRSANGKVLIRVVPEFLIRVISSAAAEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIRYSPCRFVGFKVKQKEG