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Sed0021895 (gene) of Chayote v1 genome

Gene IDSed0021895
OrganismSechium edule (Chayote v1)
DescriptionEF hand calcium-binding protein family
Genome locationLG13:22352446..22352754
RNA-Seq ExpressionSed0021895
SyntenySed0021895
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]8.1e-2472.62Show/hide
Query:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKY
        K+KT + R KLS+EQ+S IFRNHD DGDGRL  TELT AF YIGAFLPSYRA  AL H DSDGDGFI  ++FE LV+YAEKRKY
Subjt:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKY

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]6.2e-2470.11Show/hide
Query:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV
        KNK S+ R KLS+EQ+S IFRNHD DGDGRL  TELTEAF YIGAFLPSYRA  AL + DSD DGFI  ++FESLV+Y EKR Y +V
Subjt:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV

KAG6608482.1 Polcalcin Syr v 3, partial [Cucurbita argyrosperma subsp. sororia]7.1e-2874.16Show/hide
Query:  KEKNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV
        +EK+K SKKR+KLS+EQ+S IFRNHD DGDGRL P+ELTEAF YIG+F+PSYRA KAL+HADS+ DGFI+ EEFE L++YAEKRKY VV
Subjt:  KEKNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2471.26Show/hide
Query:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV
        K+KT + R KLS+EQ+S IFRNHD DGDGRL  TELT AF YIGAFLPSYRA  AL H DSDGDGFI  ++FE LV+YAEKRKY V+
Subjt:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]9.0e-2366.67Show/hide
Query:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV
        K+K    R KLS+EQ+  IFRNHD D DGRL  TELTEAF YIGAFLP+YRAR AL HADSD DGFI  ++FESLV+YAE+R+Y ++
Subjt:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein4.4e-2366.67Show/hide
Query:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV
        K+K    R KLS+EQ+  IFRNHD D DGRL  TELTEAF YIGAFLP+YRAR AL HADSD DGFI  ++FESLV+YAE+R+Y ++
Subjt:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV

A0A5A7UYC0 Putative calcium-binding protein CML104.8e-1452.7Show/hide
Query:  RTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEK
        + +LS+E I  IFR HD DGDGRL  +E+ +AF + G+ LP Y+A   + HAD +GDG+I  EE + LVDYAEK
Subjt:  RTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEK

A0A5A7VDB9 Putative calcium-binding protein CML271.3e-2266.67Show/hide
Query:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV
        ++KT   R +LS+EQ+  IFRNHD D DGRL  TELTEAF YIGAFLP YRAR AL HADSD DGFIS ++FE LV+YAE+R+Y V+
Subjt:  KNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV

A0A6J1GK16 calmodulin-like3.7e-1456.94Show/hide
Query:  KLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEK
        KLS+ QI  IF  HD DGDG L  +ELT+AF + G+ +P Y+A   L +AD+DGDG IS EE E LVDYAE+
Subjt:  KLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEK

A0A6J1KUW2 calmodulin-like3.7e-1456.94Show/hide
Query:  KLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEK
        KLS+ QI  IF  HD DGDG L  +ELT+AF + G+ +P Y+A   L +AD+DGDG IS EE E LVDYAE+
Subjt:  KLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEK

SwissProt top hitse value%identityAlignment
O22845 Calmodulin-like protein 53.6e-0629.73Show/hide
Query:  NKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL
        + +S    ++   ++ R+F+  DK+GDGR+   EL ++   +G ++P     + +   D++GDG + ++EFESL
Subjt:  NKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL

Q03975 Calcium-binding protein LPS1-beta (Fragment)2.1e-0639.39Show/hide
Query:  KRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEF
        K    S ++I ++F + DKDG+GR+ P EL++    I   L    A K +  AD DGDG +++EEF
Subjt:  KRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEF

Q6L4D4 Probable calcium-binding protein CML159.4e-0735.21Show/hide
Query:  SKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL
        +K R   ++++  R+FR  D +GDGR+   EL   F  +G  +      + +  ADSDGDG+IS+ EF ++
Subjt:  SKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL

Q8RZB5 Probable calcium-binding protein CML107.2e-0739.68Show/hide
Query:  KEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL
        +E++ R+FR  D +GDGR+  +EL   F  +G         + +  AD+DGDGFIS++EF +L
Subjt:  KEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL

Q9ZR02 Calmodulin-like protein 61.6e-0633.85Show/hide
Query:  LSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL
        +   +++R+F+  DKDGDG++   EL E+F  +G  +P     + +   D +GDG + +EEF  L
Subjt:  LSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL

Arabidopsis top hitse value%identityAlignment
AT2G43290.1 Calcium-binding EF-hand family protein2.5e-0729.73Show/hide
Query:  NKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL
        + +S    ++   ++ R+F+  DK+GDGR+   EL ++   +G ++P     + +   D++GDG + ++EFESL
Subjt:  NKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL

AT3G25600.1 Calcium-binding EF-hand family protein7.4e-0734.85Show/hide
Query:  LSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLV
        +++EQ+  +FR+ D+DG+G +   EL  +   +G  L      + +T ADS+GDG IS  EF  ++
Subjt:  LSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLV

AT3G59440.1 Calcium-binding EF-hand family protein3.3e-0735.94Show/hide
Query:  SKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL
        S   + R+F+  DK+GDGR+   EL ++   +G F+P     + +   D++GDG + + EFESL
Subjt:  SKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL

AT4G03290.1 EF hand calcium-binding protein family1.1e-0733.85Show/hide
Query:  LSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL
        +   +++R+F+  DKDGDG++   EL E+F  +G  +P     + +   D +GDG + +EEF  L
Subjt:  LSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL

AT4G12860.1 EF hand calcium-binding protein family5.6e-0732.31Show/hide
Query:  LSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL
        + + ++SR+F+  DK+GDG++   EL + F  +G  +P     + +   D +GDG + ++EF SL
Subjt:  LSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCATCGAAATTGTAGAGGTGGAAGAGAAAAAGAAAGAGAAAAACAAGACGTCCAAGAAGAGGACGAAGCTATCAAAAGAGCAAATAAGCAGAATCTTCAGAAA
CCACGACAAAGATGGCGATGGCCGCCTCGACCCCACCGAGCTCACGGAAGCCTTCTGCTATATCGGTGCCTTTCTCCCGTCGTATCGAGCTCGGAAGGCTCTTACTCATG
CCGATTCCGATGGAGATGGGTTCATCAGTGTGGAGGAATTCGAATCTCTCGTCGATTATGCTGAGAAACGCAAGTACCCCGTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCCATCGAAATTGTAGAGGTGGAAGAGAAAAAGAAAGAGAAAAACAAGACGTCCAAGAAGAGGACGAAGCTATCAAAAGAGCAAATAAGCAGAATCTTCAGAAA
CCACGACAAAGATGGCGATGGCCGCCTCGACCCCACCGAGCTCACGGAAGCCTTCTGCTATATCGGTGCCTTTCTCCCGTCGTATCGAGCTCGGAAGGCTCTTACTCATG
CCGATTCCGATGGAGATGGGTTCATCAGTGTGGAGGAATTCGAATCTCTCGTCGATTATGCTGAGAAACGCAAGTACCCCGTTGTTTGA
Protein sequenceShow/hide protein sequence
MNSIEIVEVEEKKKEKNKTSKKRTKLSKEQISRIFRNHDKDGDGRLDPTELTEAFCYIGAFLPSYRARKALTHADSDGDGFISVEEFESLVDYAEKRKYPVV