; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0021901 (gene) of Chayote v1 genome

Gene IDSed0021901
OrganismSechium edule (Chayote v1)
Descriptionhistone H1-like
Genome locationLG08:31162492..31164080
RNA-Seq ExpressionSed0021901
SyntenySed0021901
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599320.1 Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia]1.3e-6472.73Show/hide
Query:  MASAANPVVPSAAPVAVAAV------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL
        M+SAA+PV  S AP  VAAV            A A KA KAKKP+ AK++++S THP FF+MISEAIVSLKERTGSSQYAITKFSEEKHKQLP+NFRKLL
Subjt:  MASAANPVVPSAAPVAVAAV------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL

Query:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPKA----------KAVVIPKPKA
        LVHLKKLVAADK+VKVKNSYKLPSARS  A A  PV AKKP+S+K KA      AAVAKPKAKTAV KPK K AVAKPKA          KAV   K KA
Subjt:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPKA----------KAVVIPKPKA

Query:  AAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
        A KVKKVAPK KPAAK AKVAKTLSRTSPGKK A AAKAKKV AKKPK+VKSPARKVQARKVKK
Subjt:  AAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

XP_022142941.1 histone H1-like [Momordica charantia]2.6e-6570.79Show/hide
Query:  MASAANPVVPSAAPVAVAA------------VAPAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL
        MASAA+P+VPS AP A AA             A + KA KAKKP+ AK+ K+S THP FFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLP+NFRKLL
Subjt:  MASAANPVVPSAAPVAVAA------------VAPAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL

Query:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPKAKAVVIP-------------------K
        LVHLKKLVAADK+VKVKNSYKLPSARSIQAKA  PVAAKKP+S+K KAAA  K KA  AV KPK K+AV KPK KAVV P                   K
Subjt:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPKAKAVVIP-------------------K

Query:  PKAAAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
        PKAAAKV K A KAKPAA+ AKVAKTL++TSPGK+ A AAKAKKV AKKPK+VKSPARKVQARKVKK
Subjt:  PKAAAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

XP_022946127.1 histone H1-like [Cucurbita moschata]3.7e-6472.35Show/hide
Query:  MASAANPVVPSAAPVAVAAV------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL
        M+SAA+PV  S AP  VAAV            A A KA KAKKP+ AK++++S THP FF+MISEAIVSLKERTGSSQYAITKFSEEKHK+LP+NFRKLL
Subjt:  MASAANPVVPSAAPVAVAAV------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL

Query:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPK--AKAVVIPKPKAAA------
        LVHLKKLVAADK+VKVKNSYKLPSARS  A A  PV AKKP+S+K KA      AAVAKPKAKTAV KPK K AVAKPK  AK+ V+ KPKA A      
Subjt:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPK--AKAVVIPKPKAAA------

Query:  --KVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
          KVKKVAPK KPAAK AKVAKTLSRTSPGKK A AAKAKKV AKKPK+VKSPARKVQARKVKK
Subjt:  --KVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

XP_022999095.1 histone H1-like [Cucurbita maxima]4.9e-6471.97Show/hide
Query:  MASAANPVVPSAAPVAVAAVAP------------AKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL
        M+SAA+PV  S AP  VA VAP            A KA KAKKP+ AK++++S THP FF+MISEAIVSLKERTGSSQYAITKFSEEKHKQLP+NFRKLL
Subjt:  MASAANPVVPSAAPVAVAAVAP------------AKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL

Query:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPKA----------KAVVIPKPKA
        LVHLKKLVAADK+VKVKNSYKLPSARS  A A  PV AKKP+S+K KA      AAVAKPKAKTAV KPK K  VAKPKA          KAV   K KA
Subjt:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPKA----------KAVVIPKPKA

Query:  AAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
        A KVKKVAPK KPAAK AKVAKTLSR SPGKK A AAKAKKV AKKPK+VKSPARKVQARKVKK
Subjt:  AAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

XP_023521173.1 histone H1-like [Cucurbita pepo subsp. pepo]1.1e-6371.97Show/hide
Query:  MASAANPVVPSAAPVAVAAV------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL
        M+SAA+PV  S AP  VA V            A A KA KAKKP+ AK++++S THP FF+MISEAIVSLKERTGSSQYAITKFSEEKHKQLP+NFRKLL
Subjt:  MASAANPVVPSAAPVAVAAV------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL

Query:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPKA----------KAVVIPKPKA
        LVHLKKLVAADK+VKVKNSYKLPSARS  A A  PV AKKP+S+K KA      AAVAKPKAKTAV KPK K  VAKPKA          KAV   K KA
Subjt:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPKA----------KAVVIPKPKA

Query:  AAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
        A KVKKVAPK KPAAK AKVAKTLSRTSPGKK A AAKAKKV AKKPK+VKSPARKVQARKVKK
Subjt:  AAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

TrEMBL top hitse value%identityAlignment
A0A1S3C278 histone H1-like3.8e-6269.52Show/hide
Query:  MASAANPVVPSAAPVAVAAV-------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKL
        M+SAA+PVV S AP A  A              A A KA KAKKP+ AKK+++S THP F QMISEAIVSLKERTGSSQYAITKF+EEKHKQLP+NFRKL
Subjt:  MASAANPVVPSAAPVAVAAV-------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKL

Query:  LLVHLKKLVAADKIVKVKNSYKLPSARSIQAK--AVVPVAAKKPSSAKPKAA------AVAKPKAKT-------AVAKPKVKS-----AVAKPKAKAVVI
        LLVHLKKLVAADK+VKVKNSYKLPSARSIQAK  A  PVA KKP S+K KA       AVAKPKAKT       AVAKPK K+      VAKPK  A   
Subjt:  LLVHLKKLVAADKIVKVKNSYKLPSARSIQAK--AVVPVAAKKPSSAKPKAA------AVAKPKAKT-------AVAKPKVKS-----AVAKPKAKAVVI

Query:  PKPKAAAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
         K KAA KVKKVAPK K  AKA KVAKTLSRTSPGK+ A AAKAKKV AKKPK+VKSPARKVQARKVKK
Subjt:  PKPKAAAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

A0A5D3D4H1 Histone H1-like5.8e-6370.79Show/hide
Query:  MASAANPVVPSAAPVAVAAV-------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKL
        M+SAA+PVV S AP A  A              A A KA KAKKP+ AKK+++S THP F QMISEAIVSLKERTGSSQYAITKF+EEKHKQLP+NFRKL
Subjt:  MASAANPVVPSAAPVAVAAV-------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKL

Query:  LLVHLKKLVAADKIVKVKNSYKLPSARSIQAK--AVVPVAAKKPSSAKPKAA------AVAKPKAKTAVAKPKVKSAVAKPKAKAV----VIPKPKAAA-
        LLVHLKKLVAADK+VKVKNSYKLPSARSIQAK  A  PVA KKP S+K KA       AVAKPKAKTA AKPK K AVAKPK K V     + KPK AA 
Subjt:  LLVHLKKLVAADKIVKVKNSYKLPSARSIQAK--AVVPVAAKKPSSAKPKAA------AVAKPKAKTAVAKPKVKSAVAKPKAKAV----VIPKPKAAA-

Query:  -----KVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
             KVKKVAPK K  AKA KVAKTLSRTSPGK+ A AAKAKKV AKKPK+VKSPARKVQARKVKK
Subjt:  -----KVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

A0A6J1CNP7 histone H1-like1.3e-6570.79Show/hide
Query:  MASAANPVVPSAAPVAVAA------------VAPAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL
        MASAA+P+VPS AP A AA             A + KA KAKKP+ AK+ K+S THP FFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLP+NFRKLL
Subjt:  MASAANPVVPSAAPVAVAA------------VAPAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL

Query:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPKAKAVVIP-------------------K
        LVHLKKLVAADK+VKVKNSYKLPSARSIQAKA  PVAAKKP+S+K KAAA  K KA  AV KPK K+AV KPK KAVV P                   K
Subjt:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPKAKAVVIP-------------------K

Query:  PKAAAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
        PKAAAKV K A KAKPAA+ AKVAKTL++TSPGK+ A AAKAKKV AKKPK+VKSPARKVQARKVKK
Subjt:  PKAAAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

A0A6J1G2W2 histone H1-like1.8e-6472.35Show/hide
Query:  MASAANPVVPSAAPVAVAAV------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL
        M+SAA+PV  S AP  VAAV            A A KA KAKKP+ AK++++S THP FF+MISEAIVSLKERTGSSQYAITKFSEEKHK+LP+NFRKLL
Subjt:  MASAANPVVPSAAPVAVAAV------------APAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL

Query:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPK--AKAVVIPKPKAAA------
        LVHLKKLVAADK+VKVKNSYKLPSARS  A A  PV AKKP+S+K KA      AAVAKPKAKTAV KPK K AVAKPK  AK+ V+ KPKA A      
Subjt:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPK--AKAVVIPKPKAAA------

Query:  --KVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
          KVKKVAPK KPAAK AKVAKTLSRTSPGKK A AAKAKKV AKKPK+VKSPARKVQARKVKK
Subjt:  --KVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

A0A6J1KEC3 histone H1-like2.4e-6471.97Show/hide
Query:  MASAANPVVPSAAPVAVAAVAP------------AKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL
        M+SAA+PV  S AP  VA VAP            A KA KAKKP+ AK++++S THP FF+MISEAIVSLKERTGSSQYAITKFSEEKHKQLP+NFRKLL
Subjt:  MASAANPVVPSAAPVAVAAVAP------------AKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLL

Query:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPKA----------KAVVIPKPKA
        LVHLKKLVAADK+VKVKNSYKLPSARS  A A  PV AKKP+S+K KA      AAVAKPKAKTAV KPK K  VAKPKA          KAV   K KA
Subjt:  LVHLKKLVAADKIVKVKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKA------AAVAKPKAKTAVAKPKVKSAVAKPKA----------KAVVIPKPKA

Query:  AAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
        A KVKKVAPK KPAAK AKVAKTLSR SPGKK A AAKAKKV AKKPK+VKSPARKVQARKVKK
Subjt:  AAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

SwissProt top hitse value%identityAlignment
P08283 Histone H11.3e-3052.72Show/hide
Query:  AAVAPAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYKLPSARSIQ
        A V   KKA K  KP  A K +  ++HP++ +MI +AIVSLKE+ GSSQYAI KF EEK KQLPANF+KLLL +LKK VA+ K++KVK S+KL +     
Subjt:  AAVAPAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYKLPSARSIQ

Query:  AKAVVPVAAKKPSSAKPKAAAVAKPKAKTA--VAKPKVKSAVAKP----KAKAVVIPKPKAAAKVKKVAPKAKPAA-------------KAAKVAKTLSR
               AAKKP+ AKPKA   AK K+  A   AKPK K AV KP    KAKAV     KAAAK K VA K KP A             K AKVAKT  +
Subjt:  AKAVVPVAAKKPSSAKPKAAAVAKPKAKTA--VAKPKVKSAVAKP----KAKAVVIPKPKAAAKVKKVAPKAKPAA-------------KAAKVAKTLSR

Query:  TSPGKKVAAAAK--AKKVVAK--KPKSVKSPARKVQARK
        T+PGKKVAA  K  AKKV  K  K KSVKSP +KV  ++
Subjt:  TSPGKKVAAAAK--AKKVVAK--KPKSVKSPARKVQARK

P23444 Histone H17.7e-2852.05Show/hide
Query:  ANPVVPSAAPVAVAAVAPAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHK-QLPANFRKLLLVHLKKLVAADKIVK
        A P  P+ AP A AA A A KA KA  P    K +AS TH  + +M+SEAI SLKERTGSS YAI KF E+KHK +LP NFRKLL V LKKLVA  K+ K
Subjt:  ANPVVPSAAPVAVAAVAPAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHK-QLPANFRKLLLVHLKKLVAADKIVK

Query:  VKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKAAAVAKPKAKT-AVAKPKVK-------SAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAK---AAKV
        VKNSYKL SA     K     A KKP +   K  A AKPKAKT A AKP  K        AV KPK  A    KP A AK K    K KP AK    AK 
Subjt:  VKNSYKLPSARSIQAKAVVPVAAKKPSSAKPKAAAVAKPKAKT-AVAKPKVK-------SAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAK---AAKV

Query:  AKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK
        AKT ++ +PGKK    A AKK  A   K   +P RK  +RK KK
Subjt:  AKTLSRTSPGKKVAAAAKAKKVVAKKPKSVKSPARKVQARKVKK

P26569 Histone H1.22.1e-3350.2Show/hide
Query:  PAKKAPKAKKPTCAK------------KSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYK
        PA K  K+KK T AK            K K +S+HP++ +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+LVA++K+VKVK S+K
Subjt:  PAKKAPKAKKPTCAK------------KSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYK

Query:  LPSARSIQA-KAVVPVAAKKPSSAKPK---AAAVAKPKAKTA-----------------VAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAK
        +PSARS    K   PV  K    AKPK   AAAVA  KAK A                  AKPK K   AKPK+K+V      A +K K VA K K   +
Subjt:  LPSARSIQA-KAVVPVAAKKPSSAKPK---AAAVAKPKAKTA-----------------VAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAK

Query:  AAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPK---SVKSPARKVQARKVKK
         AK ++T +RTSPGKKVAA AK   V  K P     VKSPA++   RK KK
Subjt:  AAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPK---SVKSPARKVQARKVKK

P37218 Histone H11.8e-3250.59Show/hide
Query:  AKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYKLPSARSIQAKAV-
        AKK  KAKKP   +K  A+ THP +F+MI +AIV+LKERTGSSQ+AITKF EEK K LP+NF+KLLL  LKK VA++K+VKVKNSYKLPS     A AV 
Subjt:  AKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYKLPSARSIQAKAV-

Query:  ---VPVAAKKPSSAKPKA--------------------AAVAKPKAK---TAVAKPKVKS-AVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAK------
            P AAK   +AKPKA                    AA AKP AK    A AKP  K+  VAK K KA    KPKAA K K    K K A K      
Subjt:  ---VPVAAKKPSSAKPKA--------------------AAVAKPKAK---TAVAKPKVKS-AVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAK------

Query:  --AAKVAKTLSRTSPGKKVA-AAAKAKKVVAKK--PKSVKSPARKVQARKVKK
           AKVAKT +RT+P +K A  A  AKK   KK   K+VKSPA+K   ++ +K
Subjt:  --AAKVAKTLSRTSPGKKVA-AAAKAKKVVAKK--PKSVKSPARKVQARKVKK

Q9M5W4 Histone H11.0e-3559.81Show/hide
Query:  APAKKAPKAKKPTCA---KKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYKLPSARSIQ
        A A K PK KK   A    KSK +S+HPSFF+MIS+AI +LKERTGSSQYAI KF E+KHKQLP+NFRKLLL HLKKLVA+ K+VKVKNS+KLPSAR+  
Subjt:  APAKKAPKAKKPTCA---KKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYKLPSARSIQ

Query:  AKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAV-AKPKAKAVVIPKPKAAAKVK-KVAPKAKP-AAKAAKVAKTLSRTSPGKKVAAAAKAKKV
          A  P  AKKP+  KPK A  AKPK     AKPK K+ V AK KA    + K   AAK K K A K K  AAK AKVAKT +  SPGKK       K V
Subjt:  AKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAV-AKPKAKAVVIPKPKAAAKVK-KVAPKAKP-AAKAAKVAKTLSRTSPGKKVAAAAKAKKV

Query:  VAKKPKSVKSPARK
          KK K+VKSPA K
Subjt:  VAKKPKSVKSPARK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein1.3e-2749.04Show/hide
Query:  APVAVAAV--APAKKAPKAKK---------PTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKI
        APV  AAV   PA K  K K             A K +  S+HP++ +MI +AIV+LKERTGSSQYAI KF EEK K+LP  FRKLLL++LK+LVA+ K+
Subjt:  APVAVAAV--APAKKAPKAKK---------PTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKI

Query:  VKVKNSYKLPSARSIQAKAVVPVAAKK---PSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPK--------AKAVVIPKPKA-AAKVKKVAPKAKPAAKA
        VKVK S+KLPSA    AKA  P AA +   P+  KP   AV K K K A A    K+   KPK        AKA   P P+A AA  K+ A  AKP AKA
Subjt:  VKVKNSYKLPSARSIQAKAVVPVAAKK---PSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPK--------AKAVVIPKPKA-AAKVKKVAPKAKPAAKA

Query:  --AKVAKTLSRTSPGKKVAAAAK------------AKKVVAKKPKSVKSPARKVQARKVKK
          AK AKT   TSP KK  AA K             KKVV  KPK+VKSPA++  +R VKK
Subjt:  --AKVAKTLSRTSPGKKVAAAAK------------AKKVVAKKPKSVKSPARKVQARKVKK

AT2G18050.1 histone H1-39.7e-1039.05Show/hide
Query:  KKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQ-LPANFRKLLLVHLKKLVAADKIVKVKNSYKLPS-----ARSIQ
        KK P AKKP    +   ++THP +FQMI EA++ LKE+ GSS YAI K  EEKHK  LP +FRK L + LK  VA  K+VK++ SYKL        R   
Subjt:  KKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQ-LPANFRKLLLVHLKKLVAADKIVKVKNSYKLPS-----ARSIQ

Query:  AKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPA
         K    +  +     K   ++  +PK   +V K + K  V K +      PK   ++  KK A KA  A
Subjt:  AKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPA

AT2G18050.2 histone H1-32.1e-0437.76Show/hide
Query:  MISEAIVSLKERTGSSQYAITKFSEEKHKQ-LPANFRKLLLVHLKKLVAADKIVKVKNSYKLPS-----ARSIQAKAVVPVAAKKPSSAKPKAAAVAKPK
        MI EA++ LKE+ GSS YAI K  EEKHK  LP +FRK L + LK  VA  K+VK++ SYKL        R    K    +  +     K   ++  +PK
Subjt:  MISEAIVSLKERTGSSQYAITKFSEEKHKQ-LPANFRKLLLVHLKKLVAADKIVKVKNSYKLPS-----ARSIQAKAVVPVAAKKPSSAKPKAAAVAKPK

Query:  AKTAVAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPA
           +V K + K  V K +      PK   ++  KK A KA  A
Subjt:  AKTAVAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein1.5e-3450.2Show/hide
Query:  PAKKAPKAKKPTCAK------------KSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYK
        PA K  K+KK T AK            K K +S+HP++ +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+LVA++K+VKVK S+K
Subjt:  PAKKAPKAKKPTCAK------------KSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYK

Query:  LPSARSIQA-KAVVPVAAKKPSSAKPK---AAAVAKPKAKTA-----------------VAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAK
        +PSARS    K   PV  K    AKPK   AAAVA  KAK A                  AKPK K   AKPK+K+V      A +K K VA K K   +
Subjt:  LPSARSIQA-KAVVPVAAKKPSSAKPK---AAAVAKPKAKTA-----------------VAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAK

Query:  AAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPK---SVKSPARKVQARKVKK
         AK ++T +RTSPGKKVAA AK   V  K P     VKSPA++   RK KK
Subjt:  AAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPK---SVKSPARKVQARKVKK

AT2G30620.2 winged-helix DNA-binding transcription factor family protein1.1e-2644.78Show/hide
Query:  PAKKAPKAKKPTCAK------------KSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYK
        PA K  K+KK T AK            K K +S+HP++ +MI +AIV+LKERTGSSQYAI KF EEKHK LP  FRKLLLV+LK+LVA++K+VKVK S+K
Subjt:  PAKKAPKAKKPTCAK------------KSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYK

Query:  LPSARSIQAKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAA
        +PSAR               S+A PK AA  K KA T VAKP                                       K ++T +RTSPGKKVAA A
Subjt:  LPSARSIQAKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAA

Query:  KAKKVVAKKPK---SVKSPARKVQARKVKK
        K   V  K P     VKSPA++   RK KK
Subjt:  KAKKVVAKKPK---SVKSPARKVQARKVKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCCGCCAATCCAGTTGTCCCCTCCGCCGCGCCGGTGGCTGTAGCAGCCGTAGCTCCGGCGAAGAAAGCACCGAAGGCTAAGAAGCCAACTTGTGCGAAGAA
ATCCAAAGCCTCGTCGACGCATCCTTCCTTCTTTCAGATGATAAGCGAAGCGATCGTTTCGTTGAAGGAGAGGACCGGATCGAGTCAATACGCCATTACGAAGTTCAGCG
AGGAGAAGCACAAGCAGTTGCCGGCGAATTTCAGGAAGCTCTTGCTTGTTCATCTCAAGAAACTCGTTGCTGCTGATAAAATCGTGAAGGTCAAGAACTCCTACAAGCTT
CCATCGGCGCGCTCGATTCAGGCGAAGGCAGTAGTGCCAGTCGCCGCTAAGAAACCGTCGAGCGCCAAGCCGAAGGCCGCCGCCGTCGCTAAACCGAAGGCGAAAACTGC
TGTGGCTAAACCGAAGGTGAAAAGTGCTGTGGCTAAGCCGAAGGCGAAGGCGGTGGTGATACCGAAGCCGAAGGCGGCGGCGAAGGTGAAGAAGGTTGCTCCGAAGGCGA
AACCTGCCGCGAAGGCTGCGAAGGTTGCGAAAACATTGTCCCGGACGTCGCCGGGGAAGAAAGTTGCGGCGGCGGCGAAGGCGAAGAAGGTCGTGGCGAAGAAGCCGAAG
AGTGTGAAGTCGCCGGCGAGAAAAGTCCAGGCAAGGAAAGTCAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATTTAAACCAATGTCCATTCGATAACAAATATCTTTCGATATTAGATACCAAACAACTTCAAATTACATTCATTCGAAAGCTTAGATTCTAAGCTACAAATCCATTTTAA
GATAACTAAAATTCATCAAGTATTAAGCAAGTTGTAATCTTAGAAAGTCAAGTGAAAAACACATCCAAAACTTTTTCATTCTCAATATCAACTTGCCTATCCATATCCAT
TCTTAACTCCTACTTTCAATACCCACCGTCAATAAATTCAAGATCTAACGGCCCATATTCAAACTTTCACGAAGATATCGATCCGCGTCAAATGGCTCTCAACCAATCAC
ATAGCAGCAGTATGTTTCGACTTTGTTATATAAATTGCATTCAACCGTCACTCTCCTCATCGATATTCTCTGAAAATTATTCCCTATATTTCTTCTCCATCACTAATCGA
TTCGAATATGGCTTCCGCCGCCAATCCAGTTGTCCCCTCCGCCGCGCCGGTGGCTGTAGCAGCCGTAGCTCCGGCGAAGAAAGCACCGAAGGCTAAGAAGCCAACTTGTG
CGAAGAAATCCAAAGCCTCGTCGACGCATCCTTCCTTCTTTCAGATGATAAGCGAAGCGATCGTTTCGTTGAAGGAGAGGACCGGATCGAGTCAATACGCCATTACGAAG
TTCAGCGAGGAGAAGCACAAGCAGTTGCCGGCGAATTTCAGGAAGCTCTTGCTTGTTCATCTCAAGAAACTCGTTGCTGCTGATAAAATCGTGAAGGTCAAGAACTCCTA
CAAGCTTCCATCGGCGCGCTCGATTCAGGCGAAGGCAGTAGTGCCAGTCGCCGCTAAGAAACCGTCGAGCGCCAAGCCGAAGGCCGCCGCCGTCGCTAAACCGAAGGCGA
AAACTGCTGTGGCTAAACCGAAGGTGAAAAGTGCTGTGGCTAAGCCGAAGGCGAAGGCGGTGGTGATACCGAAGCCGAAGGCGGCGGCGAAGGTGAAGAAGGTTGCTCCG
AAGGCGAAACCTGCCGCGAAGGCTGCGAAGGTTGCGAAAACATTGTCCCGGACGTCGCCGGGGAAGAAAGTTGCGGCGGCGGCGAAGGCGAAGAAGGTCGTGGCGAAGAA
GCCGAAGAGTGTGAAGTCGCCGGCGAGAAAAGTCCAGGCAAGGAAAGTCAAGAAATGAATGGGTTAGGGTTTGGATTGAATTCTAGGGTTTGGTTGTTGTTAATTACGAC
TGGTTTGGTAGGGATGTGTAAATTAGGCAGGCATGAGATCTGAGTTGTTGTTGTTATACACCATTTTATTGAAAATCAGTTAGATAAATTCTCAAGTGGTTGTGAAATTC
ATCTTTTTCTTCGATCTGTATCATCTTTTCTGTTTATCTTTTACGGTTCGGATTGTGAAGAAAAGCTTCGTAAGTTGTTTTAATGGCGTTTTGAAATCTAAATTGTCCAC
GCGTATTGCACGCGATTACTCTACAGCGTTGCCAGACTTAACTATAGTTAAAATATATTTGGGGAG
Protein sequenceShow/hide protein sequence
MASAANPVVPSAAPVAVAAVAPAKKAPKAKKPTCAKKSKASSTHPSFFQMISEAIVSLKERTGSSQYAITKFSEEKHKQLPANFRKLLLVHLKKLVAADKIVKVKNSYKL
PSARSIQAKAVVPVAAKKPSSAKPKAAAVAKPKAKTAVAKPKVKSAVAKPKAKAVVIPKPKAAAKVKKVAPKAKPAAKAAKVAKTLSRTSPGKKVAAAAKAKKVVAKKPK
SVKSPARKVQARKVKK