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Sed0021911 (gene) of Chayote v1 genome

Gene IDSed0021911
OrganismSechium edule (Chayote v1)
DescriptionHeat shock a protein 1/8
Genome locationLG03:523792..525205
RNA-Seq ExpressionSed0021911
SyntenySed0021911
Gene Ontology termsGO:0034551 - mitochondrial respiratory chain complex III assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR027858 - Protein BRAWNIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037665.1 putative transmembrane protein [Cucumis melo var. makuwa]7.1e-2086.44Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKNDP
        M +KFGGGLRPTGTPSV WSFVVVVSSLLAGASIVH+IYKPNLTLPP +S QTTNK DP
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKNDP

KAB2624078.1 hypothetical protein D8674_015738 [Pyrus ussuriensis x Pyrus communis]6.9e-1572.88Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKNDP
        M RKFGGG  PTGTPS+AWS VVVV+SLLAGAS+VHN+YKP+LTLPPV++V  TN   P
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKNDP

KAG7016236.1 hypothetical protein SDJN02_21342, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2091.38Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKND
        MARKFGGGLRPTGTPSV WSFVVVVSSLLAGASIVHNIYKPNLTLPPV+SVQ T+K D
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKND

KGN51309.1 hypothetical protein Csa_009362 [Cucumis sativus]6.7e-1881.67Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQ-TTNKNDP
        M +KFGGGLRPTGTPSV WSFVVV+SSLLAGASIVHNI+KPNLTLPP +S Q TTNK +P
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQ-TTNKNDP

PKI46563.1 hypothetical protein CRG98_032905 [Punica granatum]5.3e-1577.59Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKND
        M RKFGGG  PTGTPS+AWS VVVV SLLAGASIVHNIYKPNLTLPP+ESV    K +
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKND

TrEMBL top hitse value%identityAlignment
A0A0A0KQX5 Uncharacterized protein3.2e-1881.67Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQ-TTNKNDP
        M +KFGGGLRPTGTPSV WSFVVV+SSLLAGASIVHNI+KPNLTLPP +S Q TTNK +P
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQ-TTNKNDP

A0A2I0IS49 Uncharacterized protein2.6e-1577.59Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKND
        M RKFGGG  PTGTPS+AWS VVVV SLLAGASIVHNIYKPNLTLPP+ESV    K +
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKND

A0A445FZ73 Uncharacterized protein3.4e-1576.79Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNK
        M RKFGGG +PTGTPS+AWS VVVV SLLAGAS+VHNIYKPNLTLPPV+ V +T +
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNK

A0A445FZM7 Uncharacterized protein3.4e-1576.79Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNK
        M RKFGGG +PTGTPS+AWS VVVV SLLAGAS+VHNIYKPNLTLPPV+ V +T +
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNK

A0A5A7T878 Putative transmembrane protein3.5e-2086.44Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKNDP
        M +KFGGGLRPTGTPSV WSFVVVVSSLLAGASIVH+IYKPNLTLPP +S QTTNK DP
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKNDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26055.1 unknown protein1.3e-1465.52Show/hide
Query:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKND
        M  KF GG +PTGTPS+AWS VVVV+SLLAGAS+VHNIYKP+LTLP +E+ +   K +
Subjt:  MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKND

AT5G57080.1 unknown protein5.3e-1366.67Show/hide
Query:  GLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKND
        G  PTGTPS+A S +VVV+SLLAGAS+VHNIYKP+L+LPP+ES +   K+D
Subjt:  GLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGGAAATTCGGTGGTGGGTTGCGCCCCACTGGTACTCCCTCGGTGGCTTGGTCCTTTGTCGTCGTCGTCTCTTCGCTTCTCGCCGGCGCCTCCATCGTCCACAA
TATCTACAAACCAAATCTTACCTTGCCTCCAGTGGAGAGTGTCCAAACCACCAACAAGAATGATCCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
AATAAATTGAAGTGTTATTTTAGGTGTTAAAAATACAAAAGGCAAATGGAATATTGTATCCAATAACGGTTTGATGAGCTGAAGCGAGGGCCGGATCCCTGAACCAAAGA
TTTAAAGAACGGTTCGCAGGCAGATCGAAGAATGGAACCTTGTTTGGGTATAGTTTAAAGAACGGTTCAATTGTCAAAATTGAAATCTGGGCGGTGGTGGGTGTTGGCGA
AGCTGAATCATGGCTCGGAAATTCGGTGGTGGGTTGCGCCCCACTGGTACTCCCTCGGTGGCTTGGTCCTTTGTCGTCGTCGTCTCTTCGCTTCTCGCCGGCGCCTCCAT
CGTCCACAATATCTACAAACCAAATCTTACCTTGCCTCCAGTGGAGAGTGTCCAAACCACCAACAAGAATGATCCTAGTTAAAATTTATTACTTTATAACCTTGAGCTAC
AGTTAGTTTATTTCTTTCCAGATGCATGCTTTTCTTGTCGTTGAGCTCTTTGTTTTTCCCATGCTTTGATTTGAAAGTTCTTTTACTGTGAGAAAGGAACAAAAGAATCT
TTGAAGATAATCTCGAGAACTTTGTATTATAGATTTCTCTAGTTATGACTAGTTCATTCTCACTTGTGTTATTGTGATTATCTTTATATTTATTCCAATTGGAATAGCTT
TTTGTAATCTCCTCTTGCAATCGAAGGGTTGGCTTGGCATGCTCCTTCTATACGTTTTTTGATTCAACAACATTTAGAAGTAGGGTTCAACCTGTAAGCCGTATGTGATG
TCACTAGAGCTATTTAACTGCCGC
Protein sequenceShow/hide protein sequence
MARKFGGGLRPTGTPSVAWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKNDPS