CuGenDBv2

Gene ID	Sed0021917
Organism	Sechium edule (Chayote v1)
Description	nuclear pore complex protein NUP1-like
Genome location	LG12:33617781..33627471
RNA-Seq Expression	Sed0021917
Synteny	Sed0021917
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6587893.1 Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. sororia]

6.2e-248

70.82

Show/hide

Query:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS
        SS PY  GGVGGKVRKPT+R PPPTPYARPEQNQ +RRW+SKLV PAYRLI+GGATRLLPYLFS+SL       PGDEDQ    V   L   +   E   
Subjt:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS

Query:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANR
                 LPGPS +A RS    D +G QK RE DAL+GNGNF +EKWIQGKTFSRDEVSRLLEIIQSRALEPS KVE+NK SPQSI KQ EQ  AANR
Subjt:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANR

Query:  VLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMS
        V+K PR EK+EDLE+AT+GNLTPHPHSS  +   AS +                    ARAYMSN+KSEPGLL +KIPDD R+LL  DHQMSKPFIP MS
Subjt:  VLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMS

Query:  PNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIR
        PNPSTCWPG   AMSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSK+ QLQGD+ KFVNTPSPLWQQSRTPAY QMTS NDP DEA GSIGP R
Subjt:  PNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIR

Query:  RIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEEL
        R+   ASAVT+SRRSAY YP+R+AETK+E+SNISEGILP  KKNLELGGAST  LS S+GNN+SESSL   RP+SS+VART+LEHISRNPPTPKEKNEEL
Subjt:  RIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEEL

Query:  KRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLL
        KR IEWK+T SS+VQT+KPN+T SLA      Q  +QVDQN HP LS KGKTVST+H + SAGRNSD VNQNS D++ R++N D K+KDDA GLK NS  
Subjt:  KRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLL

Query:  SKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG
         KD+PP KIVPALGSEVGTQ KP  SLGTKPGFPSITIKKPES W +S +SGSAFTF VS A SG +SEPPTPSIFPSTS+G
Subjt:  SKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG

KAG7021778.1 Nuclear pore complex protein NUP1 [Cucurbita argyrosperma subsp. argyrosperma]

4.7e-248

70.82

Show/hide

Query:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS
        SS PY  GGVGGKVRKPT+R PPPTPYARPEQNQ +RRW+SKLV PAYRLI+GGATRLLPYLFS+SL       PGDEDQ    V   L   +   E   
Subjt:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS

Query:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANR
                 LPGPS +A RS    D +G QK RE DAL+GNGNF +EKWIQGKTFSRDEVSRLLEIIQSRALEPS KVE+NK SPQSI KQ EQ  AANR
Subjt:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANR

Query:  VLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMS
        V+K PR EK+EDLE+AT+GNLTPHPHSS  +   AS +                    ARAYMSN+KSEPGLL +KIPDD R+LL  DHQMSKPFIP MS
Subjt:  VLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMS

Query:  PNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIR
        PNPSTCWPG   AMSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSK+ QLQGD+ KFVNTPSPLWQQSRTPAY QMTS NDP DEA GSIGP R
Subjt:  PNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIR

Query:  RIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEEL
        R+   ASAVT+SRRSAY YP+R+AETK+E+SNISEGILP  KKNLELGGAST  LS S+GNN+SESSL   RP+SS+VART+LEHISRNPPTPKEKNEEL
Subjt:  RIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEEL

Query:  KRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLL
        KR IEWK+T SS+VQT+KPN+T SLA      Q  +QVDQN HP LS KGKTVST+H + SAGRNSD VNQNS D++ R++N D K+KDDA GLK NS  
Subjt:  KRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLL

Query:  SKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG
         KD+PP KIVPALGSEVGTQ KP  SLGTKPGFPSITIKKPES W +S +SGSAFTF VS A SG +SEPPTPSIFPSTS+G
Subjt:  SKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG

XP_022929707.1 nuclear pore complex protein NUP1-like [Cucurbita moschata]

3.6e-248

70.97

Show/hide

Query:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS
        SSTPY  GGVGGKVRKPT+R PPPTPYARPEQNQ +RRW+SKLV PAYRLI+GGATRLLPYLFSKSL       PGDEDQ    V   L   +   E   
Subjt:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS

Query:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANR
                 LPGPS +A RS    D +G QK RE DAL+GNGNF +EKWIQGKTFSRDEVSRLL IIQSRALEPS KVE+NK SPQSI KQ EQ  AANR
Subjt:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANR

Query:  VLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMS
        V+K PR EK+EDLE+AT+GNLTPHPHSS  +   AS +                    ARAYMSN+KSEPGLL +KIPDD R+LL  DHQMSKPFIP MS
Subjt:  VLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMS

Query:  PNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIR
        PNPSTCWPG   AMSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSK+ QLQGD+ KFVNTPSPLWQQSRTPAY QMTS NDP DEA GSIGP R
Subjt:  PNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIR

Query:  RIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEEL
        R+   ASAVT+SRRSAY YP+R+AETK+E+SNISEGILP  KKNLELGGAST  LS S+GNN+SESSL   RP+SS+VART+LEHISRNPPTPKEKNEEL
Subjt:  RIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEEL

Query:  KRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLL
        KR IEWK+T SS+VQT+KPN+T SLA      Q  +QVDQN HP LS KGKTVST+H + SAGRNSD VNQNS D++ R++N D K+KDDA GLK NS  
Subjt:  KRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLL

Query:  SKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG
         KD+PP KIVPALGSEVGTQ KP  SLGTKP FPSITIKKPES W +S +SGSAFTF VS ASSG +SEPPTPSIFPSTS+G
Subjt:  SKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG

XP_023529547.1 nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo]

2.1e-248

70.97

Show/hide

Query:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS
        SSTPY  GGVGGKVRKPT+R PPPTPYARPEQNQ +RRW+SKLV PAYRLI+GGATRLLPYLFSKSL       PGDEDQ            +   E   
Subjt:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS

Query:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANR
                 LPGPS +A RS    D +G QK RE DAL+GNGNF +EKWIQGKTFSRDEVSRLLEIIQSRALEPS KVE+NK SPQSI KQ EQ  AANR
Subjt:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANR

Query:  VLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMS
        V+K PR EK+EDLE+AT+GNLTPHPHSS  +   AS +                    ARAYMSN+KSEPGLL +KIPDD R+LL  DHQMSKPFIP MS
Subjt:  VLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMS

Query:  PNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIR
        PNPSTCWPG   AMSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSK+ QLQGD+ KFVNTPSPLWQQSRTPAY QMTS NDP DEA GSIGP R
Subjt:  PNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIR

Query:  RIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEEL
        R+   ASAVT+SRRSAY YP+R+AETK+E+SNISEGILP  KKNLELGGAST  LS S+GNN SESSL    P+SS+VART+LEHISRNPPTPKEKNEEL
Subjt:  RIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEEL

Query:  KRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLL
        KR IEWK+T SS+VQT+KPN+T SLA      QK +QVDQN HP LS KGKTVST+H + SAGRNSD VNQNS D++ R++N DLK+KDDA GLK N   
Subjt:  KRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLL

Query:  SKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG
         KDVPP KIVPALGSEVGTQ KP  SLGTKPGFPSIT+KKPES W +S +SGSAFTF VS ASSG +SEPPTPSIFPSTS+G
Subjt:  SKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG

XP_023529548.1 nuclear pore complex protein NUP1-like isoform X2 [Cucurbita pepo subsp. pepo]

3.6e-248

71.01

Show/hide

Query:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQG-LRAVFGCLGLLSVFVESC
        SSTPY  GGVGGKVRKPT+R PPPTPYARPEQNQ +RRW+SKLV PAYRLI+GGATRLLPYLFSKSL       PGDEDQ  + A        +   E  
Subjt:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQG-LRAVFGCLGLLSVFVESC

Query:  SGLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAAN
                  LPGPS +A RS    D +G QK RE DAL+GNGNF +EKWIQGKTFSRDEVSRLLEIIQSRALEPS KVE+NK SPQSI KQ EQ  AAN
Subjt:  SGLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAAN

Query:  RVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSM
        RV+K PR EK+EDLE+AT+GNLTPHPHSS  +   AS +                    ARAYMSN+KSEPGLL +KIPDD R+LL  DHQMSKPFIP M
Subjt:  RVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSM

Query:  SPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPI
        SPNPSTCWPG   AMSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSK+ QLQGD+ KFVNTPSPLWQQSRTPAY QMTS NDP DEA GSIGP 
Subjt:  SPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPI

Query:  RRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEE
        RR+   ASAVT+SRRSAY YP+R+AETK+E+SNISEGILP  KKNLELGGAST  LS S+GNN SESSL    P+SS+VART+LEHISRNPPTPKEKNEE
Subjt:  RRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEE

Query:  LKRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSL
        LKR IEWK+T SS+VQT+KPN+T SLA      QK +QVDQN HP LS KGKTVST+H + SAGRNSD VNQNS D++ R++N DLK+KDDA GLK N  
Subjt:  LKRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSL

Query:  LSKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG
          KDVPP KIVPALGSEVGTQ KP  SLGTKPGFPSIT+KKPES W +S +SGSAFTF VS ASSG +SEPPTPSIFPSTS+G
Subjt:  LSKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CT79 nuclear pore complex protein NUP1 isoform X2

1.6e-238

68.86

Show/hide

Query:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS
        SSTPY  GGVGGK+RKPT+R PPPTPYARPEQNQS RRW+SKLV PAYRLI+GGATRLLPYLFSKSL       PGDED     V   +       +   
Subjt:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS

Query:  GLTKPVTS--SLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAA
         + K  +S   LPGP  K NRSE   DF+GHQK REND L+GN NF VEKWIQGKTFSRDEVS LLEIIQS+AL PSNKVE+ KFSPQSI KQ EQ SAA
Subjt:  GLTKPVTS--SLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAA

Query:  NRVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPS
        NRVLK P  EKQEDLE+A +GNLTPHP SS  +   AS +                    ARAYMS +KS+  LLP+K P D R+LL  DHQMSKP IPS
Subjt:  NRVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPS

Query:  MSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGP
        MSPNPSTCWPG   AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSK+ +LQGD+ KFVNTP+PLWQQ RT AY QMTS ND LDEA GSIGP
Subjt:  MSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGP

Query:  IRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNE
        IRR+RH ASA T+SRRSAYFY S + ETK+E+ NI +GILP  KKNLELGGAST  LS+S+GNNNSESSLL VRP SS+VART+LEHISRNPPTPKEK E
Subjt:  IRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNE

Query:  ELKRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPEL-SVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNN
        ELKR I WKK+ S +V T+ PN T+SLA      QK  Q DQN HP+L S KGKTVSTV P++S GR+SD VNQ+S ++K R+ + DL HK DA GLK N
Subjt:  ELKRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPEL-SVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNN

Query:  SLLSKDVPPKIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG
        S   KDV  KIVPA+GSE GT+ KPSPSLG KPGFPSITI KPESKWA SS+SGS FTF VS ASSG LSEPPTPSIFPSTS+G
Subjt:  SLLSKDVPPKIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG

A0A6J1CV22 nuclear pore complex protein NUP1 isoform X3

1.6e-238

68.91

Show/hide

Query:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS
        SSTPY  GGVGGK+RKPT+R PPPTPYARPEQNQS RRW+SKLV PAYRLI+GGATRLLPYLFSKSL       PGDED            +   V    
Subjt:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS

Query:  GLTKPVTSS---LPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSA
         L    TSS   LPGP  K NRSE   DF+GHQK REND L+GN NF VEKWIQGKTFSRDEVS LLEIIQS+AL PSNKVE+ KFSPQSI KQ EQ SA
Subjt:  GLTKPVTSS---LPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSA

Query:  ANRVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIP
        ANRVLK P  EKQEDLE+A +GNLTPHP SS              ++E+     +      ARAYMS +KS+  LLP+K P D R+LL  DHQMSKP IP
Subjt:  ANRVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIP

Query:  SMSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIG
        SMSPNPSTCWPG   AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSK+ +LQGD+ KFVNTP+PLWQQ RT AY QMTS ND LDEA GSIG
Subjt:  SMSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIG

Query:  PIRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKN
        PIRR+RH ASA T+SRRSAYFY S + ETK+E+ NI +GILP  KKNLELGGAST  LS+S+GNNNSESSLL VRP SS+VART+LEHISRNPPTPKEK 
Subjt:  PIRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKN

Query:  EELKRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPEL-SVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKN
        EELKR I WKK+ S +V T+ PN T+SLA      QK  Q DQN HP+L S KGKTVSTV P++S GR+SD VNQ+S ++K R+ + DL HK DA GLK 
Subjt:  EELKRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPEL-SVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKN

Query:  NSLLSKDVPPKIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG
        NS   KDV  KIVPA+GSE GT+ KPSPSLG KPGFPSITI KPESKWA SS+SGS FTF VS ASSG LSEPPTPSIFPSTS+G
Subjt:  NSLLSKDVPPKIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG

A0A6J1ENH0 nuclear pore complex protein NUP1-like

1.8e-248

70.97

Show/hide

Query:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS
        SSTPY  GGVGGKVRKPT+R PPPTPYARPEQNQ +RRW+SKLV PAYRLI+GGATRLLPYLFSKSL       PGDEDQ    V   L   +   E   
Subjt:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQGLRAVFGCLGLLSVFVESCS

Query:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANR
                 LPGPS +A RS    D +G QK RE DAL+GNGNF +EKWIQGKTFSRDEVSRLL IIQSRALEPS KVE+NK SPQSI KQ EQ  AANR
Subjt:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANR

Query:  VLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMS
        V+K PR EK+EDLE+AT+GNLTPHPHSS  +   AS +                    ARAYMSN+KSEPGLL +KIPDD R+LL  DHQMSKPFIP MS
Subjt:  VLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMS

Query:  PNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIR
        PNPSTCWPG   AMSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSK+ QLQGD+ KFVNTPSPLWQQSRTPAY QMTS NDP DEA GSIGP R
Subjt:  PNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIR

Query:  RIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEEL
        R+   ASAVT+SRRSAY YP+R+AETK+E+SNISEGILP  KKNLELGGAST  LS S+GNN+SESSL   RP+SS+VART+LEHISRNPPTPKEKNEEL
Subjt:  RIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEEL

Query:  KRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLL
        KR IEWK+T SS+VQT+KPN+T SLA      Q  +QVDQN HP LS KGKTVST+H + SAGRNSD VNQNS D++ R++N D K+KDDA GLK NS  
Subjt:  KRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLL

Query:  SKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG
         KD+PP KIVPALGSEVGTQ KP  SLGTKP FPSITIKKPES W +S +SGSAFTF VS ASSG +SEPPTPSIFPSTS+G
Subjt:  SKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG

A0A6J1I4G8 nuclear pore complex protein NUP1-like isoform X1

6.7e-248

70.57

Show/hide

Query:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQG-LRAVFGCLGLLSVFVESC
        SSTPY  GGVGGKVRKP +R PPPTPYARPEQNQ +RRW+SKLV PAYRLI+GGATRLLPYLFSKSL       PGDEDQ  + A        +   E  
Subjt:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQG-LRAVFGCLGLLSVFVESC

Query:  SGLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAAN
                  LPGPS +A RS    D +G Q  RE DAL+GNGNF +EKWIQGKTFSRDEVSRLLEIIQSRALEPS KVE+NK SP+SI KQ EQ  AAN
Subjt:  SGLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAAN

Query:  RVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSM
        RV+K P  EK+EDLE+AT+GNLTPHPHSS  +   AS +                    ARAYMSN+KSEPGLL +KIPDD R+LL  DHQMSK FIP M
Subjt:  RVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSM

Query:  SPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPI
        SPNPSTCWPG   AMSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSK+ QLQGD+ KFVNTPSPLWQQS TPAY QMTS NDP DEA GSIGP 
Subjt:  SPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPI

Query:  RRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEE
        RR+   ASAVT+SRRSAY YP+R+AETK+E+SNISEGILP  KKNLELGGAST  LS S+GNN+SESSLLTVRP+SS+VART+LEHISRNPPTPKEKNEE
Subjt:  RRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEE

Query:  LKRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSL
        LKR IEWK+T SS+VQT+KPN+T SLA      Q  +QVDQN HP LS KGKTVST+H + SAGRNSD VNQNS D++ R++N D K+KDDA GLK NS 
Subjt:  LKRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSL

Query:  LSKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG
          KD PP KIVPALGSEVGTQ KP  SLGTKPGFPSITIKKPES W +S +SGSAFTF VS ASSG +SEPPTPSIFPSTS+G
Subjt:  LSKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG

A0A6J1I9W7 nuclear pore complex protein NUP1-like isoform X2

6.7e-248

70.57

Show/hide

Query:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQG-LRAVFGCLGLLSVFVESC
        SSTPY  GGVGGKVRKP +R PPPTPYARPEQNQ +RRW+SKLV PAYRLI+GGATRLLPYLFSKSL       PGDEDQ  + A        +   E  
Subjt:  SSTPY--GGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSL-------PGDEDQG-LRAVFGCLGLLSVFVESC

Query:  SGLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAAN
                  LPGPS +A RS    D +G Q  RE DAL+GNGNF +EKWIQGKTFSRDEVSRLLEIIQSRALEPS KVE+NK SP+SI KQ EQ  AAN
Subjt:  SGLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAAN

Query:  RVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSM
        RV+K P  EK+EDLE+AT+GNLTPHPHSS  +   AS +                    ARAYMSN+KSEPGLL +KIPDD R+LL  DHQMSK FIP M
Subjt:  RVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSM

Query:  SPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPI
        SPNPSTCWPG   AMSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSK+ QLQGD+ KFVNTPSPLWQQS TPAY QMTS NDP DEA GSIGP 
Subjt:  SPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPI

Query:  RRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEE
        RR+   ASAVT+SRRSAY YP+R+AETK+E+SNISEGILP  KKNLELGGAST  LS S+GNN+SESSLLTVRP+SS+VART+LEHISRNPPTPKEKNEE
Subjt:  RRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEE

Query:  LKRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSL
        LKR IEWK+T SS+VQT+KPN+T SLA      Q  +QVDQN HP LS KGKTVST+H + SAGRNSD VNQNS D++ R++N D K+KDDA GLK NS 
Subjt:  LKRVIEWKKTSSSNVQTVKPNKTSSLA------QKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSL

Query:  LSKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG
          KD PP KIVPALGSEVGTQ KP  SLGTKPGFPSITIKKPES W +S +SGSAFTF VS ASSG +SEPPTPSIFPSTS+G
Subjt:  LSKDVPP-KIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTSLG

SwissProt top hits

e value

%identity

Alignment

Q9CAF4 Nuclear pore complex protein NUP1

8.4e-14

24.8

Show/hide

Query:  SSTPYG---GVGGKVRKPTARNPPPTPYARPEQNQSRR----------RWISKLVHPAYRLISGGATRLLPYLFSKSLPGDEDQGLRAVFGCLGLLSVFV
        SS PYG   G GGK RKPTAR    TPY RP  +               W+SKLV PA RLI+  A RL   L  K L   E                  
Subjt:  SSTPYG---GVGGKVRKPTARNPPPTPYARPEQNQSRR----------RWISKLVHPAYRLISGGATRLLPYLFSKSLPGDEDQGLRAVFGCLGLLSVFV

Query:  ESCSGLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSG----------------NGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEE
           + L  P       P R  N+  K     GH++   N ++                  +G   +EK +QGKTF+R EV RL  +++S+A + S   EE
Subjt:  ESCSGLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSG----------------NGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEE

Query:  NKFSPQSIGKQVEQLSAANRVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDD
         +     +G  V    +  R    P N     L     G+L       C                      I      A+AYM ++ SE  + P  +   
Subjt:  NKFSPQSIGKQVEQLSAANRVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDD

Query:  GRSLLRVDHQMSKPFIPSMSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYV
        G++       +++   P  SP  S       +     + G++TPRS RGR  +++  RTPYSR    +S  KI  L      F  +PS  W++S      
Subjt:  GRSLLRVDHQMSKPFIPSMSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYV

Query:  Q-----MTSGNDPLDEANGSIGPIRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLEL---GGASTNSLSHSMGNNNSESSLLTVR
        Q     +   +  LD   GS+GP+RRIR                     ++ L S +++   LP  +  L +   GG  T   S     +   SS   V 
Subjt:  Q-----MTSGNDPLDEANGSIGPIRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLEL---GGASTNSLSHSMGNNNSESSLLTVR

Query:  PESSKVARTMLEHISRNPPTPKEKNEELKRVIEWKKTSSSNVQTVKPNKTSSLAQKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKS
         +SS++A  +L+ + +   T ++   +L   +       S      P    +L +K+     + + +  +  ++VS      S  +  D V+  S    S
Subjt:  PESSKVARTMLEHISRNPPTPKEKNEELKRVIEWKKTSSSNVQTVKPNKTSSLAQKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKS

Query:  RINNDDLKHKDDAVGLKNNSLLSKDVPPK
        +  + D++ K   + L N+    ++ PPK
Subjt:  RINNDDLKHKDDAVGLKNNSLLSKDVPPK

Arabidopsis top hits

e value

%identity

Alignment

AT3G10650.1 BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1)

6.0e-15

24.8

Show/hide

Query:  SSTPYG---GVGGKVRKPTARNPPPTPYARPEQNQSRR----------RWISKLVHPAYRLISGGATRLLPYLFSKSLPGDEDQGLRAVFGCLGLLSVFV
        SS PYG   G GGK RKPTAR    TPY RP  +               W+SKLV PA RLI+  A RL   L  K L   E                  
Subjt:  SSTPYG---GVGGKVRKPTARNPPPTPYARPEQNQSRR----------RWISKLVHPAYRLISGGATRLLPYLFSKSLPGDEDQGLRAVFGCLGLLSVFV

Query:  ESCSGLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSG----------------NGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEE
           + L  P       P R  N+  K     GH++   N ++                  +G   +EK +QGKTF+R EV RL  +++S+A + S   EE
Subjt:  ESCSGLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSG----------------NGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEE

Query:  NKFSPQSIGKQVEQLSAANRVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDD
         +     +G  V    +  R    P N     L     G+L       C                      I      A+AYM ++ SE  + P  +   
Subjt:  NKFSPQSIGKQVEQLSAANRVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDD

Query:  GRSLLRVDHQMSKPFIPSMSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYV
        G++       +++   P  SP  S       +     + G++TPRS RGR  +++  RTPYSR    +S  KI  L      F  +PS  W++S      
Subjt:  GRSLLRVDHQMSKPFIPSMSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYV

Query:  Q-----MTSGNDPLDEANGSIGPIRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLEL---GGASTNSLSHSMGNNNSESSLLTVR
        Q     +   +  LD   GS+GP+RRIR                     ++ L S +++   LP  +  L +   GG  T   S     +   SS   V 
Subjt:  Q-----MTSGNDPLDEANGSIGPIRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLEL---GGASTNSLSHSMGNNNSESSLLTVR

Query:  PESSKVARTMLEHISRNPPTPKEKNEELKRVIEWKKTSSSNVQTVKPNKTSSLAQKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKS
         +SS++A  +L+ + +   T ++   +L   +       S      P    +L +K+     + + +  +  ++VS      S  +  D V+  S    S
Subjt:  PESSKVARTMLEHISRNPPTPKEKNEELKRVIEWKKTSSSNVQTVKPNKTSSLAQKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVNQNSPDIKS

Query:  RINNDDLKHKDDAVGLKNNSLLSKDVPPK
        +  + D++ K   + L N+    ++ PPK
Subjt:  RINNDDLKHKDDAVGLKNNSLLSKDVPPK

AT5G20200.1 nucleoporin-related

4.8e-65

33.71

Show/hide

Query:  SSTPYGGVGGKVRKPTARNPPPTPYARPEQNQSRRR-WISKLVHPAYRLISGGATRLLPYLFSKSL--------PGDEDQGLRAVFGCLGLLSVFVESCS
        SS P GGVGGK+++ +AR    TPY+RP QNQ +RR WIS++V PAYR+ISGGATR+LPY FS +         P D++Q    +          V   S
Subjt:  SSTPYGGVGGKVRKPTARNPPPTPYARPEQNQSRRR-WISKLVHPAYRLISGGATRLLPYLFSKSL--------PGDEDQGLRAVFGCLGLLSVFVESCS

Query:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFS-VEKWIQGKTFSRDEVSRLLEIIQSRALE-PSNKVEENKFSPQSIGKQVEQLSAA
           +P +  + GPS  AN +E        ++G+   AL+ +   S +E+ ++GKTFS+ E+ RL+E+I SRA++ P  K +E            + +S  
Subjt:  GLTKPVTSSLPGPSRKANRSEKFIDFDGHQKGRENDALSGNGNFS-VEKWIQGKTFSRDEVSRLLEIIQSRALE-PSNKVEENKFSPQSIGKQVEQLSAA

Query:  NRVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQ---KSEPGLLPEKIPDD-GRSLLRVDHQMSKP
        ++  K+P   K  + E       TP       +P   S+I+     +I+    ++     A+AYM  Q    S  G +     D   RS+L     + K 
Subjt:  NRVLKKPRNEKQEDLEKATFGNLTPHPHSSCYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQ---KSEPGLLPEKIPDD-GRSLLRVDHQMSKP

Query:  FIPSMSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFV-NTPSPLWQQSRTPAYVQMTSGNDPLDEAN
         + S S  PS CWPG     S  Q G+ TP+S+R  +GL NFPRTPYSR+I S SKSK++QLQ DS+K + N  SP   QS    Y Q++ G D      
Subjt:  FIPSMSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKIIQLQGDSNKFV-NTPSPLWQQSRTPAYVQMTSGNDPLDEAN

Query:  GSIGPIRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISR--NPP
        G  GP RR R +A   T S  S Y  PSR A ++ E+S I +     +   L     S + ++    +  +E   LTV   SS++ART+L+H+ R  +  
Subjt:  GSIGPIRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELGGASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISR--NPP

Query:  TPKEKNEELKRVIEWK--------KTSSSNVQTVKPNKTSSLAQKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVN------QNSPDIKSRINND
        TPK K  ELK    W+        + SSS+V  VK + ++ L +    +     P   +K    +T   ++   + +   N      Q +    + +  +
Subjt:  TPKEKNEELKRVIEWK--------KTSSSNVQTVKPNKTSSLAQKEDQVDQNYHPELSVKGKTVSTVHPKDSAGRNSDVVN------QNSPDIKSRINND

Query:  DLKHKDDAVGLKNNSL--LSKDVPPKIVPALGSEVGTQNK-PSPSLG-TKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTS
          K K       ++ L   S+D    +  + G E     K PS SLG  KP  PSI++ KP  KWAV S S + FTF VS +     SEP TPSI P T+
Subjt:  DLKHKDDAVGLKNNSL--LSKDVPPKIVPALGSEVGTQNK-PSPSLG-TKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSIFPSTS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGTCGACACCATATGGCGGAGTCGGAGGAAAAGTTCGGAAGCCAACCGCAAGAAACCCGCCGCCGACCCCTTACGCTCGGCCGGAGCAAAACCAATCGCGAAGGCG
GTGGATTTCAAAGCTCGTCCATCCGGCTTACCGGCTTATCTCCGGCGGCGCCACCCGACTGCTTCCCTATTTGTTCTCGAAATCACTGCCAGGAGATGAAGATCAAGGGC
TCAGAGCTGTGTTTGGCTGTTTGGGGCTTCTAAGTGTATTCGTGGAGAGCTGTAGTGGATTGACCAAGCCAGTGACATCTTCCTTACCTGGTCCTAGTAGAAAGGCAAAT
AGATCAGAGAAATTTATTGATTTTGATGGCCACCAAAAGGGCAGAGAAAATGATGCATTATCTGGGAATGGGAATTTTAGCGTTGAGAAATGGATCCAAGGAAAAACGTT
TTCAAGGGATGAAGTGAGTCGTTTACTAGAGATAATACAGTCAAGGGCTCTTGAACCTTCTAATAAAGTGGAAGAAAATAAATTTTCACCACAAAGCATTGGAAAACAAG
TTGAGCAGCTATCTGCCGCAAATAGAGTCTTAAAAAAGCCACGCAATGAAAAGCAAGAAGATTTGGAGAAAGCAACGTTCGGAAACTTAACTCCTCATCCACATTCATCG
TGTTATTCACCTTTTTTTGCCTCTCTAATTATTCAACATTGGATATCAGAAATTAAACGAAGTTGGAGCATCACCTGTGGCTGTGGATTTGCAAGAGCATACATGAGCAA
CCAAAAATCTGAACCAGGCTTGCTTCCTGAGAAGATACCTGATGATGGACGGTCTTTGCTTCGTGTTGATCATCAAATGTCAAAGCCCTTTATTCCATCGATGTCTCCCA
ATCCATCAACTTGTTGGCCTGGTGCCATCACTGCCATGTCAGAAAGTCAGCGTGGTTACTTAACTCCTAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGG
ACTCCATATTCTAGGAGTATCTTTTCGAAGTCTAAGTCCAAGATAATTCAGTTGCAAGGAGATTCCAATAAGTTTGTGAACACACCATCACCTCTCTGGCAGCAGTCACG
AACTCCCGCTTATGTTCAGATGACATCAGGCAATGATCCATTAGATGAGGCAAATGGTTCCATTGGACCAATTCGCAGGATTCGGCATAATGCATCTGCAGTTACTGATT
CCAGACGATCTGCTTACTTTTATCCATCCCGGAAAGCAGAGACAAAGTTAGAGAGTTCTAATATCTCGGAAGGAATTCTACCTGCTAAGAAGAAGAATTTGGAACTTGGG
GGAGCAAGCACCAATTCTCTATCACACTCAATGGGAAATAACAACTCTGAGTCAAGTCTGTTGACTGTTCGTCCAGAGTCTAGTAAGGTTGCTAGGACAATGCTAGAGCA
TATTAGTAGAAACCCACCCACTCCTAAAGAAAAGAATGAAGAGTTGAAGAGAGTTATTGAATGGAAAAAAACTTCATCTTCCAATGTACAAACGGTCAAGCCAAATAAAA
CCAGTAGTTTAGCCCAAAAAGAAGACCAAGTAGATCAGAACTATCACCCCGAATTAAGTGTTAAGGGAAAAACCGTGTCCACAGTTCATCCAAAGGATAGTGCTGGCAGA
AATTCCGATGTGGTAAACCAAAACTCTCCTGATATCAAGTCTAGAATTAACAATGATGATTTGAAACACAAGGATGACGCCGTGGGCTTAAAAAATAATAGCTTGCTGTC
TAAGGATGTTCCTCCGAAGATTGTTCCAGCTCTTGGATCTGAAGTGGGAACTCAAAATAAGCCTTCCCCATCTCTTGGAACTAAACCGGGTTTTCCTTCCATTACCATCA
AGAAGCCTGAGTCAAAATGGGCAGTTTCGTCTGAAAGTGGTTCGGCATTTACATTCCACGTTTCGAGAGCGTCCTCGGGAGGGCTCTCTGAACCTCCAACACCATCCATT
TTTCCATCAACCAGCCTCGGGATACACTCCACACTGATGCCTCAAATATTAAGTTTAGCTTTGGATCCGATGATCATACGAGACTGTCCTTTAGTTCTGTTGAGAAAGAT
GCAGTTTGTTGCTAACTGA

mRNA sequence

Show/hide mRNA sequence

GCCAGTTTCACACACATTTATTTACTTTACTTAGCACATTTTACGACATGTCGTTTCAAGTAGAAACTAGACAAAATGTTCAACCAACATTTGGCTCGCAGTCGTCGTCA
TAAAGTCGACGCGACGGTGTTCTTACTGCGAGCAGCCACCGTTCACGGCGGAGCAGCCACAGGATAGGGCGGAGGAACGGATGTCGTCGACACCATATGGCGGAGTCGGA
GGAAAAGTTCGGAAGCCAACCGCAAGAAACCCGCCGCCGACCCCTTACGCTCGGCCGGAGCAAAACCAATCGCGAAGGCGGTGGATTTCAAAGCTCGTCCATCCGGCTTA
CCGGCTTATCTCCGGCGGCGCCACCCGACTGCTTCCCTATTTGTTCTCGAAATCACTGCCAGGAGATGAAGATCAAGGGCTCAGAGCTGTGTTTGGCTGTTTGGGGCTTC
TAAGTGTATTCGTGGAGAGCTGTAGTGGATTGACCAAGCCAGTGACATCTTCCTTACCTGGTCCTAGTAGAAAGGCAAATAGATCAGAGAAATTTATTGATTTTGATGGC
CACCAAAAGGGCAGAGAAAATGATGCATTATCTGGGAATGGGAATTTTAGCGTTGAGAAATGGATCCAAGGAAAAACGTTTTCAAGGGATGAAGTGAGTCGTTTACTAGA
GATAATACAGTCAAGGGCTCTTGAACCTTCTAATAAAGTGGAAGAAAATAAATTTTCACCACAAAGCATTGGAAAACAAGTTGAGCAGCTATCTGCCGCAAATAGAGTCT
TAAAAAAGCCACGCAATGAAAAGCAAGAAGATTTGGAGAAAGCAACGTTCGGAAACTTAACTCCTCATCCACATTCATCGTGTTATTCACCTTTTTTTGCCTCTCTAATT
ATTCAACATTGGATATCAGAAATTAAACGAAGTTGGAGCATCACCTGTGGCTGTGGATTTGCAAGAGCATACATGAGCAACCAAAAATCTGAACCAGGCTTGCTTCCTGA
GAAGATACCTGATGATGGACGGTCTTTGCTTCGTGTTGATCATCAAATGTCAAAGCCCTTTATTCCATCGATGTCTCCCAATCCATCAACTTGTTGGCCTGGTGCCATCA
CTGCCATGTCAGAAAGTCAGCGTGGTTACTTAACTCCTAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACTCCATATTCTAGGAGTATCTTTTCGAAG
TCTAAGTCCAAGATAATTCAGTTGCAAGGAGATTCCAATAAGTTTGTGAACACACCATCACCTCTCTGGCAGCAGTCACGAACTCCCGCTTATGTTCAGATGACATCAGG
CAATGATCCATTAGATGAGGCAAATGGTTCCATTGGACCAATTCGCAGGATTCGGCATAATGCATCTGCAGTTACTGATTCCAGACGATCTGCTTACTTTTATCCATCCC
GGAAAGCAGAGACAAAGTTAGAGAGTTCTAATATCTCGGAAGGAATTCTACCTGCTAAGAAGAAGAATTTGGAACTTGGGGGAGCAAGCACCAATTCTCTATCACACTCA
ATGGGAAATAACAACTCTGAGTCAAGTCTGTTGACTGTTCGTCCAGAGTCTAGTAAGGTTGCTAGGACAATGCTAGAGCATATTAGTAGAAACCCACCCACTCCTAAAGA
AAAGAATGAAGAGTTGAAGAGAGTTATTGAATGGAAAAAAACTTCATCTTCCAATGTACAAACGGTCAAGCCAAATAAAACCAGTAGTTTAGCCCAAAAAGAAGACCAAG
TAGATCAGAACTATCACCCCGAATTAAGTGTTAAGGGAAAAACCGTGTCCACAGTTCATCCAAAGGATAGTGCTGGCAGAAATTCCGATGTGGTAAACCAAAACTCTCCT
GATATCAAGTCTAGAATTAACAATGATGATTTGAAACACAAGGATGACGCCGTGGGCTTAAAAAATAATAGCTTGCTGTCTAAGGATGTTCCTCCGAAGATTGTTCCAGC
TCTTGGATCTGAAGTGGGAACTCAAAATAAGCCTTCCCCATCTCTTGGAACTAAACCGGGTTTTCCTTCCATTACCATCAAGAAGCCTGAGTCAAAATGGGCAGTTTCGT
CTGAAAGTGGTTCGGCATTTACATTCCACGTTTCGAGAGCGTCCTCGGGAGGGCTCTCTGAACCTCCAACACCATCCATTTTTCCATCAACCAGCCTCGGGATACACTCC
ACACTGATGCCTCAAATATTAAGTTTAGCTTTGGATCCGATGATCATACGAGACTGTCCTTTAGTTCTGTTGAGAAAGATGCAGTTTGTTGCTAACTGA

Protein sequence

Show/hide protein sequence

MSSTPYGGVGGKVRKPTARNPPPTPYARPEQNQSRRRWISKLVHPAYRLISGGATRLLPYLFSKSLPGDEDQGLRAVFGCLGLLSVFVESCSGLTKPVTSSLPGPSRKAN
RSEKFIDFDGHQKGRENDALSGNGNFSVEKWIQGKTFSRDEVSRLLEIIQSRALEPSNKVEENKFSPQSIGKQVEQLSAANRVLKKPRNEKQEDLEKATFGNLTPHPHSS
CYSPFFASLIIQHWISEIKRSWSITCGCGFARAYMSNQKSEPGLLPEKIPDDGRSLLRVDHQMSKPFIPSMSPNPSTCWPGAITAMSESQRGYLTPRSQRGRFGLHNFPR
TPYSRSIFSKSKSKIIQLQGDSNKFVNTPSPLWQQSRTPAYVQMTSGNDPLDEANGSIGPIRRIRHNASAVTDSRRSAYFYPSRKAETKLESSNISEGILPAKKKNLELG
GASTNSLSHSMGNNNSESSLLTVRPESSKVARTMLEHISRNPPTPKEKNEELKRVIEWKKTSSSNVQTVKPNKTSSLAQKEDQVDQNYHPELSVKGKTVSTVHPKDSAGR
NSDVVNQNSPDIKSRINNDDLKHKDDAVGLKNNSLLSKDVPPKIVPALGSEVGTQNKPSPSLGTKPGFPSITIKKPESKWAVSSESGSAFTFHVSRASSGGLSEPPTPSI
FPSTSLGIHSTLMPQILSLALDPMIIRDCPLVLLRKMQFVAN

Sed0021917 (gene) of Chayote v1 genome