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Sed0021947 (gene) of Chayote v1 genome

Gene IDSed0021947
OrganismSechium edule (Chayote v1)
Descriptionarabinogalactan peptide 23-like
Genome locationLG09:37860636..37861599
RNA-Seq ExpressionSed0021947
SyntenySed0021947
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593311.1 hypothetical protein SDJN03_12787, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1187.27Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF
        MKK A A LFAAATVTAVVA DES+SPAAAPGPSSAASAALPALGSLVGAS  RF
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF
KAG7025661.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-1071.43Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRFYYSNFGISFFLFHFS
        MKK A A LFAAATVTAVVA DES+SPAAAPGPSSAASAALPALGSLVGAS          +SF  F+F+
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRFYYSNFGISFFLFHFS
XP_022933008.1 arabinogalactan peptide 23-like [Cucurbita moschata]7.8e-1078.69Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF--YYSN
        MKK A A LFAAATVTAVVA DES+SPAAAPGPSSAASA LPALGSLVGAS      YY N
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF--YYSN
XP_022960230.1 arabinogalactan peptide 23-like [Cucurbita moschata]1.0e-0970Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRFYYSNFGISFFLFHFS
        MKK A A LFAAAT+TAVVA DES+SPAAAPGPSSAASAALPALGSLVGAS          +SF  F+F+
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRFYYSNFGISFFLFHFS
XP_023004714.1 arabinogalactan peptide 23-like [Cucurbita maxima]5.4e-1181.97Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF--YYSN
        MKK A A LFAAATVTAVVA DES+SPAAAPGPSSAASAALPALGSLVGAS   F  YY N
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF--YYSN
TrEMBL top hitse value%identityAlignment
A0A1S3CDX5 arabinogalactan peptide 23-like6.7e-0769.49Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRFYYSN
        MKK A A LFAAA V+A VA DES+SPAAAPGPSSAASAALP LG+ V  SF   Y+ N
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRFYYSN
A0A6J1F3F5 arabinogalactan peptide 23-like3.8e-1078.69Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF--YYSN
        MKK A A LFAAATVTAVVA DES+SPAAAPGPSSAASA LPALGSLVGAS      YY N
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF--YYSN
A0A6J1H8I1 arabinogalactan peptide 23-like4.9e-1070Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRFYYSNFGISFFLFHFS
        MKK A A LFAAAT+TAVVA DES+SPAAAPGPSSAASAALPALGSLVGAS          +SF  F+F+
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRFYYSNFGISFFLFHFS
A0A6J1IYE9 arabinogalactan peptide 23-like3.5e-0876.36Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF
        MK  A   LF AA VTAVVA DES SPAAAPGPSSAASAALPALGSL+GAS   F
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF
A0A6J1KX42 arabinogalactan peptide 23-like2.6e-1181.97Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF--YYSN
        MKK A A LFAAATVTAVVA DES+SPAAAPGPSSAASAALPALGSLVGAS   F  YY N
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRF--YYSN
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 232.9e-0770.59Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGAS
        MKK A   LFAAA++TAV+A +E  +P  APGP+SAASAALPALGSLVGAS
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGAS
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)3.1e-0454.84Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGP-SSAASAALPALGSLVGASFDRF--YYSN
        MKK A   +FAAA++TAV+A +     A APGP +S AS A+PALGSLVGAS      YY N
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGP-SSAASAALPALGSLVGASFDRF--YYSN
AT3G57690.1 arabinogalactan protein 232.1e-0870.59Show/hide
Query:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGAS
        MKK A   LFAAA++TAV+A +E  +P  APGP+SAASAALPALGSLVGAS
Subjt:  MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGTTTGCCTATGCCACCCTCTTTGCTGCCGCTACCGTCACCGCAGTCGTGGCCTTCGATGAGTCGGTCTCCCCGGCTGCTGCACCGGGACCGAGCAGCGCTGC
CTCCGCTGCTCTTCCCGCTCTTGGATCGCTCGTCGGCGCTTCCTTTGATAGATTCTATTATTCAAATTTTGGAATTTCTTTTTTCCTTTTTCATTTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGTTTGCCTATGCCACCCTCTTTGCTGCCGCTACCGTCACCGCAGTCGTGGCCTTCGATGAGTCGGTCTCCCCGGCTGCTGCACCGGGACCGAGCAGCGCTGC
CTCCGCTGCTCTTCCCGCTCTTGGATCGCTCGTCGGCGCTTCCTTTGATAGATTCTATTATTCAAATTTTGGAATTTCTTTTTTCCTTTTTCATTTTTCTTGA
Protein sequenceShow/hide protein sequence
MKKFAYATLFAAATVTAVVAFDESVSPAAAPGPSSAASAALPALGSLVGASFDRFYYSNFGISFFLFHFS