CuGenDBv2

Gene ID	Sed0021976
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG07:5396968..5400668
RNA-Seq Expression	Sed0021976
Synteny	Sed0021976
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593358.1 hypothetical protein SDJN03_12834, partial [Cucurbita argyrosperma subsp. sororia]

3.8e-36

90.43

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPS+RK FPPNELGSW+TLV+RHRFLLTAL LLTFLCTIYLYFAVTL  SSSC GL GAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

KAG7025704.1 hypothetical protein SDJN02_12202, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.8e-36

90.43

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPS+RK FPPNELGSW+TLV+RHRFLLTAL LLTFLCTIYLYFAVTL  SSSC GL GAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

XP_022155001.1 uncharacterized protein LOC111022141 [Momordica charantia]

1.3e-36

86.17

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPS+RKPFPPNE GSW+TLV+RHRFLLTAL LLTFLCTIYLYFAVTL  SSSCFG+ G QK QC+LELAK SMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

XP_022959742.1 uncharacterized protein LOC111460722 [Cucurbita moschata]

3.8e-36

90.43

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPS+RK FPPNELGSW+TLV+RHRFLLTAL LLTFLCTIYLYFAVTL  SSSC GL GAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

XP_023004762.1 uncharacterized protein LOC111497967 [Cucurbita maxima]

5.0e-36

89.36

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPS+RK FPPNELGSW+TL++RHRFLLTAL LLTFLCTIYLYFAVTL  SSSC GL GAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6S1 Uncharacterized protein

1.6e-35

88.3

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPS+RK F PNELGSW+TLV+RHRFLLTAL LLTFLCTIYLYFAVTL  SSSCFGL G QKAQC LELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

A0A5D3CG60 Uncharacterized protein

2.7e-35

87.23

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPS+RK F PNELGSW+TL++RHRFLLTAL LLTFLCTIYLYFAVTL  SSSCFGL G QKAQCQLELAKTS+AKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

A0A6J1DQE0 uncharacterized protein LOC111022141

6.4e-37

86.17

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPS+RKPFPPNE GSW+TLV+RHRFLLTAL LLTFLCTIYLYFAVTL  SSSCFG+ G QK QC+LELAK SMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

A0A6J1H8Z6 uncharacterized protein LOC111460722

1.9e-36

90.43

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPS+RK FPPNELGSW+TLV+RHRFLLTAL LLTFLCTIYLYFAVTL  SSSC GL GAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

A0A6J1KRB5 uncharacterized protein LOC111497967

2.4e-36

89.36

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPS+RK FPPNELGSW+TL++RHRFLLTAL LLTFLCTIYLYFAVTL  SSSC GL GAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G16170.1 unknown protein

6.8e-23

60.22

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTL-SPSSSCFGLNGAQKAQCQLELAKTSMAKGKLK
        MVLD ++SSP RR    +K +  +ELGSW+TL++RH++LLTALALL FLCT+YLYFAVTL +  SSC+GL G  KA CQL+L + +++KGKLK
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTL-SPSSSCFGLNGAQKAQCQLELAKTSMAKGKLK

AT1G79660.1 unknown protein

1.0e-18

53.76

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Query:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSS-SCFGLNGAQKAQCQLELAKTSMAKGKLK
        MVLD ++SSP RR  + +K +  ++LGS +T+V+RHRFLLTA+ LL FLCTIY+YFAVTL      C G+ G  KA CQ+E  + S + GKLK
Subjt:  MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSS-SCFGLNGAQKAQCQLELAKTSMAKGKLK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTTCTTGACAGTGTCCTGTCTTCTCCACACAGGAGGTCCCCATCATATCGAAAGCCCTTTCCTCCAAATGAGTTGGGTAGTTGGACGACTCTCGTTCGGCGGCATCG
CTTCCTCCTGACAGCACTCGCCCTCTTGACATTTCTTTGCACGATTTACCTTTACTTTGCTGTCACCTTAAGCCCTTCCTCCTCTTGCTTTGGACTGAATGGGGCGCAAA
AAGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAAAATTCTTTGA

mRNA sequence

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GTAATAATATGGCGGCCCTAGGCCCCAACGAAGAGGCACCATTGAAAGGGCCGGATTTACATGGCTGCCACTCATGAGTCATGACCCACCTGCCCTGCTCGTCTCTCTCT
CTCTCTCTCTCTAAATACACCATTCTTTCTCTCTCTACAAAGGTTTCCAACTCTGGAAACCGTGTGAACGCCCCTTTCCGCATCTTTTTCCCCCACAATCATCGATTCAG
CTAATTCTCTGTAATTTACCTCCATTCTACTTCTGGGTTTTGATTTTGCTGACTGAGGAGGTTGGATCATGCGACATGGTTCTTGACAGTGTCCTGTCTTCTCCACACAG
GAGGTCCCCATCATATCGAAAGCCCTTTCCTCCAAATGAGTTGGGTAGTTGGACGACTCTCGTTCGGCGGCATCGCTTCCTCCTGACAGCACTCGCCCTCTTGACATTTC
TTTGCACGATTTACCTTTACTTTGCTGTCACCTTAAGCCCTTCCTCCTCTTGCTTTGGACTGAATGGGGCGCAAAAAGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCC
ATGGCTAAAGGGAAACTGAAAATTCTTTGATACTCGAGTTTGTGATCCAAAACTTGTGTTTTTTGTTTGTAGTTCTCGACAATTTGGGCCGAAGATTTTCGAAACAGTTA
GTTTGTCATACAATGCTGTGTAGTAATATGTAAGTGACTACATGATATCCGAGAAAGAAAAATTCTTCTAAAAAAAAGGTATTGATCAATCATTTTGTGTTTACAGATTT
GTGATGTATACGCTCTACAGTGCATGAAAATGATGTGTTTTATTTGAACAATTGACTGGTGCTTTTAAGATGCCTGAAACCTGTTTGGTTGACTCATGAATGGCTATGTG
TATAAAAAGTGAGAGACTTGATCTGTAATTGAGAATTGAGATGAATTATCTGTTATATGGTTAGTGTTTTGCTGACTATATTTGG

Protein sequence

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MVLDSVLSSPHRRSPSYRKPFPPNELGSWTTLVRRHRFLLTALALLTFLCTIYLYFAVTLSPSSSCFGLNGAQKAQCQLELAKTSMAKGKLKIL

Sed0021976 (gene) of Chayote v1 genome