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Sed0021979 (gene) of Chayote v1 genome

Gene IDSed0021979
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:18533549..18534252
RNA-Seq ExpressionSed0021979
SyntenySed0021979
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC12618.1 hypothetical protein L484_012996 [Morus notabilis]1.4e-2142.58Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPSVSKFS---CFRDFEALAL-----RSSPAPAS-----FSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEED
        M+HRKV SQG++PF WE+KP +SK +   C +D+ + AL     +SSP   +      S G +     +D++  KIPPPPC  QP   S    G RW+ED
Subjt:  MSHRKVLSQGNVPFSWEEKPSVSKFS---CFRDFEALAL-----RSSPAPAS-----FSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEED

Query:  PFQVAYKECTKSVKNG----------KFVKKTKFFGFSCKSVGSCEIRDHGYFKL
        PF +AYKECTK VK G          K + K+ F  FSCK+  SCE+R+  + KL
Subjt:  PFQVAYKECTKSVKNG----------KFVKKTKFFGFSCKSVGSCEIRDHGYFKL

KAF4375181.1 hypothetical protein F8388_017327 [Cannabis sativa]9.6e-2347.18Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPSVSKFSCFRD-FEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNA--GSRWEEDPFQVAYKECT
        MSHRKV SQG++PFSWE+KP +SK +      +AL L SSP+P+        S   +D+V  KIP PPC    + PS  N+  G +W+EDPF +AYKECT
Subjt:  MSHRKVLSQGNVPFSWEEKPSVSKFSCFRD-FEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNA--GSRWEEDPFQVAYKECT

Query:  KSVKNG-----KFVKKTKFFGFSCKSVGSCEIRDHGYFKLPS
        K  K G       V+KT F  FSCKS  SC++R+  + KLP+
Subjt:  KSVKNG-----KFVKKTKFFGFSCKSVGSCEIRDHGYFKLPS

KAG6594957.1 hypothetical protein SDJN03_11510, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3259.15Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKI-PPPPCRLQPRRPSVRNA---GSRWEEDPFQVAYKEC
        MSH+K+ S+GNVPFSWEEKP +SK  CF+D + L L          H      ++DD  VGKI PPPPCR+QP   S+RNA   GSRWEEDPF  AYKEC
Subjt:  MSHRKVLSQGNVPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKI-PPPPCRLQPRRPSVRNA---GSRWEEDPFQVAYKEC

Query:  TKSVKNGKFV-KKTKFFGFSCKSVGSCEIRDHGYFKLPSDRI
        TKSVK GK V KK+K FGF CKS  SCEIRD   FKL  D I
Subjt:  TKSVKNGKFV-KKTKFFGFSCKSVGSCEIRDHGYFKLPSDRI

KAG6604109.1 hypothetical protein SDJN03_04718, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2361.11Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEEDPFQVAYKECTKSV
        M+HRKVLSQ N+PFSWE+ P+ SKF  FRDF+ALAL+  P+P+S  H G+   ++D  VV KIPPPP R QPR  S+RNA ++ E+DPF +AYKECTKSV
Subjt:  MSHRKVLSQGNVPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEEDPFQVAYKECTKSV

Query:  KNGKFVKK
        KNG FV++
Subjt:  KNGKFVKK

KGN48633.1 hypothetical protein Csa_003745 [Cucumis sativus]4.8e-2250.68Show/hide
Query:  HRKVLSQGN-VPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEE--DPFQVAYKECTKS
        HRK+LSQGN +P   +  P VSK   FRDF+ALAL      +S     + + ++D +V  KIPPPPCRL    P   NA S  EE  DPF +AYKECTKS
Subjt:  HRKVLSQGN-VPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEE--DPFQVAYKECTKS

Query:  VKNGKF------VKKTKF-FG-FSCKSVGSCEIRDHGYFKLPSDRI
        VKN         VKK+KF FG FSCK++ SC+I D+ +FKLP D I
Subjt:  VKNGKF------VKKTKF-FG-FSCKSVGSCEIRDHGYFKLPSDRI

TrEMBL top hitse value%identityAlignment
A0A0A0KGJ1 Uncharacterized protein2.3e-2250.68Show/hide
Query:  HRKVLSQGN-VPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEE--DPFQVAYKECTKS
        HRK+LSQGN +P   +  P VSK   FRDF+ALAL      +S     + + ++D +V  KIPPPPCRL    P   NA S  EE  DPF +AYKECTKS
Subjt:  HRKVLSQGN-VPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEE--DPFQVAYKECTKS

Query:  VKNGKF------VKKTKF-FG-FSCKSVGSCEIRDHGYFKLPSDRI
        VKN         VKK+KF FG FSCK++ SC+I D+ +FKLP D I
Subjt:  VKNGKF------VKKTKF-FG-FSCKSVGSCEIRDHGYFKLPSDRI

A0A5D3CLL9 Uncharacterized protein8.8e-2249.66Show/hide
Query:  HRKVLSQGNVPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEE--DPFQVAYKECTKSV
        HRKVLSQGN+    +  P +SK   FRDF+ALAL    + +S ++    + ++D +V  KIPPPPCR  P      NA S  EE  DPF VAYKECTKSV
Subjt:  HRKVLSQGNVPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEE--DPFQVAYKECTKSV

Query:  KNGKF-----VKKTKFF--GFSCKSVGSCEIRD-HGYFKLPSDRI
        KN        VKK+KFF   FSCK++ SC+I D + +FKLP D I
Subjt:  KNGKF-----VKKTKFF--GFSCKSVGSCEIRD-HGYFKLPSDRI

A0A7J6I4Y5 Uncharacterized protein4.7e-2347.18Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPSVSKFSCFRD-FEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNA--GSRWEEDPFQVAYKECT
        MSHRKV SQG++PFSWE+KP +SK +      +AL L SSP+P+        S   +D+V  KIP PPC    + PS  N+  G +W+EDPF +AYKECT
Subjt:  MSHRKVLSQGNVPFSWEEKPSVSKFSCFRD-FEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNA--GSRWEEDPFQVAYKECT

Query:  KSVKNG-----KFVKKTKFFGFSCKSVGSCEIRDHGYFKLPS
        K  K G       V+KT F  FSCKS  SC++R+  + KLP+
Subjt:  KSVKNG-----KFVKKTKFFGFSCKSVGSCEIRDHGYFKLPS

A0A803PEU5 Uncharacterized protein4.7e-2347.18Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPSVSKFSCFRD-FEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNA--GSRWEEDPFQVAYKECT
        MSHRKV SQG++PFSWE+KP +SK +      +AL L SSP+P+        S   +D+V  KIP PPC    + PS  N+  G +W+EDPF +AYKECT
Subjt:  MSHRKVLSQGNVPFSWEEKPSVSKFSCFRD-FEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNA--GSRWEEDPFQVAYKECT

Query:  KSVKNG-----KFVKKTKFFGFSCKSVGSCEIRDHGYFKLPS
        K  K G       V+KT F  FSCKS  SC++R+  + KLP+
Subjt:  KSVKNG-----KFVKKTKFFGFSCKSVGSCEIRDHGYFKLPS

W9RVC8 Uncharacterized protein6.7e-2242.58Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPSVSKFS---CFRDFEALAL-----RSSPAPAS-----FSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEED
        M+HRKV SQG++PF WE+KP +SK +   C +D+ + AL     +SSP   +      S G +     +D++  KIPPPPC  QP   S    G RW+ED
Subjt:  MSHRKVLSQGNVPFSWEEKPSVSKFS---CFRDFEALAL-----RSSPAPAS-----FSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEED

Query:  PFQVAYKECTKSVKNG----------KFVKKTKFFGFSCKSVGSCEIRDHGYFKL
        PF +AYKECTK VK G          K + K+ F  FSCK+  SCE+R+  + KL
Subjt:  PFQVAYKECTKSVKNG----------KFVKKTKFFGFSCKSVGSCEIRDHGYFKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCACAGAAAAGTCCTGTCCCAAGGAAATGTTCCCTTTTCGTGGGAGGAAAAGCCCAGCGTTTCCAAATTCAGCTGCTTCCGAGATTTCGAAGCCCTTGCCTTGCG
GTCCTCGCCCGCGCCCGCATCGTTCTCCCACGGAGGAGAGTATTCTGAGAAATACGACGACGTTGTTGTTGGTAAGATTCCCCCGCCGCCTTGCCGACTGCAGCCGCGTC
GTCCTTCGGTTAGAAACGCCGGAAGCCGGTGGGAGGAGGACCCTTTTCAGGTGGCGTATAAGGAGTGTACTAAAAGTGTCAAAAATGGGAAGTTTGTGAAGAAGACTAAG
TTTTTTGGTTTTTCTTGTAAGAGTGTTGGTTCTTGTGAAATTAGAGATCATGGTTACTTCAAACTTCCTAGTGATAGAATTGGAAATAGGAGGTATGAGTAA
mRNA sequenceShow/hide mRNA sequence
GTGCATAAGCCTTTTATTTCACAATTATCATTTTGACATAACATTATGAGCCACAGAAAAGTCCTGTCCCAAGGAAATGTTCCCTTTTCGTGGGAGGAAAAGCCCAGCGT
TTCCAAATTCAGCTGCTTCCGAGATTTCGAAGCCCTTGCCTTGCGGTCCTCGCCCGCGCCCGCATCGTTCTCCCACGGAGGAGAGTATTCTGAGAAATACGACGACGTTG
TTGTTGGTAAGATTCCCCCGCCGCCTTGCCGACTGCAGCCGCGTCGTCCTTCGGTTAGAAACGCCGGAAGCCGGTGGGAGGAGGACCCTTTTCAGGTGGCGTATAAGGAG
TGTACTAAAAGTGTCAAAAATGGGAAGTTTGTGAAGAAGACTAAGTTTTTTGGTTTTTCTTGTAAGAGTGTTGGTTCTTGTGAAATTAGAGATCATGGTTACTTCAAACT
TCCTAGTGATAGAATTGGAAATAGGAGGTATGAGTAACTCTACATCATTTTTACTTTTCATGATTCTCCAATTATTTGAAGGTTCTAGTTTTATACTACCAAATGTTTTG
GAATATTACATCATATGATCATATATATGATGTAAAAATTTGAACTTACTTTCCAAATTTATACTACTTAAAAAAAAAAAGAAATACCAAACTTATTCCGATTATGTATT
CAGGTGGATGGTTATTTTTTTTTTAAAGAATATTTGAACTCATA
Protein sequenceShow/hide protein sequence
MSHRKVLSQGNVPFSWEEKPSVSKFSCFRDFEALALRSSPAPASFSHGGEYSEKYDDVVVGKIPPPPCRLQPRRPSVRNAGSRWEEDPFQVAYKECTKSVKNGKFVKKTK
FFGFSCKSVGSCEIRDHGYFKLPSDRIGNRRYE