; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0021982 (gene) of Chayote v1 genome

Gene IDSed0021982
OrganismSechium edule (Chayote v1)
DescriptionHMG-Y-related protein A-like
Genome locationLG05:38320612..38322977
RNA-Seq ExpressionSed0021982
SyntenySed0021982
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR000116 - High mobility group protein HMGA
IPR005818 - Linker histone H1/H5, domain H15
IPR017956 - AT hook, DNA-binding motif
IPR031059 - High mobility group protein HMGA, plant
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145857.1 HMG-Y-related protein A isoform X2 [Cucumis sativus]8.8e-7484.36Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT+ +NKPPSLPPYPEMI+RAIEAL+SD+GSNKS ISKYIESTYGNLPTGHSSLLTHHL+MMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV
          +   SP K RGRPPKDPNAPPK P+PVQMKVSSGTGK RGRPRKFPQ  +T APPAPSGRPRGRPPKVKA LTE SV
Subjt:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV

XP_008456999.1 PREDICTED: HMG-Y-related protein A-like [Cucumis melo]2.7e-7585.47Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT+ +NKPPSLPPYPEMI+RAIEAL+SD+GSNKS ISKYIESTYGNLPTGHSSLLTHHL+MMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV
          ++A+SP K RGRPPKDPNAPPK P+PVQMKVSSGTGK RGRPRKFPQ  TT APPAPSGRPRGRPPKVKA LTE SV
Subjt:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV

XP_022143283.1 HMG-Y-related protein A-like [Momordica charantia]1.1e-7383.8Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT  +NKPPSLPPYPEMI+RAIEAL+SD+GSNKS ISKYIESTYGNLPTGHSSLLTHHL+MMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV
           A+ SP K RGRPPKDPNAPP+ P+PV MKVSSGTGK RGRPRK  +P + TAPPAPSGRPRGRPPK KAPLTE  V
Subjt:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV

XP_022935331.1 HMG-Y-related protein A-like [Cucurbita moschata]8.5e-7785.16Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MA E +NKPPSLPPYPEMI+RAIEAL+SD+GSNKS ISKYIESTYGNLPTGHSSLLTHHL+MMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK KVPLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPK----PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV
        PG + LSP K RGRPPKDPNAPPK    P+PVQMKVSSGTGK RGRPRKFP+P T  APP PSGRPRGRPPKVK PLTE SV
Subjt:  PGAAALSPAKLRGRPPKDPNAPPK----PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV

XP_038878302.1 HMG-Y-related protein A-like [Benincasa hispida]1.0e-7484.36Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MATE +NKPPSLPPYPEMI+RAIEAL+S++GSNKS ISKYIESTYGNLPTGHSSLLTHHL+MMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPK PLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV
        P ++ LSP K RGRPPKDPNAPPK P+PVQMKVSSGTGK+RGRPRKFP   T  +PP PSGRPRGRPPKVK  LTE SV
Subjt:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV

TrEMBL top hitse value%identityAlignment
A0A0A0LCH9 H15 domain-containing protein4.2e-7484.36Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT+ +NKPPSLPPYPEMI+RAIEAL+SD+GSNKS ISKYIESTYGNLPTGHSSLLTHHL+MMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV
          +   SP K RGRPPKDPNAPPK P+PVQMKVSSGTGK RGRPRKFPQ  +T APPAPSGRPRGRPPKVKA LTE SV
Subjt:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV

A0A1S3C432 HMG-Y-related protein A-like1.3e-7585.47Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT+ +NKPPSLPPYPEMI+RAIEAL+SD+GSNKS ISKYIESTYGNLPTGHSSLLTHHL+MMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV
          ++A+SP K RGRPPKDPNAPPK P+PVQMKVSSGTGK RGRPRKFPQ  TT APPAPSGRPRGRPPKVKA LTE SV
Subjt:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV

A0A5D3DJY3 HMG-Y-related protein A-like1.3e-7585.47Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT+ +NKPPSLPPYPEMI+RAIEAL+SD+GSNKS ISKYIESTYGNLPTGHSSLLTHHL+MMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV
          ++A+SP K RGRPPKDPNAPPK P+PVQMKVSSGTGK RGRPRKFPQ  TT APPAPSGRPRGRPPKVKA LTE SV
Subjt:  PGAAALSPAKLRGRPPKDPNAPPK-PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV

A0A6J1F494 HMG-Y-related protein A-like4.1e-7785.16Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MA E +NKPPSLPPYPEMI+RAIEAL+SD+GSNKS ISKYIESTYGNLPTGHSSLLTHHL+MMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK KVPLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPK----PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV
        PG + LSP K RGRPPKDPNAPPK    P+PVQMKVSSGTGK RGRPRKFP+P T  APP PSGRPRGRPPKVK PLTE SV
Subjt:  PGAAALSPAKLRGRPPKDPNAPPK----PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV

A0A6J1J6G8 HMG-Y-related protein A-like4.1e-7785.16Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MA E +NKPPSLPPYPEMI+RAIEAL+SD+GSNKS ISKYIESTYGNLPTGHSSLLTHHL+MMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK KVPLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPK----PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV
        PG + LSP K RGRPPKDPNAPPK    P+PVQMKVSSGTGK RGRPRKFP+P T  APP PSGRPRGRPPKVK PLTE SV
Subjt:  PGAAALSPAKLRGRPPKDPNAPPK----PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV

SwissProt top hitse value%identityAlignment
P37218 Histone H11.5e-0429.89Show/hide
Query:  PSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAP----------PRRGRGRP-PKPKVP
        P+ PPY EMI  AI  L   +GS++ AI+K+IE    +LP+    LL   L    AS +LV  KN+Y     + P          P   + +P  KPK  
Subjt:  PSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAP----------PRRGRGRP-PKPKVP

Query:  LPPGAAALSPAKLRGRPPKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPE-TTTAPPAPSGRPRGRPPKVKA
        + P A   + AK   +    P A  KP       +     ++ +P    +P+    A P  + +P+  P K KA
Subjt:  LPPGAAALSPAKLRGRPPKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPE-TTTAPPAPSGRPRGRPPKVKA

Q00423 HMG-Y-related protein A1.3e-5164.25Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MATE +NKP SLPPYPEMI + +EAL+  +GSNKSAISKYIE+TYG LP   +++L  HL+ MK SGEL F +NNYMK DP APP+RGRGRPPKPK PLP
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  PGAAALSPAKLRGRPPKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPA-PSGRPRGRPPKVKAPLTEASV
        PG   +SP + RGRPPKDPNAPPK    + K + G+G+ RGRP+K P+     AP A  SGRPRGRPPKVK  LTE SV
Subjt:  PGAAALSPAKLRGRPPKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPA-PSGRPRGRPPKVKAPLTEASV

Q10370 HMG-Y-related protein B (Fragment)6.6e-4062.58Show/hide
Query:  ALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPPGAAALSPAKLRGRPPKDPNAPPK
        AL+   GSNKSAISKYIE+TYG LP    ++L  HL+ MK SGEL F +NNYMK DP APP+RGRGRPPKPKVPLPPG   +SP + RGRPPKDPNAPPK
Subjt:  ALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPPGAAALSPAKLRGRPPKDPNAPPK

Query:  PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPS-GRPRGRPPKVKAPLTEASV
            + K +  TG+ RGRP+K  +     +P A S GRPRGRPPKVK  LTE SV
Subjt:  PEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPS-GRPRGRPPKVKAPLTEASV

Q43386 HMG-Y-related protein A2.7e-3350.28Show/hide
Query:  SLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPPGAAALS---
        SLPPYP+MI  AIE+L+  +G NK+ I+K+IEST   LP  H +LL++HL+ MK +G+L+  KNNYMK DP APP+RGRGRPPK K      AAA +   
Subjt:  SLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPPGAAALS---

Query:  -------PAKLRGRP--PKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPET-TTAPPAPSG------RPRGRPPKVK
               P + RGRP  PKDP+ PP     Q KV +G+G+ RGRP K P+ ++ T A P P+       R RGRPPKVK
Subjt:  -------PAKLRGRP--PKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPET-TTAPPAPSG------RPRGRPPKVK

Q9FYS5 HMG-Y-related protein A2.4e-3452.15Show/hide
Query:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRD-PTAPPRRGRGRPPKPKVPL
        MAT+   KP  +PPYPEMI  AIE L   SGSNKSAISKYIE  YG+LP  H+SLLT HL+ MK SGELVF KNNY +   P APP+RGRGRPPK + P 
Subjt:  MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRD-PTAPPRRGRGRPPKPKVPL

Query:  PPGAAALSPAKL---RGRPPKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPETTTAP-----PAPSG-------RPRGRPPKVK
         P  A  SP+     RGRPPK   A    E    + ++G  K RGRP K  + +   +P     PAP+G       R RGRPPKV+
Subjt:  PPGAAALSPAKL---RGRPPKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPETTTAP-----PAPSG-------RPRGRPPKVK

Arabidopsis top hitse value%identityAlignment
AT1G14900.1 high mobility group A1.9e-3450.28Show/hide
Query:  SLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPPGAAALS---
        SLPPYP+MI  AIE+L+  +G NK+ I+K+IEST   LP  H +LL++HL+ MK +G+L+  KNNYMK DP APP+RGRGRPPK K      AAA +   
Subjt:  SLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPPGAAALS---

Query:  -------PAKLRGRP--PKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPET-TTAPPAPSG------RPRGRPPKVK
               P + RGRP  PKDP+ PP     Q KV +G+G+ RGRP K P+ ++ T A P P+       R RGRPPKVK
Subjt:  -------PAKLRGRP--PKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPET-TTAPPAPSG------RPRGRPPKVK

AT1G48620.1 high mobility group A52.4e-1338.07Show/hide
Query:  SLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNY-MKRDPTAPPRRGRG---RPPK------PKVPLP
        S PPY +MI  AI AL+   GS+K AIS+YIE  Y  +PT H +LLTHHL  +K SG LV  K +Y +   P  PP         PP+         PLP
Subjt:  SLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNY-MKRDPTAPPRRGRG---RPPK------PKVPLP

Query:  -PGAAALSPAKL---RGRPPKDPNAPPKPEPVQ----MKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPK
         P  A+ +P  +   RGRPPK      +P+P+         S    SR    +   P+    P  P  RP GRP K
Subjt:  -PGAAALSPAKL---RGRPPKDPNAPPKPEPVQ----MKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPK

AT3G18035.1 winged-helix DNA-binding transcription factor family protein2.4e-1335.05Show/hide
Query:  PPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPP--------RRGRGRP-PKPKV------
        PPY EMI  AI AL+   GS+K AIS+YIE  Y  L + H++LLTHHL  +K SG L   K +Y     + PP           +G   P+ ++      
Subjt:  PPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPP--------RRGRGRP-PKPKV------

Query:  -PLPPGAAALSPAKLRGRPPKDPNAPPKPEPVQMKVSSGTGKSRGR----------PRKFPQPETTTAPPAPSGRPR--GRPPKVKAPLTEASV
         P+  G+A+    + RGRPPK P    +P+P+Q    +   ++ G+          P   P P T +A   P GRPR  G      AP+ +ASV
Subjt:  -PLPPGAAALSPAKLRGRPPKDPNAPPKPEPVQMKVSSGTGKSRGR----------PRKFPQPETTTAPPAPSGRPR--GRPPKVKAPLTEASV

AT5G08780.1 winged-helix DNA-binding transcription factor family protein1.4e-0840Show/hide
Query:  LNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNN
        L++ P  P Y  MI+ AI  L+ + G+++ AIS++I+S Y NLP  H++LL+HHL+ +    E++   NN
Subjt:  LNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGAACTGCTCAATAAACCTCCATCACTCCCTCCTTACCCTGAGATGATATATAGGGCTATTGAAGCATTGAGTAGCGACAGTGGCTCAAACAAATCCGCAAT
TTCAAAGTACATTGAATCAACCTATGGAAACTTGCCAACTGGTCACTCATCTTTGCTCACACATCATTTGAGCATGATGAAAGCCAGTGGGGAACTTGTGTTCTGGAAGA
ACAACTACATGAAGAGGGACCCCACAGCGCCTCCCCGTCGAGGGCGTGGAAGGCCTCCAAAGCCAAAGGTGCCTCTGCCACCAGGTGCTGCTGCTCTGTCCCCAGCGAAG
TTGAGAGGGCGTCCACCTAAGGACCCCAATGCACCTCCAAAACCAGAGCCAGTGCAGATGAAGGTATCTTCTGGGACAGGGAAATCGAGAGGACGGCCAAGGAAATTTCC
TCAGCCAGAAACCACAACAGCTCCACCAGCACCGAGCGGGAGGCCGAGAGGTCGGCCTCCTAAGGTGAAGGCTCCATTGACTGAAGCTAGCGTATAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAACTCAAATTCCCTTTTTCGCAAATCTGTGCTCAAACTAAACAGTTTACAGGCAAATGTGTTCTTTGCAACAATCAAAGAACTTGAGGTTCCTTTCTCTATCTGT
AGCTGTTTTCTGGGTTTACTCTTCTCTTCTCTGTAGATTTCGCAGAATCAAAACCCTTTCTTTTTCAATTTTCAATGGCGACTGAACTGCTCAATAAACCTCCATCACTC
CCTCCTTACCCTGAGATGATATATAGGGCTATTGAAGCATTGAGTAGCGACAGTGGCTCAAACAAATCCGCAATTTCAAAGTACATTGAATCAACCTATGGAAACTTGCC
AACTGGTCACTCATCTTTGCTCACACATCATTTGAGCATGATGAAAGCCAGTGGGGAACTTGTGTTCTGGAAGAACAACTACATGAAGAGGGACCCCACAGCGCCTCCCC
GTCGAGGGCGTGGAAGGCCTCCAAAGCCAAAGGTGCCTCTGCCACCAGGTGCTGCTGCTCTGTCCCCAGCGAAGTTGAGAGGGCGTCCACCTAAGGACCCCAATGCACCT
CCAAAACCAGAGCCAGTGCAGATGAAGGTATCTTCTGGGACAGGGAAATCGAGAGGACGGCCAAGGAAATTTCCTCAGCCAGAAACCACAACAGCTCCACCAGCACCGAG
CGGGAGGCCGAGAGGTCGGCCTCCTAAGGTGAAGGCTCCATTGACTGAAGCTAGCGTATAGATTGTTGCAGTGCAGTGTTAATTGGTAGTGCCTTTGACTTTCTCTTCTC
TTATCTCTATCTCTCTCTGTTGCTGTGTTAGCAGTTGTAGTTGTATTGCTAGTTTTAGTTTGATGTGGGTGTGGGTGTAATTCTTGTAAAATTGTGGTGTAGTGGTTTGT
GAGGCTCTGTTGCTTTCTAATTTCAAAAAGTGAACATTGACCCTTGTGCTAATCATAATTTCTTTCTAAAGATCTTTCATGTCTTCAAA
Protein sequenceShow/hide protein sequence
MATELLNKPPSLPPYPEMIYRAIEALSSDSGSNKSAISKYIESTYGNLPTGHSSLLTHHLSMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPPGAAALSPAK
LRGRPPKDPNAPPKPEPVQMKVSSGTGKSRGRPRKFPQPETTTAPPAPSGRPRGRPPKVKAPLTEASV