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Sed0021996 (gene) of Chayote v1 genome

Gene IDSed0021996
OrganismSechium edule (Chayote v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG14:16137366..16138609
RNA-Seq ExpressionSed0021996
SyntenySed0021996
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW24414.1 hypothetical protein CK203_093199 [Vitis vinifera]3.8e-1238.81Show/hide
Query:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE
        + +PHE  +  EDW +LCD+F S EFK +S   S + S +  +H  G +SF     +  TE  + +G+IELF+  H+K   GW          KMLE+Q 
Subjt:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE

Query:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP
        +  A  +  MTEAEI   VLG +S  +KG G+ P
Subjt:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP

RVW51303.1 hypothetical protein CK203_075479 [Vitis vinifera]3.8e-1238.81Show/hide
Query:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE
        + +PHE  +  EDW +LCD+F S EFK +S   S + S +  +H  G +SF     +  TE  + +G+IELF+  H+K   GW          KMLE+Q 
Subjt:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE

Query:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP
        +  A  +  MTEAEI   VLG +S  +KG G+ P
Subjt:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP

RVW66347.1 hypothetical protein CK203_065231 [Vitis vinifera]3.8e-1238.81Show/hide
Query:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE
        + +PHE  +  EDW +LCD+F S EFK +S   S + S +  +H  G +SF     +  TE  + +G+IELF+  H+K   GW          KMLE+Q 
Subjt:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE

Query:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP
        +  A  +  MTEAEI   VLG +S  +KG G+ P
Subjt:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP

RVX04821.1 hypothetical protein CK203_024979 [Vitis vinifera]3.8e-1238.81Show/hide
Query:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE
        + +PHE  +  EDW +LCD+F S EFK +S   S + S +  +H  G +SF     +  TE  + +G+IELF+  H+K   GW          KMLE+Q 
Subjt:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE

Query:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP
        +  A  +  MTEAEI   VLG +S  +KG G+ P
Subjt:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP

XP_019080375.1 PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera]2.2e-1239.84Show/hide
Query:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---NKMLEMQEESTA-S
        + +PHE  +  EDW +LCD+F S EFK +S   S + S +  +H  G +SF     +  TE  + +G+IELF+  H+K   GW    KMLE+Q +  A  
Subjt:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---NKMLEMQEESTA-S

Query:  SHPMTEAEIRAHVLGTRSDSIKGEGWKP
        +  MTEA+I   VLG +S  +KG G+ P
Subjt:  SHPMTEAEIRAHVLGTRSDSIKGEGWKP

TrEMBL top hitse value%identityAlignment
A0A438CMH8 Uncharacterized protein1.8e-1238.81Show/hide
Query:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE
        + +PHE  +  EDW +LCD+F S EFK +S   S + S +  +H  G +SF     +  TE  + +G+IELF+  H+K   GW          KMLE+Q 
Subjt:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE

Query:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP
        +  A  +  MTEAEI   VLG +S  +KG G+ P
Subjt:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP

A0A438EUC9 Uncharacterized protein1.8e-1238.81Show/hide
Query:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE
        + +PHE  +  EDW +LCD+F S EFK +S   S + S +  +H  G +SF     +  TE  + +G+IELF+  H+K   GW          KMLE+Q 
Subjt:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE

Query:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP
        +  A  +  MTEAEI   VLG +S  +KG G+ P
Subjt:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP

A0A438G2C0 Uncharacterized protein1.8e-1238.81Show/hide
Query:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE
        + +PHE  +  EDW +LCD+F S EFK +S   S + S +  +H  G +SF     +  TE  + +G+IELF+  H+K   GW          KMLE+Q 
Subjt:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE

Query:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP
        +  A  +  MTEAEI   VLG +S  +KG G+ P
Subjt:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP

A0A438HRB4 Uncharacterized protein1.8e-1238.81Show/hide
Query:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE
        + +PHE  +  EDW +LCD+F S EFK +S   S + S +  +H  G +SF     +  TE  + +G+IELF+  H+K   GW          KMLE+Q 
Subjt:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE

Query:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP
        +  A  +  MTEAEI   VLG +S  +KG G+ P
Subjt:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP

A0A438J796 Uncharacterized protein1.8e-1238.81Show/hide
Query:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE
        + +PHE  +  EDW +LCD+F S EFK +S   S + S +  +H  G +SF     +  TE  + +G+IELF+  H+K   GW          KMLE+Q 
Subjt:  RNHPHERCTT-EDWLFLCDKFDSPEFKEKSRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGW---------NKMLEMQE

Query:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP
        +  A  +  MTEAEI   VLG +S  +KG G+ P
Subjt:  ESTA-SSHPMTEAEIRAHVLGTRSDSIKGEGWKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGACGACAAGGTAACGATGCTATGCGTATTTTTGAAGAACAAGTGAATGTGAATGCTATAGCACAAGCTCCTCCTGCTCCTCGTGCAGTTAAAAATTTAATTAA
AAGTTACTCAATTGGTAATGTAGCTGCTACGAATCATCGAACTAGAGGAATCTCAAGGAGTATTGAGTTGGAACGCATAGTTCGAATATATGGAAAGATTCAAATAGCAG
TACACCCAGAACATAAGAAACCTGTTAGAAATCATCCTCATGAGCGCTGCACTACCGAAGATTGGCTTTTCTTGTGTGACAAGTTTGATTCCCCTGAATTTAAGGAAAAA
TCTAGAAAAGCTAGTGAATCTCACAGCCATGTGCGGCACAATCATACAACTGGTGTAAAAAGCTTCACATACGTACTAGAGAAAAAAAAGACAGAAGGTCAGGATTATTT
GGGAGAGATTGAGTTGTTCCGTGAAACTCACTATAAAGAAGGAAAAGGATGGAATAAAATGTTGGAGATGCAAGAAGAGTCTACAGCAAGTTCCCATCCAATGACAGAAG
CTGAGATACGTGCACATGTTTTGGGCACTCGGTCTGATAGTATCAAAGGAGAAGGTTGGAAGCCACTATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGACGACAAGGTAACGATGCTATGCGTATTTTTGAAGAACAAGTGAATGTGAATGCTATAGCACAAGCTCCTCCTGCTCCTCGTGCAGTTAAAAATTTAATTAA
AAGTTACTCAATTGGTAATGTAGCTGCTACGAATCATCGAACTAGAGGAATCTCAAGGAGTATTGAGTTGGAACGCATAGTTCGAATATATGGAAAGATTCAAATAGCAG
TACACCCAGAACATAAGAAACCTGTTAGAAATCATCCTCATGAGCGCTGCACTACCGAAGATTGGCTTTTCTTGTGTGACAAGTTTGATTCCCCTGAATTTAAGGAAAAA
TCTAGAAAAGCTAGTGAATCTCACAGCCATGTGCGGCACAATCATACAACTGGTGTAAAAAGCTTCACATACGTACTAGAGAAAAAAAAGACAGAAGGTCAGGATTATTT
GGGAGAGATTGAGTTGTTCCGTGAAACTCACTATAAAGAAGGAAAAGGATGGAATAAAATGTTGGAGATGCAAGAAGAGTCTACAGCAAGTTCCCATCCAATGACAGAAG
CTGAGATACGTGCACATGTTTTGGGCACTCGGTCTGATAGTATCAAAGGAGAAGGTTGGAAGCCACTATCATAA
Protein sequenceShow/hide protein sequence
MDGRQGNDAMRIFEEQVNVNAIAQAPPAPRAVKNLIKSYSIGNVAATNHRTRGISRSIELERIVRIYGKIQIAVHPEHKKPVRNHPHERCTTEDWLFLCDKFDSPEFKEK
SRKASESHSHVRHNHTTGVKSFTYVLEKKKTEGQDYLGEIELFRETHYKEGKGWNKMLEMQEESTASSHPMTEAEIRAHVLGTRSDSIKGEGWKPLS