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Sed0022003 (gene) of Chayote v1 genome

Gene IDSed0022003
OrganismSechium edule (Chayote v1)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationLG09:9686132..9686650
RNA-Seq ExpressionSed0022003
SyntenySed0022003
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
POE15980.1 hypothetical protein BV923_23575 [Pectobacterium odoriferum]8.2e-2373.96Show/hide
Query:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFY---YKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN
        M LKYFL+LLLAVVL TTTQALK+PSDSNQEVIP++D++LPTTTTT  +P   DEESKFY   Y K+P Y K PPYKK PPYKK PPYKKYPPSS+
Subjt:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFY---YKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]8.2e-2373.96Show/hide
Query:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFY---YKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN
        M LKYFL+LLLAVVL TTTQALK+PSDSNQEVIP++D++LPTTTTT  +P   DEESKFY   Y K+P Y K PPYKK PPYKK PPYKKYPPSS+
Subjt:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFY---YKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]2.0e-1665.31Show/hide
Query:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSD---QKLPTTTTTEAEPASEDEESKFYYKKKPRYPKY--PPYKKRPPYKKRPPYKKYPPSSN
        M LKYFL+LLLAVVL TTTQALK+PS+SNQEVIP +D    KLPTT T        +EESKFY +  P    Y  PPYK+ PPYKKRPPYKKYPPSS+
Subjt:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSD---QKLPTTTTTEAEPASEDEESKFYYKKKPRYPKY--PPYKKRPPYKKRPPYKKYPPSSN

XP_022930415.1 uncharacterized protein LOC111436870 [Cucurbita moschata]3.9e-2577.42Show/hide
Query:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN
        M +KYFL+LLLAVVL TTTQALK+PSDS  EVIPVS+QKLP+TT T+ EPASE EESKFY  +K  Y KYPPYK+ PPYKKRPPYKKYPPSSN
Subjt:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN

XP_023513909.1 repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo]2.3e-2578.49Show/hide
Query:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN
        M +KYFL+LLLAVVL TTTQALK+PSDS  EVIPVS+QKLP+TT T+ EPASE EESKF Y+K+P Y KYPPYK+ PPYKKRPPYKKYPPSSN
Subjt:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein9.5e-1765.31Show/hide
Query:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSD---QKLPTTTTTEAEPASEDEESKFYYKKKPRYPKY--PPYKKRPPYKKRPPYKKYPPSSN
        M LKYFL+LLLAVVL TTTQALK+PS+SNQEVIP +D    KLPTT T        +EESKFY +  P    Y  PPYK+ PPYKKRPPYKKYPPSS+
Subjt:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSD---QKLPTTTTTEAEPASEDEESKFYYKKKPRYPKY--PPYKKRPPYKKRPPYKKYPPSSN

A0A0A0LNP2 Uncharacterized protein2.6e-1463.16Show/hide
Query:  KYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSD---QKLPTTTTTEAEPASEDEESKFYYKKKPRYPKY--PPYKKRPPYKKRPPYKKYPPSSN
        KYFL+LLLAVVL TTTQALK+P +SNQE IP +D    KLPTT T        +EESKF+ +  P    Y  PPYKK PPYKKRPPYKKYPPSS+
Subjt:  KYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSD---QKLPTTTTTEAEPASEDEESKFYYKKKPRYPKY--PPYKKRPPYKKRPPYKKYPPSSN

A0A1S3CE34 repetitive proline-rich cell wall protein 3-like1.8e-1564.21Show/hide
Query:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKY--PPYKKRPPYKKRPPYKKYPPSSN
        M LKYFL+LLLA VL +TTQALK+PS S+QEVIP +D    T  TT A+P   +EESKFY +  P    Y  PPYKK PPYKKRPPYKKYPPSS+
Subjt:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKY--PPYKKRPPYKKRPPYKKYPPSSN

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like1.8e-1564.21Show/hide
Query:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKY--PPYKKRPPYKKRPPYKKYPPSSN
        M LKYFL+LLLA VL +TTQALK+PS S+QEVIP +D    T  TT A+P   +EESKFY +  P    Y  PPYKK PPYKKRPPYKKYPPSS+
Subjt:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKY--PPYKKRPPYKKRPPYKKYPPSSN

A0A6J1EWV3 uncharacterized protein LOC1114368701.9e-2577.42Show/hide
Query:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN
        M +KYFL+LLLAVVL TTTQALK+PSDS  EVIPVS+QKLP+TT T+ EPASE EESKFY  +K  Y KYPPYK+ PPYKKRPPYKKYPPSSN
Subjt:  MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTGAAATACTTTCTTGTTCTTCTTCTCGCAGTGGTCCTTTTTACCACAACTCAAGCTCTAAAAAATCCGTCGGACTCCAACCAGGAAGTGATTCCGGTTAGCGA
CCAAAAGCTACCGACCACGACCACGACCGAGGCCGAGCCTGCGTCGGAAGACGAGGAATCCAAGTTCTACTACAAGAAGAAACCTCGCTACCCGAAGTACCCACCCTACA
AGAAACGTCCCCCATACAAGAAACGTCCTCCATACAAGAAGTACCCACCATCCTCCAACTGA
mRNA sequenceShow/hide mRNA sequence
CAGGCAACCTAACACCAAAAAGCCACAATGTCTCTGAAATACTTTCTTGTTCTTCTTCTCGCAGTGGTCCTTTTTACCACAACTCAAGCTCTAAAAAATCCGTCGGACTC
CAACCAGGAAGTGATTCCGGTTAGCGACCAAAAGCTACCGACCACGACCACGACCGAGGCCGAGCCTGCGTCGGAAGACGAGGAATCCAAGTTCTACTACAAGAAGAAAC
CTCGCTACCCGAAGTACCCACCCTACAAGAAACGTCCCCCATACAAGAAACGTCCTCCATACAAGAAGTACCCACCATCCTCCAACTGAATGTTGCCCAACTGAAGTGTT
TAATACATAAATAAGCACCGCTACAACTGTGGTGCCCCAAGCTTAGGATATAATATTAATTCATGTTCATGTTGGCTTTTGATTTCTGTAATATGTTAACAACTTGGCAT
GTGCCATAGGGGTGTATTATCTTTGCATTATGCTTCACTTAATCTAAGTTTGTATCGTATAATATTTTGTTTTTGTTCC
Protein sequenceShow/hide protein sequence
MSLKYFLVLLLAVVLFTTTQALKNPSDSNQEVIPVSDQKLPTTTTTEAEPASEDEESKFYYKKKPRYPKYPPYKKRPPYKKRPPYKKYPPSSN