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Sed0022020 (gene) of Chayote v1 genome

Gene IDSed0022020
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:37572566..37573204
RNA-Seq ExpressionSed0022020
SyntenySed0022020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031272.1 hypothetical protein E6C27_scaffold139G00250 [Cucumis melo var. makuwa]5.1e-1266.07Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP
        MGI+R E C ELL  AI+FVV VAESVG VIH+E QP   PTA  R+P+PF+GFYP
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP
KAB2042822.1 hypothetical protein ES319_D02G244200v1 [Gossypium barbadense]7.9e-0545.61Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANS-RIPIPFIGFYP
        M ++R E C EL+  A+ FVV VAE+VG+VIH+   PP    + S   P+P +GF P
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANS-RIPIPFIGFYP
KAG4209325.1 hypothetical protein ERO13_A03G190700v2 [Gossypium hirsutum]6.7e-0443.86Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANS-RIPIPFIGFYP
        M ++R E C EL+  A+ FVV VAE+VG+VIH+   PP    + S    +P +GF P
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANS-RIPIPFIGFYP
KJB32405.1 hypothetical protein B456_005G239600 [Gossypium raimondii]1.8e-0443.86Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANS-RIPIPFIGFYP
        M +++ E C EL+  A+ FVV VAE+VG+VIH+   PP    + S   P+P +GF P
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANS-RIPIPFIGFYP
XP_015874275.1 uncharacterized protein LOC107411246 [Ziziphus jujuba]4.2e-0651.79Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP
        M I+R E C ELL  AI FV+ VAE+VG+VIH+   P    ++    P+PFIGFYP
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP
TrEMBL top hitse value%identityAlignment
A0A0A0K3A1 Uncharacterized protein2.5e-1266.07Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP
        MGI+R E C ELL  AI+FVV VAESVG VIH+E QP   PTA  R+P+PF+GFYP
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP
A0A5D2M247 Uncharacterized protein3.8e-0545.61Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANS-RIPIPFIGFYP
        M ++R E C EL+  A+ FVV VAE+VG+VIH+   PP    + S   P+P +GF P
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANS-RIPIPFIGFYP
A0A5D3C626 Uncharacterized protein2.5e-1266.07Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP
        MGI+R E C ELL  AI+FVV VAESVG VIH+E QP   PTA  R+P+PF+GFYP
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP
A0A5J5SGN3 Uncharacterized protein3.8e-0545.61Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANS-RIPIPFIGFYP
        M ++R E C EL+  A+ FVV VAE+VG+VIH+   PP    + S   P+P +GF P
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANS-RIPIPFIGFYP
A0A6P3ZHL2 uncharacterized protein LOC1074112462.0e-0651.79Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP
        M I+R E C ELL  AI FV+ VAE+VG+VIH+   P    ++    P+PFIGFYP
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33960.1 unknown protein7.1e-0437.93Show/hide
Query:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVI--HKEFQPPQRPTANSRIPIPFIGFYP
        M IKR E C EL+   + FVV VAE+V +V+  H   + P  P    +  +P+   YP
Subjt:  MGIKRFEFCSELLNTAIHFVVAVAESVGLVI--HKEFQPPQRPTANSRIPIPFIGFYP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTAAGAGATTTGAATTCTGCTCGGAGCTCCTGAATACGGCCATCCATTTCGTTGTCGCCGTCGCGGAATCCGTCGGCCTCGTCATCCACAAGGAATTTCAGCC
GCCGCAACGGCCGACAGCCAACTCTCGTATTCCGATTCCGTTCATCGGCTTTTACCCCTAA
mRNA sequenceShow/hide mRNA sequence
GAAGAAACAAAGCAGTGTTTCCAAAGTTCCGAATCGCCTAAAACGAATCGTCGATTCTTGGTGTTCTTCGATCCGGCGGAAATGGGGATTAAGAGATTTGAATTCTGCTC
GGAGCTCCTGAATACGGCCATCCATTTCGTTGTCGCCGTCGCGGAATCCGTCGGCCTCGTCATCCACAAGGAATTTCAGCCGCCGCAACGGCCGACAGCCAACTCTCGTA
TTCCGATTCCGTTCATCGGCTTTTACCCCTAAATCCACCCTCCGCCGCCGAGATGGGGCCATATTCCTTCCACGTTAGCCTAAATTTTGTTTTTTTTAATTCAATCGAGT
TTTGTATTTTTTTTCTTTTTGGAAATAATTAATTTCATTTTATTGGATCCTAATATGCCTTTTAAGGTTATCTCTTTTTGGGCTCTATCTCTATTTCATTTTTATTAGAT
GGAATATTTATTCATCTTAAAGTTATTTCATTTTTATTAGAATGAATAGTTATTTACGAAAGCAATAATTTACATTTGTTGTATATTAGTATGAGGTATCCAACATTTGC
CGACGTGTGACACTTGCAAAGAGCTCATGCCCATCAATTTATTTATTTGAAACCACACAATTCATTAGAATCCCTGAAGACCCAAACAA
Protein sequenceShow/hide protein sequence
MGIKRFEFCSELLNTAIHFVVAVAESVGLVIHKEFQPPQRPTANSRIPIPFIGFYP