CuGenDBv2

Gene ID	Sed0022044
Organism	Sechium edule (Chayote v1)
Description	T3P18.3
Genome location	LG13:9828801..9830762
RNA-Seq Expression	Sed0022044
Synteny	Sed0022044
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]

9.2e-59

47.72

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Query:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ
        ++  FSNPPLNQ+LNQ+ ++KLDR N+LLWK LA+PILK YKLEGHL                              G   +   R+VN L+E WVT D 
Subjt:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ

Query:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRK----------------DNLGQTGSKISDRALISQVLLGLDEEYNP
        L+LGWLYNSMT +VA Q+MG+   +DLWDA Q  FG+ SRAEED+LRQ+ QTTRK                DNLGQ GS +  RALISQVLLGLDE YN 
Subjt:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRK----------------DNLGQTGSKISDRALISQVLLGLDEEYNP

Query:  VVATIQGKPDMRWIDLQNELLLFEKRLDHQNTQRMSV---NFNHNTVVNMANKSTNNA---NNSKPLYDTH----SGGRHNFNQG
        V+  IQGKPD+ W+D+Q++LL+FEK L HQNTQ+      N   +  +NMA +   N    +++K  Y  +    SG R N N G
Subjt:  VVATIQGKPDMRWIDLQNELLLFEKRLDHQNTQRMSV---NFNHNTVVNMANKSTNNA---NNSKPLYDTH----SGGRHNFNQG

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]

4.1e-51

45.11

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Query:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ
        ++  FSNPPLNQ+LNQ+ ++KLDR N+LLWK LA+PILK YKLEGHL                              G   +   R+VNPL+E WVT D 
Subjt:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ

Query:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL
        L+LGWLYNSMT +VA Q+MG+   +DLWDA Q  FG+ SRAEED+LRQ+ QTTRK                     GLDE YN V+  IQGKPD+ W+D+
Subjt:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL

Query:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN
        Q++LL+FEKRL HQNTQ+ +  N   +  +NMA +   N   ++     +   R +F+ G RG  N
Subjt:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]

4.1e-51

45.11

Show/hide

Query:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ
        ++  FSNPPLNQ+LNQ+ ++KLDR N+LLWK LA+PILK YKLEGHL                              G   +   R+VNPL+E WVT D 
Subjt:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ

Query:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL
        L+LGWLYNSMT +VA Q+MG+   +DLWDA Q  FG+ SRAEED+LRQ+ QTTRK                     GLDE YN V+  IQGKPD+ W+D+
Subjt:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL

Query:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN
        Q++LL+FEKRL HQNTQ+ +  N   +  +NMA +   N   ++     +   R +F+ G RG  N
Subjt:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]

4.1e-51

45.11

Show/hide

Query:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ
        ++  FSNPPLNQ+LNQ+ ++KLDR N+LLWK LA+PILK YKLEGHL                              G   +   R+VNPL+E WVT D 
Subjt:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ

Query:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL
        L+LGWLYNSMT +VA Q+MG+   +DLWDA Q  FG+ SRAEED+LRQ+ QTTRK                     GLDE YN V+  IQGKPD+ W+D+
Subjt:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL

Query:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN
        Q++LL+FEKRL HQNTQ+ +  N   +  +NMA +   N   ++     +   R +F+ G RG  N
Subjt:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]

3.0e-57

46.6

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Query:  FSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHLFGTKIATPTRVV--------------------NPLYESWVTIDQLVLGWLYNSMTQE
        F++PPLNQLLNQI SIK+DRGNFLLW+NLA+PIL+SYKL  +L G K   PT +V                    NP YE+W+ +D+L+LGWLYNSM  +
Subjt:  FSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHLFGTKIATPTRVV--------------------NPLYESWVTIDQLVLGWLYNSMTQE

Query:  VATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRK----------------DNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRW
        VA QVMG+ TS++LW AVQ LFG+ SRAE DYL+Q+FQ T K                DNL   GS +S R L+SQVL GLDEEYNP+V  +QGK ++ W
Subjt:  VATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRK----------------DNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRW

Query:  IDLQNELLLFEKRLDHQNTQRMSVNFNHNTVVNM---------ANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGNQHQRGRGRGRGYNNYSN
         ++  ELL +EKRL++QN+ +  +  N     ++          N+ TNN NNS    +TH GG   + +GS G     QR RGRG     + N
Subjt:  IDLQNELLLFEKRLDHQNTQRMSVNFNHNTVVNM---------ANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGNQHQRGRGRGRGYNNYSN

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X1

2.0e-51

45.11

Show/hide

Query:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ
        ++  FSNPPLNQ+LNQ+ ++KLDR N+LLWK LA+PILK YKLEGHL                              G   +   R+VNPL+E WVT D 
Subjt:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ

Query:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL
        L+LGWLYNSMT +VA Q+MG+   +DLWDA Q  FG+ SRAEED+LRQ+ QTTRK                     GLDE YN V+  IQGKPD+ W+D+
Subjt:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL

Query:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN
        Q++LL+FEKRL HQNTQ+ +  N   +  +NMA +   N   ++     +   R +F+ G RG  N
Subjt:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X4

2.0e-51

45.11

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Query:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ
        ++  FSNPPLNQ+LNQ+ ++KLDR N+LLWK LA+PILK YKLEGHL                              G   +   R+VNPL+E WVT D 
Subjt:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ

Query:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL
        L+LGWLYNSMT +VA Q+MG+   +DLWDA Q  FG+ SRAEED+LRQ+ QTTRK                     GLDE YN V+  IQGKPD+ W+D+
Subjt:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL

Query:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN
        Q++LL+FEKRL HQNTQ+ +  N   +  +NMA +   N   ++     +   R +F+ G RG  N
Subjt:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X3

2.0e-51

45.11

Show/hide

Query:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ
        ++  FSNPPLNQ+LNQ+ ++KLDR N+LLWK LA+PILK YKLEGHL                              G   +   R+VNPL+E WVT D 
Subjt:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ

Query:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL
        L+LGWLYNSMT +VA Q+MG+   +DLWDA Q  FG+ SRAEED+LRQ+ QTTRK                     GLDE YN V+  IQGKPD+ W+D+
Subjt:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDL

Query:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN
        Q++LL+FEKRL HQNTQ+ +  N   +  +NMA +   N   ++     +   R +F+ G RG  N
Subjt:  QNELLLFEKRLDHQNTQRMSV-NFNHNTVVNMANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGN

A0A5A7SIT7 Uncharacterized protein

4.4e-59

47.72

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Query:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ
        ++  FSNPPLNQ+LNQ+ ++KLDR N+LLWK LA+PILK YKLEGHL                              G   +   R+VN L+E WVT D 
Subjt:  NTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHL-----------------------------FGTKIATPTRVVNPLYESWVTIDQ

Query:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRK----------------DNLGQTGSKISDRALISQVLLGLDEEYNP
        L+LGWLYNSMT +VA Q+MG+   +DLWDA Q  FG+ SRAEED+LRQ+ QTTRK                DNLGQ GS +  RALISQVLLGLDE YN 
Subjt:  LVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRK----------------DNLGQTGSKISDRALISQVLLGLDEEYNP

Query:  VVATIQGKPDMRWIDLQNELLLFEKRLDHQNTQRMSV---NFNHNTVVNMANKSTNNA---NNSKPLYDTH----SGGRHNFNQG
        V+  IQGKPD+ W+D+Q++LL+FEK L HQNTQ+      N   +  +NMA +   N    +++K  Y  +    SG R N N G
Subjt:  VVATIQGKPDMRWIDLQNELLLFEKRLDHQNTQRMSV---NFNHNTVVNMANKSTNNA---NNSKPLYDTH----SGGRHNFNQG

A0A6J1DCW4 uncharacterized protein LOC111019598

1.4e-57

46.6

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Query:  FSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHLFGTKIATPTRVV--------------------NPLYESWVTIDQLVLGWLYNSMTQE
        F++PPLNQLLNQI SIK+DRGNFLLW+NLA+PIL+SYKL  +L G K   PT +V                    NP YE+W+ +D+L+LGWLYNSM  +
Subjt:  FSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHLFGTKIATPTRVV--------------------NPLYESWVTIDQLVLGWLYNSMTQE

Query:  VATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRK----------------DNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRW
        VA QVMG+ TS++LW AVQ LFG+ SRAE DYL+Q+FQ T K                DNL   GS +S R L+SQVL GLDEEYNP+V  +QGK ++ W
Subjt:  VATQVMGYETSKDLWDAVQTLFGIHSRAEEDYLRQLFQTTRK----------------DNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRW

Query:  IDLQNELLLFEKRLDHQNTQRMSVNFNHNTVVNM---------ANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGNQHQRGRGRGRGYNNYSN
         ++  ELL +EKRL++QN+ +  +  N     ++          N+ TNN NNS    +TH GG   + +GS G     QR RGRG     + N
Subjt:  IDLQNELLLFEKRLDHQNTQRMSVNFNHNTVVNM---------ANKSTNNANNSKPLYDTHSGGRHNFNQGSRGGGNQHQRGRGRGRGYNNYSN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

1.5e-06

31.11

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Query:  IMSIKLDRGNFLLWKNLAMPILKSYKLEGHLFGTKIATPTRVVNPLYESWVTIDQLVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLF
        I  +  D  N++ WK      L+  K  G + GT +  P    +PLY+ W   + +V+ WL NSMT ++   VM  ET+  +W+ ++ +F
Subjt:  IMSIKLDRGNFLLWKNLAMPILKSYKLEGHLFGTKIATPTRVVNPLYESWVTIDQLVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCTCAAACACCACAAATTTTAGCAACCCTCCTCTTAATCAACTTCTCAATCAAATAATGTCAATCAAGTTGGATAGAGGAAATTTTCTCCTATGGAAAAACTTGGC
CATGCCCATTTTGAAAAGCTACAAATTAGAAGGTCATTTATTTGGAACAAAAATTGCAACACCTACTAGAGTGGTGAATCCTCTTTACGAGTCATGGGTCACCATTGATC
AATTGGTACTTGGGTGGTTATACAACTCAATGACACAAGAGGTGGCTACACAAGTCATGGGGTATGAAACCTCCAAGGATTTATGGGATGCTGTCCAAACCTTGTTTGGA
ATCCACTCAAGAGCAGAAGAAGACTATCTACGTCAACTCTTTCAAACGACGAGAAAAGACAATCTTGGCCAGACTGGAAGCAAAATCTCAGATCGAGCATTGATCTCCCA
AGTTCTCTTGGGACTTGACGAGGAATACAATCCCGTAGTAGCCACGATACAAGGAAAACCTGATATGCGTTGGATCGACTTGCAAAATGAACTTCTTCTCTTCGAAAAGA
GGTTGGATCATCAAAACACTCAGAGAATGAGTGTCAATTTCAACCACAACACAGTGGTCAATATGGCAAACAAATCCACCAACAATGCCAATAACTCAAAGCCTCTATAT
GATACACACAGTGGAGGTCGACACAACTTTAACCAAGGTTCTCGAGGGGGAGGGAACCAACATCAAAGAGGCCGAGGTCGAGGACGTGGCTACAATAATTACTCTAATAA
TTTAAAATTTGCAAGATGGTGTTTGGATTCTAAGTAA

mRNA sequence

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Protein sequence

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MASNTTNFSNPPLNQLLNQIMSIKLDRGNFLLWKNLAMPILKSYKLEGHLFGTKIATPTRVVNPLYESWVTIDQLVLGWLYNSMTQEVATQVMGYETSKDLWDAVQTLFG
IHSRAEEDYLRQLFQTTRKDNLGQTGSKISDRALISQVLLGLDEEYNPVVATIQGKPDMRWIDLQNELLLFEKRLDHQNTQRMSVNFNHNTVVNMANKSTNNANNSKPLY
DTHSGGRHNFNQGSRGGGNQHQRGRGRGRGYNNYSNNLKFARWCLDSK

Sed0022044 (gene) of Chayote v1 genome