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Sed0022046 (gene) of Chayote v1 genome

Gene IDSed0022046
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:2824516..2825015
RNA-Seq ExpressionSed0022046
SyntenySed0022046
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588556.1 hypothetical protein SDJN03_17121, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3888.37Show/hide
Query:  GGNRQKKSHSSFSFFGLFKSKKTRKGDHYDHDEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS
        GGN+ KKSHSSFSFFG FKSK+ RKG+HY+HDE++CPRKVWPSDADKCH WVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS
Subjt:  GGNRQKKSHSSFSFFGLFKSKKTRKGDHYDHDEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS

KAG6590516.1 hypothetical protein SDJN03_15939, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2772.22Show/hide
Query:  GGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS
        GGNR KK+ SSFSF   FKSK++RKGD YDH    D+++ P KVWPSDADK HHWVAEPGIDRKA DYI RIH +RVLET+ QTVTVAPS
Subjt:  GGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS

KGN45869.1 hypothetical protein Csa_005516 [Cucumis sativus]1.4e-2767.74Show/hide
Query:  MAGGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS
        M G NRQKK+H+SFS F  FKS++ RKGDH +H     DE+    KVWPSD DK HHWVAEPGIDRKAKDYIDRI+RNRV E+ERQTVT++P+
Subjt:  MAGGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS

KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]1.7e-3073.63Show/hide
Query:  GGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS
        GGNRQKKSHSSFS F  FKSK+ RKGDHYDH     DE+    KVWPSD DK HHW+AEPGIDRKAKDYIDRI+RNRV E+ERQTVT++P+
Subjt:  GGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS

KGN65989.1 hypothetical protein Csa_006868 [Cucumis sativus]1.1e-2975.79Show/hide
Query:  GGNRQKKSH-SSFSFFGLFKSKKT-RKGDH-YDH-------DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAP
        GGNRQKKSH SSFSF GLFKSK++ RKGDH YDH       ++ +CP KVWPSDADKCH WVAEPGIDRKAKDYIDRIHRNRV ET RQTVT+ P
Subjt:  GGNRQKKSH-SSFSFFGLFKSKKT-RKGDH-YDH-------DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAP

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein8.3e-3173.63Show/hide
Query:  GGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS
        GGNRQKKSHSSFS F  FKSK+ RKGDHYDH     DE+    KVWPSD DK HHW+AEPGIDRKAKDYIDRI+RNRV E+ERQTVT++P+
Subjt:  GGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS

A0A0A0KAK6 Uncharacterized protein6.6e-2867.74Show/hide
Query:  MAGGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS
        M G NRQKK+H+SFS F  FKS++ RKGDH +H     DE+    KVWPSD DK HHWVAEPGIDRKAKDYIDRI+RNRV E+ERQTVT++P+
Subjt:  MAGGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS

A0A0A0KBW1 Uncharacterized protein1.4e-3073.63Show/hide
Query:  GGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS
        GGNRQKKSHSSFS F  FKS++ RKGDHYDH     DE+    KVWPSD DK HHWVAEPGIDRKAKDYIDRI+RNRV E+ERQTVT++P+
Subjt:  GGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS

A0A0A0LY99 Uncharacterized protein5.4e-3075.79Show/hide
Query:  GGNRQKKSH-SSFSFFGLFKSKKT-RKGDH-YDH-------DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAP
        GGNRQKKSH SSFSF GLFKSK++ RKGDH YDH       ++ +CP KVWPSDADKCH WVAEPGIDRKAKDYIDRIHRNRV ET RQTVT+ P
Subjt:  GGNRQKKSH-SSFSFFGLFKSKKT-RKGDH-YDH-------DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAP

A0A5A7SWT9 Uncharacterized protein1.1e-2767.74Show/hide
Query:  MAGGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS
        M G NRQKKSHSSFS F  FKS++ RKGD+ +H     DE+    KVWPSD DK HHWVAEPGIDRKAKDYIDRI+RNRV E+ERQT+T++P+
Subjt:  MAGGNRQKKSHSSFSFFGLFKSKKTRKGDHYDH-----DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48325.1 Expressed protein3.5e-0531.25Show/hide
Query:  MAGGNRQKKSHSSFSFFGLFKSKKTRKGDHYDHDEITCPR-KVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETE
        M G  R++KS SSFS      ++ +++ D+++ + +   R ++  +D D C   +AEP IDR+A  +I + H   + +TE
Subjt:  MAGGNRQKKSHSSFSFFGLFKSKKTRKGDHYDHDEITCPR-KVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETE

AT3G05858.1 unknown protein2.1e-1042.17Show/hide
Query:  GGNRQKKSHSSFSFFGLFKSKKTRKGD-HYDHDEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVT
        GG  +  S   FS F  FK++++ + +     D+    RK   SD DK  +WVAEPGIDRKA  +I + H  RV E+ERQT++
Subjt:  GGNRQKKSHSSFSFFGLFKSKKTRKGD-HYDHDEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVT

AT5G26620.1 unknown protein8.0e-1056Show/hide
Query:  DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTV
        D++   RK W SD DK  +WVAEPGIDRKA  +I + H +RV E+ERQT+
Subjt:  DEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAGGTAACAGGCAGAAAAAATCTCACTCTTCCTTCTCGTTCTTTGGCTTATTCAAATCAAAGAAGACAAGAAAAGGAGACCATTATGACCACGACGAGATCAC
GTGCCCTAGAAAGGTATGGCCAAGCGATGCAGACAAGTGCCACCATTGGGTTGCCGAGCCTGGCATCGACAGAAAAGCCAAAGATTATATCGACAGGATCCATCGCAACC
GTGTACTAGAAACCGAACGTCAAACTGTTACCGTTGCGCCTTCGTGA
mRNA sequenceShow/hide mRNA sequence
CATAGTTTTCCATTCATTTCCCATTTGAAAAAAAAAAAACCTCACTCTCTTTACTACTTTTCTTCACTACAATAATTTCGAATTTTCCCGACGCCAAAAGGAAAGCATGG
CCGGAGGTAACAGGCAGAAAAAATCTCACTCTTCCTTCTCGTTCTTTGGCTTATTCAAATCAAAGAAGACAAGAAAAGGAGACCATTATGACCACGACGAGATCACGTGC
CCTAGAAAGGTATGGCCAAGCGATGCAGACAAGTGCCACCATTGGGTTGCCGAGCCTGGCATCGACAGAAAAGCCAAAGATTATATCGACAGGATCCATCGCAACCGTGT
ACTAGAAACCGAACGTCAAACTGTTACCGTTGCGCCTTCGTGAGCTAGGACATTCATGTAAATTACCATGAATCAATATATCTCTTTGTTTATTGCTGAATCTCTCCCTA
CTCTTCTTCCTTTTTGTAATTCATTCCAAGCTCATCAAATAATATACATATATTTCGCTC
Protein sequenceShow/hide protein sequence
MAGGNRQKKSHSSFSFFGLFKSKKTRKGDHYDHDEITCPRKVWPSDADKCHHWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPS