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Sed0022049 (gene) of Chayote v1 genome

Gene IDSed0022049
OrganismSechium edule (Chayote v1)
Descriptionycf49-like protein
Genome locationLG04:5991109..5997375
RNA-Seq ExpressionSed0022049
SyntenySed0022049
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019634 - Uncharacterised protein family Ycf49


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147956.1 uncharacterized protein LOC101205605 [Cucumis sativus]3.5e-6780.61Show/hide
Query:  PKFPISSSSSLSQSVAGIRFPSITGAKTLVGLIGTGFTLALLGPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESW
        P F + +  S  + ++ + FPS    KT+V L+GTGFTLALLGPE ASAATEL SSL FNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG+KSGNESW
Subjt:  PKFPISSSSSLSQSVAGIRFPSITGAKTLVGLIGTGFTLALLGPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESW

Query:  KGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL
        KGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVA+QA+LTA+GNATMCIAAFRIYKSSQ+RS NL
Subjt:  KGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL

XP_022944188.1 uncharacterized protein LOC111448709 [Cucurbita moschata]1.8e-6674.51Show/hide
Query:  MSLTVT-SPLLPNPKFPISSSSS-------------LSQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPEPA---SAATEL----LSSLQFNE
        MSLT T      NPK PISSSSS              SQ++  IRFP I GA      KT+V LIGTG TLALLGPE A   +AATEL     SSLQFNE
Subjt:  MSLTVT-SPLLPNPKFPISSSSS-------------LSQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPEPA---SAATEL----LSSLQFNE

Query:  PQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQR
        PQNALSLPTWAIHVSSVVEWITAMALVWQYG+KSG+ESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK+SQ+R
Subjt:  PQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQR

Query:  SSNL
        SS L
Subjt:  SSNL

XP_023005556.1 uncharacterized protein LOC111498507 [Cucurbita maxima]1.1e-6875.74Show/hide
Query:  LTVTSPLL---PNPKFPISSSSS------------LSQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPE--PASAATEL----LSSLQFNEPQ
        +++TS LL    NPK PISSSSS             SQ++ GIRFP I GA      KT+V LIGTG TLALLGPE   A+AATEL     SSLQFNEPQ
Subjt:  LTVTSPLL---PNPKFPISSSSS------------LSQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPE--PASAATEL----LSSLQFNEPQ

Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSS
        NALSLPTWAIHVSSVVEWITAMALVWQYG+KSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK+SQ+RSS
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSS

Query:  NL
         L
Subjt:  NL

XP_023539827.1 uncharacterized protein LOC111800391 [Cucurbita pepo subsp. pepo]1.6e-6775.37Show/hide
Query:  MSLTVT-SPLLPNPKFPISSSSS------------LSQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPEPA---SAATEL----LSSLQFNEP
        MSLT T      NPK PISSSSS             SQ++ GIRFP   GA      KT+V LIGTG TLALLGPE A   +AATEL     SSLQFNEP
Subjt:  MSLTVT-SPLLPNPKFPISSSSS------------LSQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPEPA---SAATEL----LSSLQFNEP

Query:  QNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRS
        QNALSLPTWAIHVSSVVEWITAMALVWQYG+KSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK+SQ+RS
Subjt:  QNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRS

Query:  SNL
        S L
Subjt:  SNL

XP_038876845.1 ycf49-like protein [Benincasa hispida]7.9e-6780.23Show/hide
Query:  PKFPISSSSSL--SQSVAGIRFPSIT-----GAKTLVGLIGTGFTLALLGPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGD
        PK P SSSSSL  S+  AGI F         G+KT++  +GTGFTLALLGPE ASAAT+L SSL FNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG+
Subjt:  PKFPISSSSSL--SQSVAGIRFPSIT-----GAKTLVGLIGTGFTLALLGPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGD

Query:  KSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL
        KSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVA+QA+LTA+GNATMCIAAFRIYKSSQ+ S NL
Subjt:  KSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL

TrEMBL top hitse value%identityAlignment
A0A0A0L4G0 Uncharacterized protein1.7e-6780.61Show/hide
Query:  PKFPISSSSSLSQSVAGIRFPSITGAKTLVGLIGTGFTLALLGPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESW
        P F + +  S  + ++ + FPS    KT+V L+GTGFTLALLGPE ASAATEL SSL FNEPQNALSLPTWAIHVSSVVEWITAMALVWQYG+KSGNESW
Subjt:  PKFPISSSSSLSQSVAGIRFPSITGAKTLVGLIGTGFTLALLGPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESW

Query:  KGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL
        KGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVA+QA+LTA+GNATMCIAAFRIYKSSQ+RS NL
Subjt:  KGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL

A0A1S3BLS2 ycf49-like protein1.9e-6673.16Show/hide
Query:  LTVTSPLL-----PNPKFPIS----------SSSSLSQSVAGIRFPSITGAKTLVGLIGTGFTLALLGPEPASAATELLSSLQFNEPQNALSLPTWAIHV
        +++TSPLL     P    PIS          +  S  + ++ + FPS    K +V L+GTGFTLALLGPE ASAATEL SSL FNEPQNALSLPTWAIHV
Subjt:  LTVTSPLL-----PNPKFPIS----------SSSSLSQSVAGIRFPSITGAKTLVGLIGTGFTLALLGPEPASAATELLSSLQFNEPQNALSLPTWAIHV

Query:  SSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL
        SSVVEWITAMALVWQYG+KSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVA+QA+LTA+GNATMCIAAFRIYKSSQ+RS NL
Subjt:  SSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL

A0A6J1DH09 uncharacterized protein LOC1110204153.2e-6674.87Show/hide
Query:  LTVTSPLL---PNPKFPISSSSSL-----------SQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPEPASAATEL----LSSLQFNEPQNAL
        + +TS LL    NPK PISSSSS            S+   GIRF  I GA      K++V L+GTGFTLALLGPE ASAA EL     SSLQFNEPQNAL
Subjt:  LTVTSPLL---PNPKFPISSSSSL-----------SQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPEPASAATEL----LSSLQFNEPQNAL

Query:  SLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL
        SLPTWAIHVSSVVEWITAMALVWQYG+KSGNE+WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK SQ+RS NL
Subjt:  SLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL

A0A6J1FXT1 uncharacterized protein LOC1114487098.5e-6774.51Show/hide
Query:  MSLTVT-SPLLPNPKFPISSSSS-------------LSQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPEPA---SAATEL----LSSLQFNE
        MSLT T      NPK PISSSSS              SQ++  IRFP I GA      KT+V LIGTG TLALLGPE A   +AATEL     SSLQFNE
Subjt:  MSLTVT-SPLLPNPKFPISSSSS-------------LSQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPEPA---SAATEL----LSSLQFNE

Query:  PQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQR
        PQNALSLPTWAIHVSSVVEWITAMALVWQYG+KSG+ESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK+SQ+R
Subjt:  PQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQR

Query:  SSNL
        SS L
Subjt:  SSNL

A0A6J1KVA7 uncharacterized protein LOC1114985075.3e-6975.74Show/hide
Query:  LTVTSPLL---PNPKFPISSSSS------------LSQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPE--PASAATEL----LSSLQFNEPQ
        +++TS LL    NPK PISSSSS             SQ++ GIRFP I GA      KT+V LIGTG TLALLGPE   A+AATEL     SSLQFNEPQ
Subjt:  LTVTSPLL---PNPKFPISSSSS------------LSQSVAGIRFPSITGA------KTLVGLIGTGFTLALLGPE--PASAATEL----LSSLQFNEPQ

Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSS
        NALSLPTWAIHVSSVVEWITAMALVWQYG+KSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYK+SQ+RSS
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSS

Query:  NL
         L
Subjt:  NL

SwissProt top hitse value%identityAlignment
P15811 Uncharacterized protein ycf491.1e-0734.65Show/hide
Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSS
        N LS  TW +H+SSV+EW+  +     Y     N S K   +        A CACT HFF N      L+ LQ+ LT   N T+  +   IYK    ++ 
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSS

Query:  N
        N
Subjt:  N

Q55720 Ycf49-like protein6.8e-2958Show/hide
Query:  NALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSS
        NALS+PTW +HVSSV+EWI A+ALV +Y  K+G   W+ L+WGMVP L  A CACTWHFF N+  L+ LV LQA+ T +GN T+C+AA+ IY+ S Q S+
Subjt:  NALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSS

Q9TM18 Uncharacterized protein ycf495.2e-0536.14Show/hide
Query:  ALSLPTWAIHVSSVVEWITAMALVW---QYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGN
        +LSLPTW IH+ ++VEW   + L++    + D   + ++  +   +   L G F AC WHFF N+  L  +   QA LTA  N
Subjt:  ALSLPTWAIHVSSVVEWITAMALVW---QYGDKSGNESWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGN

Arabidopsis top hitse value%identityAlignment
AT4G22830.1 unknown protein2.1e-4964.6Show/hide
Query:  PISSSSSLSQSVAGIRFPS-ITGAKTLVGLIGTGFTLALL---GPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNES
        P SS ++ ++ V  IR  S I     L GLIGT    A     GP+ A+A   ++ SLQ +EP NALSLPTWA+HVSSVVEWITAMALVW+YG++ G ES
Subjt:  PISSSSSLSQSVAGIRFPS-ITGAKTLVGLIGTGFTLALL---GPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNES

Query:  WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQ
        WKGLSWGMVPLLGGA CACTWHFFYN ESLEVLVALQA LT  GN T+CIAAFRI K S +
Subjt:  WKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQ

AT4G22830.2 unknown protein7.9e-4964.78Show/hide
Query:  SSSSSLSQSVAGIRFPS-ITGAKTLVGLIGTGFTLALL---GPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWK
        SS ++ ++ V  IR  S I     L GLIGT    A     GP+ A+A   ++ SLQ +EP NALSLPTWA+HVSSVVEWITAMALVW+YG++ G ESWK
Subjt:  SSSSSLSQSVAGIRFPS-ITGAKTLVGLIGTGFTLALL---GPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNESWK

Query:  GLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQ
        GLSWGMVPLLGGA CACTWHFFYN ESLEVLVALQA LT  GN T+CIAAFRI K S +
Subjt:  GLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTCACAGTCACCTCCCCATTGTTACCAAATCCCAAATTCCCCATTTCTTCTTCTTCTTCTTTATCTCAATCCGTCGCCGGAATTCGATTTCCCAGCATTACCGG
CGCCAAAACCTTGGTGGGTTTGATCGGCACGGGCTTCACTCTGGCCCTCCTTGGCCCCGAACCGGCTTCTGCCGCCACGGAATTGCTGTCTTCGCTGCAGTTTAACGAGC
CCCAAAACGCTCTCTCCTTGCCCACCTGGGCCATACATGTTTCCAGCGTCGTTGAATGGATTACAGCAATGGCTTTGGTGTGGCAATATGGGGACAAATCTGGCAATGAG
TCTTGGAAAGGACTTTCTTGGGGAATGGTACCATTGTTAGGTGGAGCTTTTTGTGCTTGCACATGGCATTTTTTCTACAACTCCGAGTCTCTTGAGGTATTGGTGGCCCT
TCAGGCGATACTGACGGCTGTAGGAAATGCCACAATGTGCATTGCTGCATTTCGCATTTACAAATCTTCACAACAACGTTCCAGTAACTTGTAA
mRNA sequenceShow/hide mRNA sequence
AAACGGGGTGTTATTAACAGCCCATTCTCAGGAGTAGAGATTGGAGCGGAATTTGGTCCACTCATTCAAATGTTATCGCCATTTTGTGTACTGAAAACAAACGCCACTGT
GAAATGAATTGGGGGATTCGCTAATCTTTCATTTCCAGTCTCCTCCTCAAATCATGTCACTCACAGTCACCTCCCCATTGTTACCAAATCCCAAATTCCCCATTTCTTCT
TCTTCTTCTTTATCTCAATCCGTCGCCGGAATTCGATTTCCCAGCATTACCGGCGCCAAAACCTTGGTGGGTTTGATCGGCACGGGCTTCACTCTGGCCCTCCTTGGCCC
CGAACCGGCTTCTGCCGCCACGGAATTGCTGTCTTCGCTGCAGTTTAACGAGCCCCAAAACGCTCTCTCCTTGCCCACCTGGGCCATACATGTTTCCAGCGTCGTTGAAT
GGATTACAGCAATGGCTTTGGTGTGGCAATATGGGGACAAATCTGGCAATGAGTCTTGGAAAGGACTTTCTTGGGGAATGGTACCATTGTTAGGTGGAGCTTTTTGTGCT
TGCACATGGCATTTTTTCTACAACTCCGAGTCTCTTGAGGTATTGGTGGCCCTTCAGGCGATACTGACGGCTGTAGGAAATGCCACAATGTGCATTGCTGCATTTCGCAT
TTACAAATCTTCACAACAACGTTCCAGTAACTTGTAAATTTAAACAATTCAAGTCTCTGTTATATACACTATATACAATGTTTTATGCATGCTTGTTTTCTCATATTTAT
GAGTTTCATTTTGTGAAGAAAATAATTGAACTCTTAGCCAGCTTAATATGACAAAAAGTAAGATTTTGG
Protein sequenceShow/hide protein sequence
MSLTVTSPLLPNPKFPISSSSSLSQSVAGIRFPSITGAKTLVGLIGTGFTLALLGPEPASAATELLSSLQFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGDKSGNE
SWKGLSWGMVPLLGGAFCACTWHFFYNSESLEVLVALQAILTAVGNATMCIAAFRIYKSSQQRSSNL