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Sed0022072 (gene) of Chayote v1 genome

Gene IDSed0022072
OrganismSechium edule (Chayote v1)
Descriptionprotein RALF-like 10
Genome locationLG06:7444709..7444930
RNA-Seq ExpressionSed0022072
SyntenySed0022072
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]2.9e-0750Show/hide
Query:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG
        +SWL+C+V IS+LVM QEV A   +L     F  P  LP      +S V +  P+NPY RGCSA HRCRG
Subjt:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG

XP_016900883.1 PREDICTED: protein RALF-like 30 [Cucumis melo]3.5e-0548.57Show/hide
Query:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG
        +SWL+C  L+S+LVMG EV A  K+L  LD   QP+  P RS      V +PI    Y RGCS   RCRG
Subjt:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]1.9e-0644.29Show/hide
Query:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG
        +SWL+CLVLI +LV+ Q+V +  K+L   D  +QP   P         + N +P+NPY RGCS   RCRG
Subjt:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]2.5e-0647.14Show/hide
Query:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG
        +SWL+C+VLIS+LV+ QEV +  K+L   D  +QP        L  S + N +P+NPY RGCS   RCRG
Subjt:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]4.0e-0951.43Show/hide
Query:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG
        +SWL+C+V IS+LV+G  V A KKYL  LD   QP   P     + S+V   + +NPY RGCSA HRCRG
Subjt:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein1.3e-0543.84Show/hide
Query:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPT---LLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG
        +SWL+CL LI +LV+GQEV A  K+L  +D   QP+     P+R  +          +NPY R CSA +RCRG
Subjt:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPT---LLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG

A0A0A0LZK3 Uncharacterized protein8.5e-0545.71Show/hide
Query:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG
        +SWL+C  L+S+LVM  EV A  K+LN  D   QP+  P +S        +PI   PY RGCS   RCRG
Subjt:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG

A0A0A0M0X3 Uncharacterized protein1.4e-0750Show/hide
Query:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG
        +SWL+C+V IS+LVM QEV A   +L     F  P  LP      +S V +  P+NPY RGCSA HRCRG
Subjt:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG

A0A1S4DY33 protein RALF-like 301.7e-0548.57Show/hide
Query:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG
        +SWL+C  L+S+LVMG EV A  K+L  LD   QP+  P RS      V +PI    Y RGCS   RCRG
Subjt:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG

A0A6J1G7J2 protein RALF-like 109.1e-0744.29Show/hide
Query:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG
        +SWL+CLVLI +LV+ Q+V +  K+L   D  +QP   P         + N +P+NPY RGCS   RCRG
Subjt:  QSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATCATGGCTGGTATGTTTGGTTTTAATTAGTATATTGGTGATGGGCCAAGAAGTAACAGCACATAAAAAATATCTTAACATTTTGGATAGCTTCAAACAACC
TACTTTGCTTCCACATCGATCTTCATTATCTGCAAGTGATGTTTCTAATCCTATTCCTTCCAATCCCTATACTCGAGGTTGCTCGGCTCATCATCGTTGTCGTGGAAAAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAATCATGGCTGGTATGTTTGGTTTTAATTAGTATATTGGTGATGGGCCAAGAAGTAACAGCACATAAAAAATATCTTAACATTTTGGATAGCTTCAAACAACC
TACTTTGCTTCCACATCGATCTTCATTATCTGCAAGTGATGTTTCTAATCCTATTCCTTCCAATCCCTATACTCGAGGTTGCTCGGCTCATCATCGTTGTCGTGGAAAAT
AA
Protein sequenceShow/hide protein sequence
MKQSWLVCLVLISILVMGQEVTAHKKYLNILDSFKQPTLLPHRSSLSASDVSNPIPSNPYTRGCSAHHRCRGK