| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG8472493.1 hypothetical protein CXB51_034175 [Gossypium anomalum] | 2.3e-66 | 44.92 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
V NRLPT +L+ V P++ L+ P+YS+LRVFGC CFPSLRPYN+HKL FRSR CTFLG+ S HKGYKCL D GR+F+SRHV+FDE +FPF++S S+ +
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
Query: I-VHQTSHVEQNIPVVS---PATSS-------QPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHP
+ + + +H + ++P+VS P SS S++++P+ + P RS S + + ++N P + + P+ + T+ N HP
Subjt: I-VHQTSHVEQNIPVVS---PATSS-------QPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHP
Query: MVTRGKRGIFKPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADI
M+TR K GI KPK+ ++ + EP S++EAF P W Q EY LL N+TW L+P P+ ++ +GC W+FKIKRN+DGS++RYK RLV K + Q A I
Subjt: MVTRGKRGIFKPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADI
Query: DYFET
D+ ET
Subjt: DYFET
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| PNY02430.1 retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Trifolium pratense] | 3.0e-66 | 47.46 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
+ NRLP+ L+ P+ LFHQ P+Y L+VFGC CFP LRPYN HKL +RS C FLGYS HKGY+CL +GR+FIS+ V+F+E FPF ++
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
Query: IVHQTSHVEQNIPVV-SPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGIF
+V S P+V P+ S P+++ SP+ I P +S P SP P T+ S+ N PP +PP + SN HPM+TR K G
Subjt: IVHQTSHVEQNIPVV-SPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGIF
Query: KPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
+P++ IEP SVK+A P WK AMQ EYD LL NNTWTLVP PS + IGC WVF++K+NSDG++++YKARLVAK FHQ ID+ ET
Subjt: KPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
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| RVX03305.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.7e-64 | 47.28 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
+ NRLPTP+L + SP + LFHQ P YSQL+VFGC C+P+LRP+N+HKL FRS PCTFLGYS HKGYKCL +G + ISR V+FDE +FPF + S
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
Query: IVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGIFK
+Q S +++S P T P +L S+ +P T+ ++V SQ PPP +S P +H M+TR K GIFK
Subjt: IVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGIFK
Query: PKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
PK +T P SV EA HWKQ M EY LL+NNTW LVP P+ +K+IGC WVFK+K N +G+I++YKARLVAK FHQ D+ ET
Subjt: PKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
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| RVX03712.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.8e-64 | 47.97 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
+ NRLPTP+L + SP + LFHQ P YSQL+VFGC C+P+LRP+N+HKL FRS PCTFLGYS KGYKCL +G + ISR V+FDE +FPF + S
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
Query: IVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHP--LPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGI
+Q +S +++S P T P +L S+ SP +P P +N ++ PP+ PP PT H M+TR K GI
Subjt: IVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHP--LPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGI
Query: FKPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
FKPK +T P SV EA HWKQAM EY LL+NNTW LVP P+ K+IGC WVFK+K N DG+I++YKARLVAK FHQ A D+ ET
Subjt: FKPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
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| TYK18915.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.0e-67 | 48.86 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
+ N LPTP+L+++SP +K+F + P + LRVFGCKC+P LRPY +HKLS RS PCTFLGYS+ HKGYKCL DGR+FISRHVLFDE SFP+ +S SH
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
Query: IVHQTSHVEQNIPVVSPATSS-QPSNTLSPTHILEGPCVRSSDPSFSPP---HPLPTNTNSVLSQNEPPNQNGINLVP----PPNYT-----SLPTVSNA
S + ++ V+SP S PS+ ++ S + + P +PL T T S + N GI P PP+ T + ++
Subjt: IVHQTSHVEQNIPVVSPATSS-QPSNTLSPTHILEGPCVRSSDPSFSPP---HPLPTNTNSVLSQNEPPNQNGINLVP----PPNYT-----SLPTVSNA
Query: HPMVTRGKRGIFKPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSA
HPM+T+ K IFKPK + Y E + KEAF PHWK+AM+ E+ L KN TW+L+P QKI+GC WVFKIKRNS GSISRYKARLVAK FHQ+
Subjt: HPMVTRGKRGIFKPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSA
Query: DIDYFET
+IDY ET
Subjt: DIDYFET
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3NHD4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) | 1.4e-66 | 47.46 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
+ NRLP+ L+ P+ LFHQ P+Y L+VFGC CFP LRPYN HKL +RS C FLGYS HKGY+CL +GR+FIS+ V+F+E FPF ++
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
Query: IVHQTSHVEQNIPVV-SPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGIF
+V S P+V P+ S P+++ SP+ I P +S P SP P T+ S+ N PP +PP + SN HPM+TR K G
Subjt: IVHQTSHVEQNIPVV-SPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGIF
Query: KPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
+P++ IEP SVK+A P WK AMQ EYD LL NNTWTLVP PS + IGC WVF++K+NSDG++++YKARLVAK FHQ ID+ ET
Subjt: KPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
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| A0A438H844 Retrovirus-related Pol polyprotein from transposon RE1 | 3.9e-64 | 47.62 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
+ NRLPTP+L + SP + LFHQ P YSQL+VFGC C+P+LRP+N+HKL FRS PCTFLGYS HKGYKCL +G + ISR V+FDE +FPF + S
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
Query: IVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGIFK
+Q S +++S P T P +L S+ +P T+ ++V SQ PPP +S P +H M+TR K GIFK
Subjt: IVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGIFK
Query: PKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
PK +T P SV EA HWKQAM EY LL+NNTW LVP P+ +K+IG WVFK+K N DG+I++YKARLVAK FHQ D+ ET
Subjt: PKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
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| A0A438J300 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-64 | 47.28 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
+ NRLPTP+L + SP + LFHQ P YSQL+VFGC C+P+LRP+N+HKL FRS PCTFLGYS HKGYKCL +G + ISR V+FDE +FPF + S
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
Query: IVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGIFK
+Q S +++S P T P +L S+ +P T+ ++V SQ PPP +S P +H M+TR K GIFK
Subjt: IVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGIFK
Query: PKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
PK +T P SV EA HWKQ M EY LL+NNTW LVP P+ +K+IGC WVFK+K N +G+I++YKARLVAK FHQ D+ ET
Subjt: PKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
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| A0A438J431 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-64 | 47.97 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
+ NRLPTP+L + SP + LFHQ P YSQL+VFGC C+P+LRP+N+HKL FRS PCTFLGYS KGYKCL +G + ISR V+FDE +FPF + S
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
Query: IVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHP--LPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGI
+Q +S +++S P T P +L S+ SP +P P +N ++ PP+ PP PT H M+TR K GI
Subjt: IVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHP--LPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKRGI
Query: FKPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
FKPK +T P SV EA HWKQAM EY LL+NNTW LVP P+ K+IGC WVFK+K N DG+I++YKARLVAK FHQ A D+ ET
Subjt: FKPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
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| A0A5D3D5W0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.9e-67 | 48.86 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
+ N LPTP+L+++SP +K+F + P + LRVFGCKC+P LRPY +HKLS RS PCTFLGYS+ HKGYKCL DGR+FISRHVLFDE SFP+ +S SH
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFDDGRMFISRHVLFDEKSFPFEKSSSNVSH
Query: IVHQTSHVEQNIPVVSPATSS-QPSNTLSPTHILEGPCVRSSDPSFSPP---HPLPTNTNSVLSQNEPPNQNGINLVP----PPNYT-----SLPTVSNA
S + ++ V+SP S PS+ ++ S + + P +PL T T S + N GI P PP+ T + ++
Subjt: IVHQTSHVEQNIPVVSPATSS-QPSNTLSPTHILEGPCVRSSDPSFSPP---HPLPTNTNSVLSQNEPPNQNGINLVP----PPNYT-----SLPTVSNA
Query: HPMVTRGKRGIFKPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSA
HPM+T+ K IFKPK + Y E + KEAF PHWK+AM+ E+ L KN TW+L+P QKI+GC WVFKIKRNS GSISRYKARLVAK FHQ+
Subjt: HPMVTRGKRGIFKPKVLYAATYKDIEPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSA
Query: DIDYFET
+IDY ET
Subjt: DIDYFET
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.4e-10 | 44.93 | Show/hide |
Query: WKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
W++A+ E + NNTWT+ P + I+ WVF +K N G+ RYKARLVA+ F Q IDY ET
Subjt: WKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.0e-21 | 30.59 | Show/hide |
Query: CRVFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFD--DGRMFISRHVLFDEKSFPFEKSSS
C + NR P+ L P + ++ YS L+VFGC+ F + KL +S PC F+GY GY+ L+D ++ SR V+F E ++++
Subjt: CRVFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCLFD--DGRMFISRHVLFDEKSFPFEKSSS
Query: NVSHIVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKR
++S V + + N V P+TS+ P++ S T S+ P V+ Q E ++ G+ V P H + R +R
Subjt: NVSHIVHQTSHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSSDPSFSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVSNAHPMVTRGKR
Query: GIFK----PKVLYAATYKDIEPPSVKEAFLCPHWKQ---AMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADI
+ P Y D EP S+KE P Q AMQ E + L KN T+ LV P ++ + C WVFK+K++ D + RYKARLV K F Q I
Subjt: GIFK----PKVLYAATYKDIEPPSVKEAFLCPHWKQ---AMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADI
Query: DYFE
D+ E
Subjt: DYFE
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 4.0e-21 | 51.85 | Show/hide |
Query: MVTRGKRGIFKPKVLYAATYKDI---EPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQS
M+TR K GI K Y+ T EP SV A P W QAMQ E D L +N TW LVP P Q I+GC WVFK K +SDG++ R KARLVAK FHQ
Subjt: MVTRGKRGIFKPKVLYAATYKDI---EPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLVPTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQS
Query: ADIDYFET
I + ET
Subjt: ADIDYFET
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.9e-47 | 35.71 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCL-FDDGRMFISRHVLFDEKSFPFEKSSSNVS
+ NRLPTP+L SPFQKLF P Y +LRVFGC C+P LRPYN HKL +SR C FLGYS Y CL R++ISRHV FDE FPF + +S
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCL-FDDGRMFISRHVLFDEKSFPFEKSSSNVS
Query: HIVHQT----------SHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSS------DPSFS---PPHPLPT------------------------NTN
+ Q + + PV+ + S P + +P P S D SFS P P PT NT+
Subjt: HIVHQT----------SHVEQNIPVVSPATSSQPSNTLSPTHILEGPCVRSS------DPSFS---PPHPLPT------------------------NTN
Query: SVLSQNEPPNQNGINLVPPPNYTS---LPTVS---------------------------------NAHPMVTRGKRGIFKPKVLYAATYK---DIEPPSV
NE P+Q +L P +S PT S N H M TR K GI KP Y+ + EP +
Subjt: SVLSQNEPPNQNGINLVPPPNYTS---LPTVS---------------------------------NAHPMVTRGKRGIFKPKVLYAATYK---DIEPPSV
Query: KEAFLCPHWKQAMQLEYDVLLKNNTWTLV-PTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
+A W+ AM E + + N+TW LV P PS I+GC W+F K NSDGS++RYKARLVAK ++Q +DY ET
Subjt: KEAFLCPHWKQAMQLEYDVLLKNNTWTLV-PTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.7e-49 | 35.25 | Show/hide |
Query: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCL-FDDGRMFISRHVLFDEKSFPFEKSSSNVS
+ NRLPTP+L SPFQKLF Q P Y +L+VFGC C+P LRPYN HKL +S+ C F+GYS Y CL GR++ SRHV FDE+ FPF ++ VS
Subjt: VFNRLPTPILNDVSPFQKLFHQVPEYSQLRVFGCKCFPSLRPYNNHKLSFRSRPCTFLGYSSMHKGYKCL-FDDGRMFISRHVLFDEKSFPFEKSSSNVS
Query: HIVHQTSHVEQN---------IPVVSPA---------------------------TSSQPSNTLS---------PTH--------------------ILE
Q S N P+V PA +S+ PS+++S P+H IL
Subjt: HIVHQTSHVEQN---------IPVVSPA---------------------------TSSQPSNTLS---------PTH--------------------ILE
Query: GPCVRSSDPS------------FSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVS-------NAHPMVTRGKRGIFKPKVLYA---ATYKDI
P S P+ S PH +PT + S+ N P + + PP + P + N H M TR K GI KP Y+ + +
Subjt: GPCVRSSDPS------------FSPPHPLPTNTNSVLSQNEPPNQNGINLVPPPNYTSLPTVS-------NAHPMVTRGKRGIFKPKVLYA---ATYKDI
Query: EPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLV-PTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
EP + +A W+QAM E + + N+TW LV P P + I+GC W+F K NSDGS++RYKARLVAK ++Q +DY ET
Subjt: EPPSVKEAFLCPHWKQAMQLEYDVLLKNNTWTLV-PTPSTQKIIGCNWVFKIKRNSDGSISRYKARLVAKEFHQSADIDYFET
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