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Sed0022146 (gene) of Chayote v1 genome

Gene IDSed0022146
OrganismSechium edule (Chayote v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR6-like protein
Genome locationLG08:2765731..2766285
RNA-Seq ExpressionSed0022146
SyntenySed0022146
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8056731.1 hypothetical protein FH972_013476 [Carpinus fangiana]1.1e-1046.79Show/hide
Query:  MGMEILEQFRPITPLRSLILPKDQK--TEHFQPQET-----EPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNS-VF
        MG+EILE+FRP+TP+R++ + +     TE  +P+ET     +  ECHTP ++   LK  + CPP PKKPRP RRK     SPPP    F+ P DL S VF
Subjt:  MGMEILEQFRPITPLRSLILPKDQK--TEHFQPQET-----EPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNS-VF

Query:  IKLQFPSSK
        + L  PS K
Subjt:  IKLQFPSSK

KAG6587720.1 hypothetical protein SDJN03_16285, partial [Cucurbita argyrosperma subsp. sororia]6.7e-2461.82Show/hide
Query:  MGMEILEQFRPITPLR---SLILPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFIKLQF
        MGME++++FRP+TPLR   SL +PK+++      QE +P EC TPTAA +RLKP MECPP PKKPRPPRRK NFQP     P FF+APQDL SV+ +LQF
Subjt:  MGMEILEQFRPITPLR---SLILPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFIKLQF

Query:  PSSKNITPIS
        P SK I PIS
Subjt:  PSSKNITPIS

KAG6589677.1 hypothetical protein SDJN03_15100, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2464.22Show/hide
Query:  MGMEILEQFRPITPLRSLI--LPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFIKLQFP
        MGME+LE+FRP+TPLRSL   LPK++  ++ Q QE    +C TPTAAA RLKP M CPP PKKPRPPRRK NF P     PPFFEAPQDL+SV+I+LQ P
Subjt:  MGMEILEQFRPITPLRSLI--LPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFIKLQFP

Query:  SSKNITPIS
         SK I PI+
Subjt:  SSKNITPIS

KGN65496.1 hypothetical protein Csa_019987 [Cucumis sativus]2.8e-2265.74Show/hide
Query:  MGMEILEQFRPITPLRSL--ILPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFIKLQFP
        MGMEIL++F P+TPL SL  I+PK  KTE  Q QE +  EC TPTAAAARLKPA+ CPP PKKPRPPRRK NF P     PPFFEAPQDLNSV+ +   P
Subjt:  MGMEILEQFRPITPLRSL--ILPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFIKLQFP

Query:  SSKNITPI
         SK I PI
Subjt:  SSKNITPI

KYP59321.1 hypothetical protein KK1_014753 [Cajanus cajan]2.5e-1046.08Show/hide
Query:  MGMEILEQFRPITPLRSLILPKDQKTEH---------FQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSV
        MG+EILE+FRPITP+R+L+ P  +  +H          +  E E  ECHTPT+ +  L+  + CPPPPKKPR  R++  FQ   PPS  F   P DL SV
Subjt:  MGMEILEQFRPITPLRSLILPKDQKTEH---------FQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSV

Query:  FI
        F+
Subjt:  FI

TrEMBL top hitse value%identityAlignment
A0A0A0M005 Uncharacterized protein1.4e-2265.74Show/hide
Query:  MGMEILEQFRPITPLRSL--ILPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFIKLQFP
        MGMEIL++F P+TPL SL  I+PK  KTE  Q QE +  EC TPTAAAARLKPA+ CPP PKKPRPPRRK NF P     PPFFEAPQDLNSV+ +   P
Subjt:  MGMEILEQFRPITPLRSL--ILPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFIKLQFP

Query:  SSKNITPI
         SK I PI
Subjt:  SSKNITPI

A0A0L9UAV8 Uncharacterized protein8.5e-0944.9Show/hide
Query:  MGMEILEQFRPITPLRSLI-----LPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFI
        MG+EILE FRPITP+R+++        D  T      E    ECHTPT+ + +L+  + CPP PKKPR P R+ N   S PPS  FF    DL S+F+
Subjt:  MGMEILEQFRPITPLRSLI-----LPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFI

A0A0S3RHJ4 Uncharacterized protein8.5e-0944.9Show/hide
Query:  MGMEILEQFRPITPLRSLI-----LPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFI
        MG+EILE FRPITP+R+++        D  T      E    ECHTPT+ + +L+  + CPP PKKPR P R+ N   S PPS  FF    DL S+F+
Subjt:  MGMEILEQFRPITPLRSLI-----LPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFI

A0A151SX09 Uncharacterized protein1.2e-1046.08Show/hide
Query:  MGMEILEQFRPITPLRSLILPKDQKTEH---------FQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSV
        MG+EILE+FRPITP+R+L+ P  +  +H          +  E E  ECHTPT+ +  L+  + CPPPPKKPR  R++  FQ   PPS  F   P DL SV
Subjt:  MGMEILEQFRPITPLRSLILPKDQKTEH---------FQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSV

Query:  FI
        F+
Subjt:  FI

A0A5N6R7V3 Uncharacterized protein5.3e-1146.79Show/hide
Query:  MGMEILEQFRPITPLRSLILPKDQK--TEHFQPQET-----EPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNS-VF
        MG+EILE+FRP+TP+R++ + +     TE  +P+ET     +  ECHTP ++   LK  + CPP PKKPRP RRK     SPPP    F+ P DL S VF
Subjt:  MGMEILEQFRPITPLRSLILPKDQK--TEHFQPQET-----EPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNS-VF

Query:  IKLQFPSSK
        + L  PS K
Subjt:  IKLQFPSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGGAAATTTTGGAACAATTTCGCCCAATTACTCCATTAAGATCACTAATTCTACCAAAAGATCAAAAAACAGAGCATTTTCAACCACAAGAAACAGAGCCGCC
GGAATGCCACACGCCGACCGCCGCCGCCGCCCGCCTGAAGCCGGCCATGGAGTGTCCACCGCCGCCCAAGAAACCTCGGCCTCCTCGAAGGAAGTTCAACTTTCAACCGT
CGCCGCCGCCGTCGCCGCCGTTTTTTGAAGCTCCCCAAGATCTCAATTCTGTGTTCATTAAGCTTCAATTTCCTTCTTCCAAGAACATTACACCCATTTCACCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
CACTATTTCAATTCCTTTCAAATATTTTGATATCAAATCCCACAAATTCAAGTTCTTGCAAAAATGGGTATGGAAATTTTGGAACAATTTCGCCCAATTACTCCATTAAG
ATCACTAATTCTACCAAAAGATCAAAAAACAGAGCATTTTCAACCACAAGAAACAGAGCCGCCGGAATGCCACACGCCGACCGCCGCCGCCGCCCGCCTGAAGCCGGCCA
TGGAGTGTCCACCGCCGCCCAAGAAACCTCGGCCTCCTCGAAGGAAGTTCAACTTTCAACCGTCGCCGCCGCCGTCGCCGCCGTTTTTTGAAGCTCCCCAAGATCTCAAT
TCTGTGTTCATTAAGCTTCAATTTCCTTCTTCCAAGAACATTACACCCATTTCACCTTCTTGATATTTATTTCTTTCCACTAATTATTGTTTCATTATTATGCTTCCTTA
TTTTATTTTAGTTTTTTTTTTATAACAAATTTATTTGGTTAATTTGGGTGTGTGTTTAATAAATGAACAATTTCACAAGCATTCCATTTGTAATTTCATCTCTATTATTC
ATTCA
Protein sequenceShow/hide protein sequence
MGMEILEQFRPITPLRSLILPKDQKTEHFQPQETEPPECHTPTAAAARLKPAMECPPPPKKPRPPRRKFNFQPSPPPSPPFFEAPQDLNSVFIKLQFPSSKNITPISPS