; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0022151 (gene) of Chayote v1 genome

Gene IDSed0022151
OrganismSechium edule (Chayote v1)
DescriptionTF-B3 domain-containing protein
Genome locationLG12:29626557..29627240
RNA-Seq ExpressionSed0022151
SyntenySed0022151
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043114.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]1.3e-4545.37Show/hide
Query:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVKINGPSRVTCCSIQLME------NDDDNVVEQFSASTSKIIINLNEPPPDDEQASAGEDDAKEVPSM
        MVK  Y +N K+V  E Y+  L L  M ++           +  SI +++      N+   +V + +   ++ ++N N    ++  A   + D   +P M
Subjt:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVKINGPSRVTCCSIQLME------NDDDNVVEQFSASTSKIIINLNEPPPDDEQASAGEDDAKEVPSM

Query:  LVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNL
         V      I N+IG CSPPF KQLTKTDV D QGRL + KEFVN +LVPMFN +E L +GI+VTV++SEGR+YDMTF+LW SKLYVL + WK+FY  N L
Subjt:  LVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNL

Query:  TKAGLYVTLWMFRHVGNNTLCFAITRG
        T+   ++TLWMFRHV N+ LCFAI RG
Subjt:  TKAGLYVTLWMFRHVGNNTLCFAITRG

KAG6589940.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4645.98Show/hide
Query:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVKINGPSRVTCCSIQLMENDDDNVVEQFSASTSKIIINLNEPPP--DDEQASAGEDDAKEVPSMLVLV
        MV+  Y  N ++++ + Y+ A   + +                C+ +       +  EQ S STS  + + NE P    DE  +   ++  EV + +V+ 
Subjt:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVKINGPSRVTCCSIQLMENDDDNVVEQFSASTSKIIINLNEPPP--DDEQASAGEDDAKEVPSMLVLV

Query:  PVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTKAG
         +  I+N+IGA SPP+EK+LTK+DV +GQGRL ++KEFV  HL+PMFN +ED  +GI+VTV+N EGRQYDM FKLWASKLYVL +GW +FYK+NNLT  G
Subjt:  PVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTKAG

Query:  LYVTLWMFRHVGNNTLCFAITRGR
        LYVTLWMFRHV  + +CFA+T G+
Subjt:  LYVTLWMFRHVGNNTLCFAITRGR

KAG7023605.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-4458.82Show/hide
Query:  NEPPP--DDEQASAGEDDAKEVPSMLVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDM
        NE P    DE  +   ++  EV + +V+  +  I+N+IGA SPP+EK+LTK+DV +GQGRL ++KEFV  HL+PMFN +ED  +GI+VTV+N EGRQYDM
Subjt:  NEPPP--DDEQASAGEDDAKEVPSMLVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDM

Query:  TFKLWASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHVGNNTLCFAITRGR
         FKLWASKLYVL +GW +FYK+NNLT+ GLYVTLWMFRHV  + +CFA+T G+
Subjt:  TFKLWASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHVGNNTLCFAITRGR

KGN56101.1 hypothetical protein Csa_010492 [Cucumis sativus]1.5e-4645.45Show/hide
Query:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVK-----INGPSRVTCCSIQLMENDDDNVVEQFSASTSKIIINLNEPPPDDEQASA----GEDDAKEV
        MV   Y +N K+V  + YK +L LY M+ ++ V+     I+  +     +   + N+   VV + +   ++++ N ++   ++E  +A    G D  +  
Subjt:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVK-----INGPSRVTCCSIQLMENDDDNVVEQFSASTSKIIINLNEPPPDDEQASA----GEDDAKEV

Query:  PSMLVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKS
               P+  I N+IG CSPPF KQLTKTDV D QGRL + KEFVNL+L PMFND+EDL DGI+V V++ EGR+YDM FKLWASKLYVL + WKEFYK+
Subjt:  PSMLVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKS

Query:  NNLTKAGLYVTLWMFRHVGNNTLCFAITRGR
        N+LT+ G ++++WMFRHV    LCFAI RG+
Subjt:  NNLTKAGLYVTLWMFRHVGNNTLCFAITRGR

XP_031736688.1 uncharacterized protein LOC116402065 [Cucumis sativus]1.6e-4345.38Show/hide
Query:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVKINGPSRVTCCSIQLMENDDDNVVEQFSASTSKIIIN------------LNEPPPDDEQ-----ASA
        MVK RY +N K+V+   Y+ +L L  M  +  +K               E     +  +FS+STS  I+N            +NE  P++       A A
Subjt:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVKINGPSRVTCCSIQLMENDDDNVVEQFSASTSKIIIN------------LNEPPPDDEQ-----ASA

Query:  GEDDAKEVPSMLVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMR
        G D  + VP M V      I N+IG CSPPF KQL KTDV + QGRL + KEFV  +L+PMFN  E+L +GI+VTV++SEGR+YDM FK W SKLYVL +
Subjt:  GEDDAKEVPSMLVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMR

Query:  GWKEFYKSNNLTKAGLYVTLWMFRHVGNNTLCFAITRG
         W +FYKSNNLT+ G ++++WMFRHV N  LCFAI RG
Subjt:  GWKEFYKSNNLTKAGLYVTLWMFRHVGNNTLCFAITRG

TrEMBL top hitse value%identityAlignment
A0A0A0L7L0 TF-B3 domain-containing protein7.4e-4745.45Show/hide
Query:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVK-----INGPSRVTCCSIQLMENDDDNVVEQFSASTSKIIINLNEPPPDDEQASA----GEDDAKEV
        MV   Y +N K+V  + YK +L LY M+ ++ V+     I+  +     +   + N+   VV + +   ++++ N ++   ++E  +A    G D  +  
Subjt:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVK-----INGPSRVTCCSIQLMENDDDNVVEQFSASTSKIIINLNEPPPDDEQASA----GEDDAKEV

Query:  PSMLVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKS
               P+  I N+IG CSPPF KQLTKTDV D QGRL + KEFVNL+L PMFND+EDL DGI+V V++ EGR+YDM FKLWASKLYVL + WKEFYK+
Subjt:  PSMLVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKS

Query:  NNLTKAGLYVTLWMFRHVGNNTLCFAITRGR
        N+LT+ G ++++WMFRHV    LCFAI RG+
Subjt:  NNLTKAGLYVTLWMFRHVGNNTLCFAITRGR

A0A0A0LC65 TF-B3 domain-containing protein1.3e-3863.87Show/hide
Query:  IVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTKAGLYVT
        I N+IG CSPPF KQL KTDV + QGRL + KEFV  +L+PMFN  E+L +GI+VTV++SEGR+YDM FK W SKLYVL + W +FYKSNNLT+ G +++
Subjt:  IVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTKAGLYVT

Query:  LWMFRHVGNNTLCFAITRG
        +WMFRHV N  LCFAI RG
Subjt:  LWMFRHVGNNTLCFAITRG

A0A2P6RSD2 Putative transcription factor B3-Domain family1.8e-2949.61Show/hide
Query:  LVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTK
        L PVPS+  LI  CS PFEKQLT +DV+D Q RL M KE V  HL+P+ N++EDL +GI+VT ++  G++Y M FK W SK++VL  GWK F + + L +
Subjt:  LVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTK

Query:  AGLYVTLWMFRHVGNNTLCFAITRGRRPI
           +VT+WMFR++    LCF I   R P+
Subjt:  AGLYVTLWMFRHVGNNTLCFAITRGRRPI

A0A5D3BAS8 Putative B3 domain-containing protein6.2e-4645.37Show/hide
Query:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVKINGPSRVTCCSIQLME------NDDDNVVEQFSASTSKIIINLNEPPPDDEQASAGEDDAKEVPSM
        MVK  Y +N K+V  E Y+  L L  M ++           +  SI +++      N+   +V + +   ++ ++N N    ++  A   + D   +P M
Subjt:  MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVKINGPSRVTCCSIQLME------NDDDNVVEQFSASTSKIIINLNEPPPDDEQASAGEDDAKEVPSM

Query:  LVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNL
         V      I N+IG CSPPF KQLTKTDV D QGRL + KEFVN +LVPMFN +E L +GI+VTV++SEGR+YDMTF+LW SKLYVL + WK+FY  N L
Subjt:  LVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNL

Query:  TKAGLYVTLWMFRHVGNNTLCFAITRG
        T+   ++TLWMFRHV N+ LCFAI RG
Subjt:  TKAGLYVTLWMFRHVGNNTLCFAITRG

A0A6J1CTE7 putative B3 domain-containing protein At4g031701.8e-3742.02Show/hide
Query:  NGKLVDYEHYKGALNLYAMSRN---EIVKINGPSRVTC-----------------CSIQLMENDDDNVVEQFSASTSKIIINLNEPPPDDEQASAGEDDA
        N K  D E Y+ A+ LY MS++    + +    SR+T                   +  +  N++ NV E+   S+S+      E PPD    +   ++ 
Subjt:  NGKLVDYEHYKGALNLYAMSRN---EIVKINGPSRVTC-----------------CSIQLMENDDDNVVEQFSASTSKIIINLNEPPPDDEQASAGEDDA

Query:  KEVPSMLVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFN---DNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGW
        + +P      PVP+I ++IG CS  +EK+LT +DV + QGRL + KEFV  +L PMFN   +NE+L +GI VTV+N EGR++ MTFK+WASKLYVLM+GW
Subjt:  KEVPSMLVLVPVPSIVNLIGACSPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFN---DNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGW

Query:  KEFYKSNNLT--KAGLYVTLWMFRHVGNNTLCFAITRG
        K F K+NNLT   AG ++TLWMFRH   + LCFAI  G
Subjt:  KEFYKSNNLT--KAGLYVTLWMFRHVGNNTLCFAITRG

SwissProt top hitse value%identityAlignment
Q9LM90 B3 domain-containing protein At1g206001.1e-1037.63Show/hide
Query:  SPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLW-ASKLYVLMRGWKEFYKSNNLTKAGLYVT
        S P +KQL  +DV   Q RL + KE V   ++P   ++ED V G++V+V+  +G    M FK+W   K  VL  GW +F     L K   +VT
Subjt:  SPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLW-ASKLYVLMRGWKEFYKSNNLTKAGLYVT

Q9ZR14 Putative B3 domain-containing protein At4g031702.6e-1741.28Show/hide
Query:  SPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLW-ASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHV
        S P +KQL  +DV   Q  L + KE V   ++P   D+E+ V GI+V+V+  +G+   M FK+W   K  VL  GWK+F +   L+    +VT+WMFRH+
Subjt:  SPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLW-ASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHV

Query:  GNNTLCFAI
            LCFAI
Subjt:  GNNTLCFAI

Q9ZR15 Putative B3 domain-containing protein At4g031604.6e-1437.27Show/hide
Query:  KQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHVGNNTLC
        +QL  +DV+D Q RL + KE V   +  +    +    G+NV+V+   G  + M  K+W     VL  GWK F KS  L K   ++T+WMFRH     +C
Subjt:  KQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHVGNNTLC

Query:  FAITRGRRPI
        FAI   R P+
Subjt:  FAITRGRRPI

Arabidopsis top hitse value%identityAlignment
AT1G20600.1 AP2/B3-like transcriptional factor family protein7.6e-1237.63Show/hide
Query:  SPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLW-ASKLYVLMRGWKEFYKSNNLTKAGLYVT
        S P +KQL  +DV   Q RL + KE V   ++P   ++ED V G++V+V+  +G    M FK+W   K  VL  GW +F     L K   +VT
Subjt:  SPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLW-ASKLYVLMRGWKEFYKSNNLTKAGLYVT

AT4G03160.1 BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1)3.3e-1537.27Show/hide
Query:  KQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHVGNNTLC
        +QL  +DV+D Q RL + KE V   +  +    +    G+NV+V+   G  + M  K+W     VL  GWK F KS  L K   ++T+WMFRH     +C
Subjt:  KQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHVGNNTLC

Query:  FAITRGRRPI
        FAI   R P+
Subjt:  FAITRGRRPI

AT4G03170.1 AP2/B3-like transcriptional factor family protein1.9e-1841.28Show/hide
Query:  SPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLW-ASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHV
        S P +KQL  +DV   Q  L + KE V   ++P   D+E+ V GI+V+V+  +G+   M FK+W   K  VL  GWK+F +   L+    +VT+WMFRH+
Subjt:  SPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLW-ASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHV

Query:  GNNTLCFAI
            LCFAI
Subjt:  GNNTLCFAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAGACCCGCTACTACTTTAATGGTAAATTAGTTGATTATGAACACTACAAAGGAGCTTTGAATCTTTATGCCATGAGTAGAAATGAAATAGTGAAAATAAATGG
ACCGTCGAGGGTGACATGTTGTTCTATTCAATTGATGGAAAACGATGACGACAATGTCGTCGAGCAATTTTCAGCTTCAACTTCAAAAATCATAATCAACCTCAACGAAC
CTCCACCGGACGATGAACAAGCATCGGCCGGTGAAGATGATGCGAAGGAGGTGCCATCAATGCTGGTGTTGGTGCCGGTGCCATCGATAGTGAACTTGATCGGAGCGTGC
AGCCCACCGTTCGAGAAGCAATTGACGAAAACAGATGTGCAGGACGGACAAGGGCGGTTGACTATGAAAAAGGAATTTGTAAATTTGCATTTGGTTCCAATGTTCAATGA
CAATGAGGATTTGGTTGACGGAATTAATGTGACTGTTTTTAATAGCGAAGGGAGGCAATACGACATGACGTTCAAGCTTTGGGCTTCTAAGCTGTACGTTCTCATGAGAG
GGTGGAAGGAGTTTTACAAGAGCAATAATTTGACCAAGGCTGGACTCTACGTCACTTTGTGGATGTTCCGACATGTCGGCAACAACACCCTTTGCTTTGCTATCACTCGT
GGAAGAAGGCCTATTGGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAGACCCGCTACTACTTTAATGGTAAATTAGTTGATTATGAACACTACAAAGGAGCTTTGAATCTTTATGCCATGAGTAGAAATGAAATAGTGAAAATAAATGG
ACCGTCGAGGGTGACATGTTGTTCTATTCAATTGATGGAAAACGATGACGACAATGTCGTCGAGCAATTTTCAGCTTCAACTTCAAAAATCATAATCAACCTCAACGAAC
CTCCACCGGACGATGAACAAGCATCGGCCGGTGAAGATGATGCGAAGGAGGTGCCATCAATGCTGGTGTTGGTGCCGGTGCCATCGATAGTGAACTTGATCGGAGCGTGC
AGCCCACCGTTCGAGAAGCAATTGACGAAAACAGATGTGCAGGACGGACAAGGGCGGTTGACTATGAAAAAGGAATTTGTAAATTTGCATTTGGTTCCAATGTTCAATGA
CAATGAGGATTTGGTTGACGGAATTAATGTGACTGTTTTTAATAGCGAAGGGAGGCAATACGACATGACGTTCAAGCTTTGGGCTTCTAAGCTGTACGTTCTCATGAGAG
GGTGGAAGGAGTTTTACAAGAGCAATAATTTGACCAAGGCTGGACTCTACGTCACTTTGTGGATGTTCCGACATGTCGGCAACAACACCCTTTGCTTTGCTATCACTCGT
GGAAGAAGGCCTATTGGGCTTTGA
Protein sequenceShow/hide protein sequence
MVKTRYYFNGKLVDYEHYKGALNLYAMSRNEIVKINGPSRVTCCSIQLMENDDDNVVEQFSASTSKIIINLNEPPPDDEQASAGEDDAKEVPSMLVLVPVPSIVNLIGAC
SPPFEKQLTKTDVQDGQGRLTMKKEFVNLHLVPMFNDNEDLVDGINVTVFNSEGRQYDMTFKLWASKLYVLMRGWKEFYKSNNLTKAGLYVTLWMFRHVGNNTLCFAITR
GRRPIGL