CuGenDBv2

Gene ID	Sed0022166
Organism	Sechium edule (Chayote v1)
Description	Coatomer subunit zeta
Genome location	LG13:25173738..25179781
RNA-Seq Expression	Sed0022166
Synteny	Sed0022166
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process) GO:0006891 - intra-Golgi vesicle-mediated transport (biological process) GO:0000139 - Golgi membrane (cellular component) GO:0030126 - COPI vesicle coat (cellular component)
InterPro domains	IPR011012 - Longin-like domain superfamily IPR022775 - AP complex, mu/sigma subunit IPR039652 - Coatomer subunit zeta

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038809.1 SNARE-like superfamily protein [Cucumis melo var. makuwa]

4.1e-69

95.71

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTV GD+AVYVVGKD YDELALAEV+FVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

XP_008466411.1 PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo]

3.2e-69

96.43

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTV GDVAVYVVGKD YDELALAEV+FVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

XP_022134177.1 uncharacterized protein LOC111006502 [Momordica charantia]

1.4e-69

97.14

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTV GDVAVYVVGKD YDELALAEV+FVITSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

XP_022936551.1 uncharacterized protein LOC111443125 [Cucurbita moschata]

4.1e-69

96.43

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTV GDVAVYVVGKD YDELALAEV+FV+TSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
        APTER FLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

XP_023536268.1 uncharacterized protein LOC111797492 [Cucurbita pepo subsp. pepo]

4.1e-69

96.43

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTV GDVAVYVVGKD YDELALAEV+FV+TSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
        APTER FLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CRC6 Coatomer subunit zeta

1.5e-69

96.43

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTV GDVAVYVVGKD YDELALAEV+FVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

A0A5A7TBS4 Coatomer subunit zeta

2.0e-69

95.71

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTV GD+AVYVVGKD YDELALAEV+FVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

A0A5D3E691 Coatomer subunit zeta

1.5e-69

96.43

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTV GDVAVYVVGKD YDELALAEV+FVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

A0A6J1BYX2 Coatomer subunit zeta

6.9e-70

97.14

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTV GDVAVYVVGKD YDELALAEV+FVITSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

A0A6J1IMX0 Coatomer subunit zeta

2.0e-69

96.43

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTV GDVAVYVVGKD YDELALAEV+FV+TSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
        APTER FLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

SwissProt top hits

e value

%identity

Alignment

C0HLF1 TSET complex member tstD

1.1e-13

31.88

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Query:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDAC-
        M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V        V+T  GD+ +++ G +  DELAL++V F I  S+KD C 
Subjt:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDAC-

Query:  GKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIK
         K  TE+ F+++  K  L LDEI+  G L+  + + I+
Subjt:  GKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIK

Arabidopsis top hits

e value

%identity

Alignment

AT1G15370.1 SNARE-like superfamily protein

3.3e-64

79.29

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK
        M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLKG KNEEL VA HKSVYIVYT+ GDV++++VGKD YDELALAE +++IT+++KD CGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR
         PTER+FLDKYG+ICLCLDEIVW G+LENT+KDRIKRLIR
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIR

Sequences

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CDS sequence

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ATGTTGCTTGCGGTGCTGATCGCTAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCATGGAGTTCCGGCGGAGGAGCGGTTGCATTGGCGATCCTTTTTAGTGAAGCT
GGGAGCAGATAATCTCAAAGGTGCGAAAAATGAAGAGCTCTTTGTTGCTTCTCACAAGTCTGTATATATTGTTTACACTGTGTTTGGCGATGTTGCAGTTTATGTCGTTG
GGAAGGACGGATATGATGAATTAGCTTTGGCAGAAGTGGTCTTTGTAATAACATCATCTATAAAGGATGCATGTGGGAAAGCTCCAACTGAACGCTTGTTTCTTGACAAA
TATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGACGGGCATCTTGGAGAACACAGAGAAAGACAGGATCAAGAGGCTTATAAGGTATTCTAGACGGATACAACG
TCAGTAA

mRNA sequence

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Protein sequence

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MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVFGDVAVYVVGKDGYDELALAEVVFVITSSIKDACGKAPTERLFLDK
YGKICLCLDEIVWTGILENTEKDRIKRLIRYSRRIQRQ

Sed0022166 (gene) of Chayote v1 genome