CuGenDBv2

Gene ID	Sed0022194
Organism	Sechium edule (Chayote v1)
Description	zinc finger CCCH domain-containing protein 15 homolog
Genome location	LG03:5219518..5220721
RNA-Seq Expression	Sed0022194
Synteny	Sed0022194
Gene Ontology terms	GO:0002181 - cytoplasmic translation (biological process) GO:0005829 - cytosol (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022141384.1 zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia]

6.0e-24

77.78

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Query:  MGAE------EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAE      E+EK+ S N R N +TEA+F+SWKR+KDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAE------EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

XP_022939418.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]

1.5e-22

75.95

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Query:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAE    E+EK+ S N R   +TE +F+SWKR+KDAEASAKRDETARKRA+DIASGAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

XP_022963450.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]

1.0e-23

79.75

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Query:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAE    E EK+ S +  AN +TEA+F+SWKR KDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

XP_022990599.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima]

6.0e-24

79.75

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Query:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAE    E+EK+ S +  AN +TEA+F+SWKR KDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

XP_038906768.1 zinc finger CCCH domain-containing protein 15 homolog [Benincasa hispida]

6.0e-24

82.43

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Query:  GAEEEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        GA E+EK  S N R   +TEA+F+SWKR+KDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  GAEEEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CIH3 zinc finger CCCH domain-containing protein 15 homolog

2.9e-24

77.78

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Query:  MGAE------EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAE      E+EK+ S N R N +TEA+F+SWKR+KDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAE------EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

A0A6J1FLL2 zinc finger CCCH domain-containing protein 15 homolog

7.1e-23

75.95

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Query:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAE    E+EK+ S N R   +TE +F+SWKR+KDAEASAKRDETARKRA+DIASGAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

A0A6J1HI11 zinc finger CCCH domain-containing protein 15 homolog

4.9e-24

79.75

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Query:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAE    E EK+ S +  AN +TEA+F+SWKR KDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

A0A6J1JSG7 zinc finger CCCH domain-containing protein 15 homolog

2.9e-24

79.75

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Query:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAE    E+EK+ S +  AN +TEA+F+SWKR KDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAE----EEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

A0A6J1JUQ1 zinc finger CCCH domain-containing protein 15 homolog

1.6e-22

78.08

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Query:  AEEEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        A E+EK+ S N R   +TE +F+SWKR+KDAEASAKRDETARKRA+DIASGAVQMNGRELFLHQPWVFDN+QY
Subjt:  AEEEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G22140.1 unknown protein

8.3e-16

56.94

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Query:  VGSENGRANLMTEA-----EFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        +G+ NG     T+      +F++WKR+KDAE  AK+ E ARKR EDIASG V MNGRELFLH+PWVFD+T +
Subjt:  VGSENGRANLMTEA-----EFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

AT1G22140.2 unknown protein

1.5e-04

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Query:  VGSENGRANLMTEA-----EFMSWKRRKDAEASAKRDETARKRAEDIASG
        +G+ NG     T+      +F++WKR+KDAE  AK+ E ARKR EDIASG
Subjt:  VGSENGRANLMTEA-----EFMSWKRRKDAEASAKRDETARKRAEDIASG

Sequences

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CDS sequence

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ATGGGCGCAGAAGAAGAAGAGAAGGTGGGATCTGAGAATGGAAGGGCGAATCTGATGACAGAGGCTGAGTTCATGTCCTGGAAGCGACGAAAGGATGCTGAGGCATCTGC
TAAAAGAGACGAAACAGCAAGGAAGCGTGCAGAGGATATAGCCTCAGGAGCGGTGCAAATGAACGGCCGAGAGCTTTTCTTGCACCAACCATGGGTTTTTGATAACACCC
AGTATTGA

mRNA sequence

Show/hide mRNA sequence

TTTTATTTGAATAGAGTCTGGAAAATTATAAGAGGTTGAAGTTGAAGCAGCAATTCAAGAGAATGGGCGCAGAAGAAGAAGAGAAGGTGGGATCTGAGAATGGAAGGGCG
AATCTGATGACAGAGGCTGAGTTCATGTCCTGGAAGCGACGAAAGGATGCTGAGGCATCTGCTAAAAGAGACGAAACAGCAAGGAAGCGTGCAGAGGATATAGCCTCAGG
AGCGGTGCAAATGAACGGCCGAGAGCTTTTCTTGCACCAACCATGGGTTTTTGATAACACCCAGTATTGAGGTTGGTTTTTATTGCAAATATTGTAGTACCACTTTTTGT
GGTTTCTTGAAAAATTGGTTTTTTCCCTTTAAAATGCTACCTTCTATGGTATTCAACATTCATCCTTCATAAGAAATAGTAGTTCTCCCACCCAAAAATTTCCCTCTCTT
GGGCTGTAGTAGCCAAATACGAATCTGTTTAGGTTTCATCGAAAGATATGTTCAAAACTTATGAGTTGGACCATGTACTATCTACTGTTTTAGTTATCGGTTCGTTCTTA
AAGCCCGATACTTGAAGACCGTTTTCGATGGTTGATTTTCTATAACCTGGCTTGTGGGATTGAAAATTAGCACAAAAGTTACCTGAAAT

Protein sequence

Show/hide protein sequence

MGAEEEEKVGSENGRANLMTEAEFMSWKRRKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY

Sed0022194 (gene) of Chayote v1 genome