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Sed0022195 (gene) of Chayote v1 genome

Gene IDSed0022195
OrganismSechium edule (Chayote v1)
DescriptionFlagellar hook-associated protein like
Genome locationLG01:7936298..7937006
RNA-Seq ExpressionSed0022195
SyntenySed0022195
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653233.1 hypothetical protein Csa_019953 [Cucumis sativus]2.1e-3564.75Show/hide
Query:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL----RPPKIV---RRRS
        MASVCISECVD ACI+ A RP TYV+LQR  +EE    ERRRPRPRAA+GISRRQMYLRSYTFSRED V   ++TTQ+C GK+    R P  +   RRRS
Subjt:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL----RPPKIV---RRRS

Query:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRRPK
        RC A+V+A A Q SSG  LL +FRR LCCVA+VD RR +
Subjt:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRRPK
XP_008457578.1 PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo]5.5e-3667.65Show/hide
Query:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL-----RPPKI--VRRRS
        MASVCISECVD ACI+ A +P TYV+LQR  +EE    ERRRPRPRAAEGISRRQMYLRSYTFSRED V   ++TTQ+C GK+     RP +I   RRRS
Subjt:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL-----RPPKI--VRRRS

Query:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSR
        RCFA+V+A A QASSG  L+ MFRR LCCVA+VD R
Subjt:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSR
XP_011648508.1 uncharacterized protein LOC105434501 [Cucumis sativus]2.1e-3564.75Show/hide
Query:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL----RPPKIV---RRRS
        MASVCISECVD ACI+ A RP TYV+LQR  +EE    ERRRPRPRAA+GISRRQMYLRSYTFSRED V   ++TTQ+C GK+    R P  +   RRRS
Subjt:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL----RPPKIV---RRRS

Query:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRRPK
        RC A+V+A A Q SSG  LL +FRR LCCVA+VD RR +
Subjt:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRRPK
XP_022964754.1 uncharacterized protein LOC111464745 [Cucurbita moschata]3.5e-3568.38Show/hide
Query:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL---RPPKIVR---RRSR
        MASVCISEC++ ACIIPA RP TY SLQR  +EEDG  E RRPR RAA+GISRRQMYLRSYTF RED V   +ST Q+CLGKL   R P  +R   RRSR
Subjt:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL---RPPKIVR---RRSR

Query:  CFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRR
        CFA+VRA A +ASSG  LLSMFRR L CVA+VD R+
Subjt:  CFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRR
XP_022970388.1 uncharacterized protein LOC111469389 [Cucurbita maxima]1.4e-3669.12Show/hide
Query:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL---RPPKIVR---RRSR
        MASVCISEC++ ACIIPA RP TY SLQR  +EEDG  E RRPR RAA+GISRRQMYLRSYTFSRED  +  +ST Q+CLGKL   R P  +R   RRSR
Subjt:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL---RPPKIVR---RRSR

Query:  CFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRR
        CFA+VRA A +ASSG  LLSMFRR LCCVA+VD R+
Subjt:  CFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRR
TrEMBL top hitse value%identityAlignment
A0A0A0LXY3 Uncharacterized protein1.0e-3564.75Show/hide
Query:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL----RPPKIV---RRRS
        MASVCISECVD ACI+ A RP TYV+LQR  +EE    ERRRPRPRAA+GISRRQMYLRSYTFSRED V   ++TTQ+C GK+    R P  +   RRRS
Subjt:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL----RPPKIV---RRRS

Query:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRRPK
        RC A+V+A A Q SSG  LL +FRR LCCVA+VD RR +
Subjt:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRRPK
A0A1S3C748 uncharacterized protein LOC1034972452.6e-3667.65Show/hide
Query:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL-----RPPKI--VRRRS
        MASVCISECVD ACI+ A +P TYV+LQR  +EE    ERRRPRPRAAEGISRRQMYLRSYTFSRED V   ++TTQ+C GK+     RP +I   RRRS
Subjt:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL-----RPPKI--VRRRS

Query:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSR
        RCFA+V+A A QASSG  L+ MFRR LCCVA+VD R
Subjt:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSR
A0A5A7SXG3 Uncharacterized protein2.6e-3667.65Show/hide
Query:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL-----RPPKI--VRRRS
        MASVCISECVD ACI+ A +P TYV+LQR  +EE    ERRRPRPRAAEGISRRQMYLRSYTFSRED V   ++TTQ+C GK+     RP +I   RRRS
Subjt:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL-----RPPKI--VRRRS

Query:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSR
        RCFA+V+A A QASSG  L+ MFRR LCCVA+VD R
Subjt:  RCFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSR
A0A6J1HP59 uncharacterized protein LOC1114647451.7e-3568.38Show/hide
Query:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL---RPPKIVR---RRSR
        MASVCISEC++ ACIIPA RP TY SLQR  +EEDG  E RRPR RAA+GISRRQMYLRSYTF RED V   +ST Q+CLGKL   R P  +R   RRSR
Subjt:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL---RPPKIVR---RRSR

Query:  CFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRR
        CFA+VRA A +ASSG  LLSMFRR L CVA+VD R+
Subjt:  CFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRR
A0A6J1I3Q2 uncharacterized protein LOC1114693897.0e-3769.12Show/hide
Query:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL---RPPKIVR---RRSR
        MASVCISEC++ ACIIPA RP TY SLQR  +EEDG  E RRPR RAA+GISRRQMYLRSYTFSRED  +  +ST Q+CLGKL   R P  +R   RRSR
Subjt:  MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKL---RPPKIVR---RRSR

Query:  CFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRR
        CFA+VRA A +ASSG  LLSMFRR LCCVA+VD R+
Subjt:  CFAVVRAVAKQASSGGDLLSMFRRWLCCVAQVDSRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02640.1 unknown protein2.1e-0935.85Show/hide
Query:  MASVCISECVDKA--CIIPATRP--TTYVSLQRCDQEEDGCAERRR-----PRPRAAEGISRRQMYLRSYTFSREDAVDASKS------TTQSCLGKLRP
        M SVCIS C++ A    +P  RP   +YV+L +  + +       R     P  R  + IS RQMYLRSYTFSRED  D SKS      T  SCLG+++ 
Subjt:  MASVCISECVDKA--CIIPATRP--TTYVSLQRCDQEEDGCAERRR-----PRPRAAEGISRRQMYLRSYTFSREDAVDASKS------TTQSCLGKLRP

Query:  PKIVRRRSR---CFAVVRAVA--------------KQASSGGDLLSMFRRWLCCVAQVD
            RR+S+      +V +                KQ  +   +L +FRR L C A VD
Subjt:  PKIVRRRSR---CFAVVRAVA--------------KQASSGGDLLSMFRRWLCCVAQVD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGTTTGCATATCAGAATGCGTCGACAAGGCCTGCATCATTCCCGCCACCCGGCCGACGACATACGTGAGCCTACAGCGGTGTGATCAGGAGGAGGACGGCTG
TGCAGAGCGCCGCCGCCCACGGCCGAGAGCGGCGGAGGGAATTTCCCGCCGGCAAATGTATCTGAGGAGCTATACTTTTTCAAGAGAGGACGCTGTGGACGCCTCTAAGA
GTACTACTCAAAGCTGCCTTGGAAAGCTCAGGCCGCCGAAGATAGTCCGGAGGAGGAGCCGCTGTTTCGCCGTCGTGAGGGCCGTCGCCAAGCAGGCTTCTTCCGGCGGC
GACTTGCTGTCAATGTTTCGACGGTGGCTTTGTTGTGTTGCTCAAGTTGATAGTCGCCGCCCCAAGCATTGGTGA
mRNA sequenceShow/hide mRNA sequence
AATAATAAAAGAAGGAAAAAGAGAGCAATGAGTTGTTAACAATCAAAACAAAATATTATTATAAAGGAGCACTAAGCTCTCAATTGTTATTTCATATCTCTTTAATCCCA
AATTCCCCCATTTTCATTTTCCATAGCAAAAAGCCCATCACCGGCGCCGGAATCTCTCCGCCGACGATATGGCCTCCGTTTGCATATCAGAATGCGTCGACAAGGCCTGC
ATCATTCCCGCCACCCGGCCGACGACATACGTGAGCCTACAGCGGTGTGATCAGGAGGAGGACGGCTGTGCAGAGCGCCGCCGCCCACGGCCGAGAGCGGCGGAGGGAAT
TTCCCGCCGGCAAATGTATCTGAGGAGCTATACTTTTTCAAGAGAGGACGCTGTGGACGCCTCTAAGAGTACTACTCAAAGCTGCCTTGGAAAGCTCAGGCCGCCGAAGA
TAGTCCGGAGGAGGAGCCGCTGTTTCGCCGTCGTGAGGGCCGTCGCCAAGCAGGCTTCTTCCGGCGGCGACTTGCTGTCAATGTTTCGACGGTGGCTTTGTTGTGTTGCT
CAAGTTGATAGTCGCCGCCCCAAGCATTGGTGATCATGACTAAATCCTAATTATATGTTTGGTTGTATCAAAAACTTGGAAAATTAATAAATATCAATAATTGTTTCCTT
TTATATGGAGTTTGAAGTTTAGACAAAAATTGATATTGCTTTGAACAAT
Protein sequenceShow/hide protein sequence
MASVCISECVDKACIIPATRPTTYVSLQRCDQEEDGCAERRRPRPRAAEGISRRQMYLRSYTFSREDAVDASKSTTQSCLGKLRPPKIVRRRSRCFAVVRAVAKQASSGG
DLLSMFRRWLCCVAQVDSRRPKHW