; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0022207 (gene) of Chayote v1 genome

Gene IDSed0022207
OrganismSechium edule (Chayote v1)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationLG01:17100256..17101123
RNA-Seq ExpressionSed0022207
SyntenySed0022207
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054015.1 hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa]1.1e-2168.37Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQ-----RHFCVFEH
        MAATSRLARFISEACPPQFVSVMRRR+P VLDTINEED RE+LAS    +ID+FSVSSP      P P++ AA+AAV SKYFLDQ       F +FEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQ-----RHFCVFEH
KAG6583880.1 hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1878.95Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAA
        MAATSRLARFISEACPPQFVSVMRRR+P VLDTINEEDHREAL+S    +ID+FSVSS P   AA PPS PA SAA
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAA
KAG7019500.1 hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-2378.82Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQ
        MAATSRLARFISEACPPQFVSVMRRR+P VLDTINEEDHREAL+S    +ID+FSVSS P   AA PPS PA SAAV+SKYFL+Q
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQ
KGN65872.1 hypothetical protein Csa_023250 [Cucumis sativus]8.1e-2064.29Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQ-----RHFCVFEH
        MAATSRLARFISEACPPQFVSVMRRR+P VLDTINEED REAL S    +ID+FSV SPP P         +++AA+ SKYFLDQ       F +FEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQ-----RHFCVFEH
PQP93653.1 hypothetical protein Pyn_10926 [Prunus yedoensis var. nudiflora]1.1e-0851.02Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSS---PPFPRAAPPPSAPAASAAVA----SKYFLDQRH--FCVFEH
        M A SRLARFI+E  PPQFVSVMR RT  VLDTINEE+   A  S     S SS        ++PP  A AAS A A    SKYFL + H  F +  H
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSS---PPFPRAAPPPSAPAASAAVA----SKYFLDQRH--FCVFEH
TrEMBL top hitse value%identityAlignment
A0A0A0LYE6 Uncharacterized protein3.9e-2064.29Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQ-----RHFCVFEH
        MAATSRLARFISEACPPQFVSVMRRR+P VLDTINEED REAL S    +ID+FSV SPP P         +++AA+ SKYFLDQ       F +FEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQ-----RHFCVFEH
A0A314XQS6 Uncharacterized protein5.3e-0951.02Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSS---PPFPRAAPPPSAPAASAAVA----SKYFLDQRH--FCVFEH
        M A SRLARFI+E  PPQFVSVMR RT  VLDTINEE+   A  S     S SS        ++PP  A AAS A A    SKYFL + H  F +  H
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSS---PPFPRAAPPPSAPAASAAVA----SKYFLDQRH--FCVFEH
A0A5A7UJX7 Uncharacterized protein5.5e-2268.37Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQ-----RHFCVFEH
        MAATSRLARFISEACPPQFVSVMRRR+P VLDTINEED RE+LAS    +ID+FSVSSP      P P++ AA+AAV SKYFLDQ       F +FEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALAS----QIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQ-----RHFCVFEH
A0A6J5WYZ3 Uncharacterized protein9.1e-0953.19Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSSPPFPRA---APPPSAPAASAAVA--SKYFLDQRH--FCVFEH
        A SRLARFI+E  PPQFVSVMR RT  VLDTINEE+ RE   +  D    SSP    A   + PPS  + SAA    SKYFL + H  F +F H
Subjt:  ATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSSPPFPRA---APPPSAPAASAAVA--SKYFLDQRH--FCVFEH
M5WKN5 Uncharacterized protein9.1e-0952.08Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSSP---PFPRAAPPPSAPAASAAVA----SKYFLDQRH--FCVFEH
        A SRLARFI+E  PPQFVSVMR RT  VLDTI EE+   A  S     S SS         +PP  A AASAA A    SKYFL + H  F +F H
Subjt:  ATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSSP---PFPRAAPPPSAPAASAAVA----SKYFLDQRH--FCVFEH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)6.9e-0952.05Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSSPPFPRAAPPPSAPAASAAVAS
        ATSRLARFI+E  PPQFV+VMRRRT  VLDTI EE+ RE     I   S +S         P + + S+A AS
Subjt:  ATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSSPPFPRAAPPPSAPAASAAVAS
AT4G21060.1 Galactosyltransferase family protein1.1e-0663.41Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRR--TPTVLDTINEEDHRE
        ATSRLARF+SE  PPQFV+VMRR       LDTI EE+++E
Subjt:  ATSRLARFISEACPPQFVSVMRRR--TPTVLDTINEEDHRE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACATCTCGATTGGCGAGGTTCATCAGCGAGGCCTGCCCTCCCCAGTTCGTCTCCGTCATGAGGCGCCGAACCCCCACTGTTCTGGACACCATCAACGAAGA
AGACCACCGCGAAGCCCTGGCCTCCCAGATCGACAGATTCTCCGTTTCTTCCCCGCCGTTCCCCAGGGCCGCCCCGCCGCCGTCTGCTCCGGCAGCCTCCGCCGCCGTCG
CCTCCAAGTACTTTCTCGATCAGAGGCATTTCTGCGTTTTCGAGCACTGA
mRNA sequenceShow/hide mRNA sequence
CTAAATCTTTCAACTTCCTCTCCCACTTTGTCTCCTCTCCTCTTTTCAACTCCGAAATGCAATCGCCCCCTAAAATGAGATTTGAAAGTAGAGGACCAAAAACATAATAT
GAGCTTAAAATAATTCAAACTGTTTATAAAGAATAGGAAGCTAGGGGAGTAAATCCTGAGCGTCGAAAAGCATGACGTGGAAGCGCGATGGCCATGCGCTTTCTCTATAA
AAACCCCCATTGTCCTGCAAGCTTCACCACAAGCAAGCAATCCCCAATCCAATCCAATTGGAACAAATTGAGGCTCTTCTTTGTCTGAAATCCGAAACCCTAATCTTCAG
GCATGGCAGCCACATCTCGATTGGCGAGGTTCATCAGCGAGGCCTGCCCTCCCCAGTTCGTCTCCGTCATGAGGCGCCGAACCCCCACTGTTCTGGACACCATCAACGAA
GAAGACCACCGCGAAGCCCTGGCCTCCCAGATCGACAGATTCTCCGTTTCTTCCCCGCCGTTCCCCAGGGCCGCCCCGCCGCCGTCTGCTCCGGCAGCCTCCGCCGCCGT
CGCCTCCAAGTACTTTCTCGATCAGAGGCATTTCTGCGTTTTCGAGCACTGAGAAAGAATCCGGGTTTCCTTTTTGTGCCCATCGGGTCGGGTTCACTCTGCCCAGGAAT
GGTGTTGTTGTACATATCGTGTCCACCGCGGATTCAGTTGTTTAGGAAATTTCTGATTGGGTCTCGTCTTGTACTGTCTAATTTGGTGTTTTATGCGCTTTTATTATAAA
TTTATTTGTTTCCGTATCATATATTGTAGGATTGATTGAATGGATTTTATTTTATAATCACAAAACACCAAACCATACCATTTCAAATGAATCGAATC
Protein sequenceShow/hide protein sequence
MAATSRLARFISEACPPQFVSVMRRRTPTVLDTINEEDHREALASQIDRFSVSSPPFPRAAPPPSAPAASAAVASKYFLDQRHFCVFEH