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Sed0022222 (gene) of Chayote v1 genome

Gene IDSed0022222
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG13:14577969..14578241
RNA-Seq ExpressionSed0022222
SyntenySed0022222
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2772.73Show/hide
Query:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYT
        M  K+KTYQ RPK+SR+QLS+IFRNHD +GDGRL+ TELT AFRYIGA LP  RA HALL+TDSD DG+I EKDFE L+ YAEKR+YT
Subjt:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYT

KAG6600743.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia]7.9e-3175.56Show/hide
Query:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII
        MP KTK Y QRPK+SRQQL +IFRNHD +GDGRL++ ELT+AF YIGALLP  RA HALLYTDSDRDG+IDEKDFE L+ YAEKR+YT+I
Subjt:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII

KAG6600744.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]4.6e-3175.56Show/hide
Query:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII
        MP KTKTY  RP++SR+QL LIFRNHD NGDGRL++ ELT+AF YIGALLP  RA HALLYTDSDRDG+IDEKDFE L+ YAEKR+YT+I
Subjt:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2873.33Show/hide
Query:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII
        M  K K  Q RPK+SR+QLS+IFRNHD +GDGRL+ATELTEAFRYIGA LP  RA HAL YTDSDRDG+I EKDFESL+ Y EKR YTI+
Subjt:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-2872.22Show/hide
Query:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII
        M  K+KTYQ RPK+SR+QLS+IFRNHD +GDGRL+ TELT AFRYIGA LP  RA HALL+TDSD DG+I EKDFE L+ YAEKR+YT+I
Subjt:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein3.4e-2771.11Show/hide
Query:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII
        M  K+K Y  R K+SR+QL LIFRNHD + DGRL+ TELTEAFRYIGA LP  RARHALL+ DSDRDG+I EKDFESL+ YAE+R+YTII
Subjt:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII

A0A438DYH7 Uncharacterized protein4.0e-1247.56Show/hide
Query:  KTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREY
        KT   +  +  QQL  IF+ HD NGDG+LN  EL +AF+++GAL+P  RA  AL + D+D DG I EK+ + L+ YA K  Y
Subjt:  KTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREY

A0A5A7VDB9 Putative calcium-binding protein CML275.7e-2767.78Show/hide
Query:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII
        M  ++KTY  R ++SR+QL LIFRNHD + DGRL+ TELTEAFRYIGA LPP RARHAL + DSDRDG+I EKDFE L+ YAE+R+YT+I
Subjt:  MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII

A0A803LVB7 Uncharacterized protein1.3e-1044.83Show/hide
Query:  CKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTI
        C  K+ +++ ++S  QL  IF+ HD NGDG L+  EL EAFR +GA +P  RA +A+ YTD D DG I+E + + L+ YA +  YT+
Subjt:  CKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTI

A5AWP8 Uncharacterized protein2.8e-1348.81Show/hide
Query:  KTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTI
        KT   +  +  QQL  IF+ HD NGDG+LN  EL +AF+++GAL+P  RA  AL + D+D DG I EK+ + L+ YA K  YTI
Subjt:  KTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTI

SwissProt top hitse value%identityAlignment
O81701 Polcalcin Aln g 41.0e-0435.59Show/hide
Query:  IFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLR
        IF+  D NGDG+++A+EL +A + +G++ P    +H +   D+D DG+I  ++F +  R
Subjt:  IFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLR

Q0DJV6 Probable calcium-binding protein CML182.2e-0741.94Show/hide
Query:  MSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDF
        M   +L  +FR +D NGDG+++A EL    R +GA L P   R  +   DSDRDG++D  +F
Subjt:  MSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDF

Q39419 Polcalcin Bet v 45.9e-0538.89Show/hide
Query:  IFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDF
        IF+  D NGDG+++A EL EA + +G++ P    +H +   D+D DG+I  ++F
Subjt:  IFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDF

Q6L4D4 Probable calcium-binding protein CML155.9e-0533.82Show/hide
Query:  RPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESL
        RP  +  +   +FR  D NGDGR++  EL   FR +G  +        +   DSD DGYI   +F ++
Subjt:  RPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESL

Q9LE22 Probable calcium-binding protein CML277.7e-0534.38Show/hide
Query:  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLR
        ++L  +F   D NGDG+++  EL   F+ +G           L   D+DRDGYI+  +F +L R
Subjt:  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLR

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein5.5e-0634.38Show/hide
Query:  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLR
        ++L  +F   D NGDG+++  EL   F+ +G           L   D+DRDGYI+  +F +L R
Subjt:  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLR

AT1G18210.2 Calcium-binding EF-hand family protein5.5e-0634.38Show/hide
Query:  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLR
        ++L  +F   D NGDG+++  EL   F+ +G           L   D+DRDGYI+  +F +L R
Subjt:  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLR

AT1G76650.1 calmodulin-like 383.6e-0531.43Show/hide
Query:  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKRE
        ++L  +F   D N DGR++  EL ++F  +G  L    A  A+  +D+D DG +D ++F  L++  ++ E
Subjt:  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKRE

AT1G76650.3 calmodulin-like 383.6e-0531.43Show/hide
Query:  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKRE
        ++L  +F   D N DGR++  EL ++F  +G  L    A  A+  +D+D DG +D ++F  L++  ++ E
Subjt:  QQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKRE

AT4G12860.1 EF hand calcium-binding protein family1.6e-0533.85Show/hide
Query:  MSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESL
        M R +LS +F+  D NGDG++   EL + F+ +G ++P       +   D + DG +D  +F SL
Subjt:  MSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGCAAAACCAAAACCTACCAGCAAAGGCCGAAGATGTCTAGACAACAGCTGAGCCTAATCTTTAGAAACCACGACCACAACGGCGACGGCCGCCTCAATGCCAC
CGAGCTCACAGAAGCCTTTCGTTACATTGGTGCTCTTCTGCCACCGTTGAGAGCTCGCCATGCTCTTCTATACACTGATTCTGATAGAGATGGATACATCGACGAAAAGG
ATTTTGAATCTCTCCTCAGATATGCCGAGAAACGAGAATATACCATCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTGCAAAACCAAAACCTACCAGCAAAGGCCGAAGATGTCTAGACAACAGCTGAGCCTAATCTTTAGAAACCACGACCACAACGGCGACGGCCGCCTCAATGCCAC
CGAGCTCACAGAAGCCTTTCGTTACATTGGTGCTCTTCTGCCACCGTTGAGAGCTCGCCATGCTCTTCTATACACTGATTCTGATAGAGATGGATACATCGACGAAAAGG
ATTTTGAATCTCTCCTCAGATATGCCGAGAAACGAGAATATACCATCATTTGA
Protein sequenceShow/hide protein sequence
MPCKTKTYQQRPKMSRQQLSLIFRNHDHNGDGRLNATELTEAFRYIGALLPPLRARHALLYTDSDRDGYIDEKDFESLLRYAEKREYTII