; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0022229 (gene) of Chayote v1 genome

Gene IDSed0022229
OrganismSechium edule (Chayote v1)
Descriptionzinc finger protein GIS2
Genome locationLG05:35443593..35446702
RNA-Seq ExpressionSed0022229
SyntenySed0022229
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572065.1 DNA-binding protein HEXBP, partial [Cucurbita argyrosperma subsp. sororia]3.0e-14795.37Show/hide
Query:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP
        MSSD SRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFAREC +VAICHNCGLPGHIA ECTTKSLCWNCREPGHMASSCP
Subjt:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP

Query:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGGS
        NEGICHTCGKAGHRARECTA  +PPGDLRLCNNCYKQGH AADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+R DRG GGGS
Subjt:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGGS

Query:  VRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        VRGGAGGYRDVVCR CQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
Subjt:  VRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY

XP_004148537.1 zinc finger protein GIS2 [Cucumis sativus]1.7e-14795.02Show/hide
Query:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP
        MSSD SRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIA ECTTKSLCWNCREPGHMASSCP
Subjt:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP

Query:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG
        NEGICHTCGKAGHRAR+CTA PMPPGDLRLCNNCYKQGH AADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+RGDRGI  GG
Subjt:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        GS RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDR+PRRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY

XP_008448055.1 PREDICTED: zinc finger protein GIS2 [Cucumis melo]1.3e-14795.02Show/hide
Query:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP
        MSSD SRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIA ECTTKSLCWNCREPGHMASSCP
Subjt:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP

Query:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG
        NEGICHTCGKAGHRAR+CTA P+PPGDLRLCNNCYKQGH AADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+RGDRGI  GG
Subjt:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        GS RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY

XP_022953059.1 zinc finger protein GIS2-like [Cucurbita moschata]2.3e-14795Show/hide
Query:  MSSD-RSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSC
        MSSD RSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRES RGFSRDNLCKNCKRPGHFAREC +VAICHNCGLPGHIA ECTTKSLCWNCREPGHMASSC
Subjt:  MSSD-RSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSC

Query:  PNEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGG
        PNEGICHTCGKAGHRARECTA P+PPGDLRLCNNCYKQGH AADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+R DRG GGG
Subjt:  PNEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        SVRGGAGGYRDVVCR CQQL HMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY

XP_038887879.1 zinc finger protein GIS2 [Benincasa hispida]9.2e-14995.79Show/hide
Query:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP
        MSSD SRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIA ECTTKSLCWNCREPGHMASSCP
Subjt:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP

Query:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG
        NEGICHTCGKAGHRAR+CTA PMPPGDLRLCNNCYKQGH AADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+RGDRGI  GG
Subjt:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        GS RGGA GYRDVVCRNCQQLGHMSRDCMGPL+ICHNCGGRGHLAYECPSGRFMDRYPRRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY

TrEMBL top hitse value%identityAlignment
A0A0A0K138 Uncharacterized protein8.4e-14895.02Show/hide
Query:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP
        MSSD SRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIA ECTTKSLCWNCREPGHMASSCP
Subjt:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP

Query:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG
        NEGICHTCGKAGHRAR+CTA PMPPGDLRLCNNCYKQGH AADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+RGDRGI  GG
Subjt:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        GS RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDR+PRRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY

A0A1S3BIU7 zinc finger protein GIS26.5e-14895.02Show/hide
Query:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP
        MSSD SRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIA ECTTKSLCWNCREPGHMASSCP
Subjt:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP

Query:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG
        NEGICHTCGKAGHRAR+CTA P+PPGDLRLCNNCYKQGH AADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+RGDRGI  GG
Subjt:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        GS RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY

A0A6J1C2F8 zinc finger protein GIS23.5e-14693.89Show/hide
Query:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP
        MSSD SRSRSRSRSRSPLDRKIRSDRF+YRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIA ECTTKSLCWNCREPGHMA+SCP
Subjt:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP

Query:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG
        NEGICHTCGKAGHRARECTA P+PPGDLRLCNNCYKQGH AADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSN+L +R DRGI  GG
Subjt:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG

Query:  GSVRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        GSVRGG+ GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  GSVRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY

A0A6J1GNK1 zinc finger protein GIS2-like1.1e-14795Show/hide
Query:  MSSD-RSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSC
        MSSD RSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRES RGFSRDNLCKNCKRPGHFAREC +VAICHNCGLPGHIA ECTTKSLCWNCREPGHMASSC
Subjt:  MSSD-RSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSC

Query:  PNEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGG
        PNEGICHTCGKAGHRARECTA P+PPGDLRLCNNCYKQGH AADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+R DRG GGG
Subjt:  PNEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGG

Query:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        SVRGGAGGYRDVVCR CQQL HMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
Subjt:  SVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY

A0A6J1I6P4 zinc finger protein GIS2-like7.9e-14693.49Show/hide
Query:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP
        MSSD SRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIA ECTTKSLCWNCREPGH+ASSC 
Subjt:  MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCP

Query:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG
        NEGICHTCGKAGHRARECTA P+PPGDLRLCNNCYKQGH AADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+RGDRGI  GG
Subjt:  NEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGI--GG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        GS+RGG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY

SwissProt top hitse value%identityAlignment
P36627 Cellular nucleic acid-binding protein homolog2.0e-2132.62Show/hide
Query:  CHNCGLPGHIALECTTKSLCWNCREPGHMASSC---PNEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDC
        C+NCG  GH A ECT  S+C+NC + GH AS C     E  C+ CG AGH  R+C + P P      C  C + GH A DC      +  R  GH     
Subjt:  CHNCGLPGHIALECTTKSLCWNCREPGHMASSC---PNEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDC

Query:  PNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCM--GPLMICHNCGGRGHLAYECPS
         ++  C  C   GH AR C                            V C +C ++GH S +C       +C+ C   GH+A  C S
Subjt:  PNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCM--GPLMICHNCGGRGHLAYECPS

P53849 Zinc finger protein GIS23.9e-2538.16Show/hide
Query:  CKNCKRPGHFARECPNVAICHNCGLPGHIALECTTK-----SLCWNCREPGHMASSCPNEGICHTCGKAGHRARECTALPMPPGDLRLCN-NCYKQG---
        C  C + GH A +C +  +C+NC  PGH+  +CT         C+NC E GH+ S C  +  C  C + GH +REC   P P    R    +CYK G   
Subjt:  CKNCKRPGHFARECPNVAICHNCGLPGHIALECTTK-----SLCWNCREPGHMASSCPNEGICHTCGKAGHRARECTALPMPPGDLRLCN-NCYKQG---

Query:  HFAADCTNEKA-----CNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKS
        H A DC  E       C  C + GH++RDC ND +C  CN +GH+++ CPK+
Subjt:  HFAADCTNEKA-----CNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKS

P62633 Cellular nucleic acid-binding protein1.7e-2034.48Show/hide
Query:  NLCKNCKRPGHFARECPNVA-----------------------------ICHNCGLPGHIALEC-TTKSLCWNCREPGHMASSC-----PNEGICHTCGK
        N C  C R GH+ARECP                                IC+ CG  GH+A +C   +  C+NC   GH+A  C       E  C+ CGK
Subjt:  NLCKNCKRPGHFARECPNVA-----------------------------ICHNCGLPGHIALEC-TTKSLCWNCREPGHMASSC-----PNEGICHTCGK

Query:  AGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC
         GH AR+C        D + C +C + GH   DCT  K C  C +TGH+A +C   ++  C  C  SGH+AR+C
Subjt:  AGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC

Q04832 DNA-binding protein HEXBP5.8e-2929.78Show/hide
Query:  CKNCKRPGHFARECPNV--------AICHNCGLPGHIALECTTKS--------LCWNCREPGHMASSCPNEG--------ICHTCGKAGHRARECT----
        C+NC + GH+ARECP            C  CG  GH++ EC  ++         C+ C E GHM+  CPN           C+ CG+ GH +R+C     
Subjt:  CKNCKRPGHFARECPNV--------AICHNCGLPGHIALECTTKS--------LCWNCREPGHMASSCPNEG--------ICHTCGKAGHRARECT----

Query:  --------------ALPMPPGDLRLCNNCYKQGHFAADCTN---------EKACNNCRKTGHLARDCPN---------DPICNLCNVSGHVARQCPKSNV
                      A     GD R C  C   GH + DC N         ++ C  C   GH++RDCPN         D  C  C  SGH++R+CP +  
Subjt:  --------------ALPMPPGDLRLCNNCYKQGHFAADCTN---------EKACNNCRKTGHLARDCPN---------DPICNLCNVSGHVARQCPKSNV

Query:  LGERGDRGIGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCM-----------GPLMICHNCGGRGHLAYECPS
                        G+ G  D  C  C + GH+SR+C            G    C+ CG  GH++ +CPS
Subjt:  LGERGDRGIGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCM-----------GPLMICHNCGGRGHLAYECPS

Q3T0Q6 Cellular nucleic acid-binding protein2.6e-2135.93Show/hide
Query:  NLCKNCKRPGHFARECPNVA----------------------ICHNCGLPGHIALEC-TTKSLCWNCREPGHMASSC-----PNEGICHTCGKAGHRARE
        N C  C R GH+ARECP                         IC+ CG  GH+A +C   +  C+NC   GH+A  C       E  C+ CGK GH AR+
Subjt:  NLCKNCKRPGHFARECPNVA----------------------ICHNCGLPGHIALEC-TTKSLCWNCREPGHMASSC-----PNEGICHTCGKAGHRARE

Query:  CTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC
        C        D + C +C + GH   DCT  K C  C +TGH+A +C   ++  C  C  SGH+AR+C
Subjt:  CTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC

Arabidopsis top hitse value%identityAlignment
AT1G75560.1 zinc knuckle (CCHC-type) family protein1.6e-9563.88Show/hide
Query:  SSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSC
        S  RSRSR R RSRSP DR++RS+R SY DAP R  RE RR FS+ NLC NCKRPGHFAR+C NV++C+NCGLPGHIA ECT +S CWNCREPGH+AS+C
Subjt:  SSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSC

Query:  PNEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGERGDRGIGG
         NEGICH+CGK+GHRAR+C+      GDLRLCNNC+KQGH AADCTN+KAC NCR +GH+ARDC NDP+CN+C++SGHVAR CPK +    +RG R   G
Subjt:  PNEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGERGDRGIGG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        G  RGG              L  MSRD  G   ++ICHNCGGRGH AYECPS R  DR  RRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMDRYPRRY

AT1G75560.2 zinc knuckle (CCHC-type) family protein1.6e-9563.88Show/hide
Query:  SSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSC
        S  RSRSR R RSRSP DR++RS+R SY DAP R  RE RR FS+ NLC NCKRPGHFAR+C NV++C+NCGLPGHIA ECT +S CWNCREPGH+AS+C
Subjt:  SSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSC

Query:  PNEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGERGDRGIGG
         NEGICH+CGK+GHRAR+C+      GDLRLCNNC+KQGH AADCTN+KAC NCR +GH+ARDC NDP+CN+C++SGHVAR CPK +    +RG R   G
Subjt:  PNEGICHTCGKAGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGERGDRGIGG

Query:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMDRYPRRY
        G  RGG              L  MSRD  G   ++ICHNCGGRGH AYECPS R  DR  RRY
Subjt:  GSVRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMDRYPRRY

AT2G17870.1 cold shock domain protein 32.2e-1531.94Show/hide
Query:  CWNCREPGHMASSCP-----------------NEGICHTCGKAGHRARECTA-----LPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDC
        C+NC E GHMA  C                   EG C+ CG  GH AR+C            G  R C +C + GH A DC      N  R  G   R  
Subjt:  CWNCREPGHMASSCP-----------------NEGICHTCGKAGHRARECTA-----LPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDC

Query:  PNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPL--------MICHNCGGRGHLAYEC
          D  C +C   GH AR C           R  GGG+V GG        C  C  +GH+++ C   +          C+ CGG GHLA +C
Subjt:  PNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGGSVRGGAGGYRDVVCRNCQQLGHMSRDCMGPL--------MICHNCGGRGHLAYEC

AT3G43590.1 zinc knuckle (CCHC-type) family protein3.2e-1428.96Show/hide
Query:  SRDNLCKNCKRPGHFARECPNV-------AICHNCGLPGHIALECTTK--------SLCWNCREPGHMASSCPNEGI-----CHTCGKAGHRAREC----
        S+ + C  CK+ GH A++CP+        A+C  CG  GH  + C  +          C+ C+  GH+    P   +     C+ CG+ GH    C    
Subjt:  SRDNLCKNCKRPGHFARECPNV-------AICHNCGLPGHIALECTTK--------SLCWNCREPGHMASSCPNEGI-----CHTCGKAGHRAREC----

Query:  -------TALPMPPGDLRLCNNCYK---QGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGER
               +A P    + R  + CY+   +GHFA +C N  + +    T H  R+  +  +C  CN SGH AR+CP S+ + +R
Subjt:  -------TALPMPPGDLRLCNNCYK---QGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGER

AT4G36020.1 cold shock domain protein 17.8e-2130.6Show/hide
Query:  NLCKNCKRPGHFARECPNVAICHNCGLPGHIALEC-------------TTKSLCWNCREPGHMASSCPNEGI-------------CHTCGKAGHRARECT
        +L K     G+ AR     + C+NCG  GHI+ +C                  C+NC + GH A  C + G              C+TCG  GH AR+CT
Subjt:  NLCKNCKRPGHFARECPNVAICHNCGLPGHIALEC-------------TTKSLCWNCREPGHMASSCPNEGI-------------CHTCGKAGHRARECT

Query:  ALPMPPGDLR--------LCNNCYKQGHFAADCTNEKA-------------CNNCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLGERGDR
           +  GD R         C  C   GHFA DCT + A             C +C   GH+ARDC         C  C  SGH+AR C +          
Subjt:  ALPMPPGDLR--------LCNNCYKQGHFAADCTNEKA-------------CNNCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLGERGDR

Query:  GIGGGSVRGGAGGYRDVVCRNCQQLGHMSRDC
               RG  GG  D  C  C + GH +R+C
Subjt:  GIGGGSVRGGAGGYRDVVCRNCQQLGHMSRDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGATAGGAGTCGGAGCAGAAGCAGAAGCAGGAGCAGGAGCCCACTGGATCGTAAGATCCGGTCTGATCGATTTTCATATCGCGATGCACCATACAGGAGAGA
ATCACGTCGGGGTTTCAGTCGAGACAATCTGTGCAAGAACTGCAAGCGGCCCGGTCACTTTGCCAGAGAATGCCCCAATGTGGCAATCTGTCACAACTGTGGTCTCCCTG
GGCATATTGCTTTAGAGTGCACAACAAAGTCACTATGTTGGAATTGTCGAGAACCCGGTCACATGGCGAGTAGCTGTCCCAATGAAGGCATCTGCCACACCTGTGGGAAG
GCGGGGCATCGAGCCAGGGAATGCACGGCCCTTCCTATGCCACCCGGGGACTTGAGGCTTTGCAACAATTGCTACAAGCAAGGTCATTTTGCAGCTGATTGTACTAATGA
GAAGGCATGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGTGATTGTCCTAATGACCCTATTTGCAACCTGTGTAATGTATCAGGGCATGTGGCCAGACAGTGTCCGA
AATCCAATGTCCTCGGAGAACGGGGAGACCGAGGCATCGGCGGTGGTAGTGTACGAGGGGGTGCTGGTGGTTACCGGGATGTTGTGTGCAGGAACTGCCAGCAGCTTGGC
CATATGAGTCGGGATTGCATGGGCCCATTGATGATATGTCATAACTGCGGAGGACGTGGACACCTGGCATACGAATGCCCTTCTGGTCGGTTTATGGATCGTTATCCCAG
AAGGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATCTTCGTTCTCCCGCAAAACTTCCCTCTGTTGCAGCTTCGTTACCAATCTCACTTCTTCAGCCATTGGAGCCACAACAACATCGCCCACAAACACAGATCCATTCAAAT
TAGGGCGGAGGCAGCATCAGTGTGATATTTTGGAGGTGGTGGTATTTTCACGTATCAGTGGGGATAAGTATTGAAGGATAAGTTTGGAGATGAGTTCAGATAGGAGTCGG
AGCAGAAGCAGAAGCAGGAGCAGGAGCCCACTGGATCGTAAGATCCGGTCTGATCGATTTTCATATCGCGATGCACCATACAGGAGAGAATCACGTCGGGGTTTCAGTCG
AGACAATCTGTGCAAGAACTGCAAGCGGCCCGGTCACTTTGCCAGAGAATGCCCCAATGTGGCAATCTGTCACAACTGTGGTCTCCCTGGGCATATTGCTTTAGAGTGCA
CAACAAAGTCACTATGTTGGAATTGTCGAGAACCCGGTCACATGGCGAGTAGCTGTCCCAATGAAGGCATCTGCCACACCTGTGGGAAGGCGGGGCATCGAGCCAGGGAA
TGCACGGCCCTTCCTATGCCACCCGGGGACTTGAGGCTTTGCAACAATTGCTACAAGCAAGGTCATTTTGCAGCTGATTGTACTAATGAGAAGGCATGCAACAATTGCAG
GAAGACAGGCCATCTTGCTCGTGATTGTCCTAATGACCCTATTTGCAACCTGTGTAATGTATCAGGGCATGTGGCCAGACAGTGTCCGAAATCCAATGTCCTCGGAGAAC
GGGGAGACCGAGGCATCGGCGGTGGTAGTGTACGAGGGGGTGCTGGTGGTTACCGGGATGTTGTGTGCAGGAACTGCCAGCAGCTTGGCCATATGAGTCGGGATTGCATG
GGCCCATTGATGATATGTCATAACTGCGGAGGACGTGGACACCTGGCATACGAATGCCCTTCTGGTCGGTTTATGGATCGTTATCCCAGAAGGTACTGATAATCTAAATA
GCTTAACCATATGTCGTCGATGTGGTTAGACCTTTGGATTTTGCTTCTGAGTTTAGATCATTTAGAGTGTCCAACTTTCTTGCATTGTACTATTTGATTGTCTTATGTTA
TCAAACATTGTTTTGAGGGACGATGAATTTTAAGTATTCTTGCTTTTTGGTTCAATTATAATAAGACTGATTCAGTAGTTTGGATTTTGCTCGTAATGAAATTCGTTTGT
GAACTACCATGACCCGTTTTGAGATGCCGTTGTAAACTTACGATGCTAGGGCTTTTTCTCCATTGCAATTCCTCACGAGCAAAATGACTCGTTTAGGGTGATTGGATTTT
GGTGTTGAAAAGAGGAGGGGAGAGAATGTTGAAGAAAAATAGGAAGTAGAGTGATTTGGAGATATGAAATAGTTGTTTGGAGATTGATGTTTTAGAGAGG
Protein sequenceShow/hide protein sequence
MSSDRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIALECTTKSLCWNCREPGHMASSCPNEGICHTCGK
AGHRARECTALPMPPGDLRLCNNCYKQGHFAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGERGDRGIGGGSVRGGAGGYRDVVCRNCQQLG
HMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY