; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0022233 (gene) of Chayote v1 genome

Gene IDSed0022233
OrganismSechium edule (Chayote v1)
DescriptionRING-type domain-containing protein
Genome locationLG07:1880368..1881699
RNA-Seq ExpressionSed0022233
SyntenySed0022233
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026218.1 nucleolin-like [Cucumis melo var. makuwa]3.3e-12269.92Show/hide
Query:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAA
        MEGGRRRITLYDQMLAV +GR+L    TLNDVLTI KR+SPSPSPAVRL  RTLLDIIRDDVGKSP  NR+RKSWKFLRDRLRLNLRSQIPPP SL F  
Subjt:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAA

Query:  FPTAEMSPDEEPESPTP--------APALRQISRRSSTRFNHHAQPSFD---GDESPTGNNSAA--GSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEP
        F +AEM P++E +SP P        AP+LRQISRR+STRFN    PS +    D SP  N++AA  G G RSLLRPQMSR  S RFS+ RSESF DLTEP
Subjt:  FPTAEMSPDEEPESPTP--------APALRQISRRSSTRFNHHAQPSFD---GDESPTGNNSAA--GSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEP

Query:  ASEGTRRLSTALAEERSMSVRETAAAQEAA-------ADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHG
        A EGTRRLS ALAEERSMS RE  AAQEAA        +E  E +EA ST AP+RMSLM+LLEETDRQMG EGS YRIE++E+EE +++++E E T V G
Subjt:  ASEGTRRLSTALAEERSMSVRETAAAQEAA-------ADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHG

Query:  GGGTGQT---CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        GGG G T   CCVCM RHKGAAFIPCGHTFCRLCS+EL V+RGNCPLCNG+ILEILDIF
Subjt:  GGGTGQT---CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

XP_008458019.1 PREDICTED: nucleolin-like [Cucumis melo]5.6e-12269.64Show/hide
Query:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAA
        MEGGRRRITLYDQMLAV +GR+L    TLNDVLTI KR+SPSPSPAVRL  RTLLDIIRDDVGKSP  NR+RKSWKFLRDRLRLNLRSQIPPP SL F  
Subjt:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAA

Query:  FPTAEMSPDEEPESPTP--------APALRQISRRSSTRFNHHAQPSFD---GDESPTGNNSAA--GSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEP
        F +A+M P++E +SP P        AP+LRQISRR+STRFN    PS +    D SP  N++AA  G+G RSLLRPQMSR  S RFS+ RSESF DLTEP
Subjt:  FPTAEMSPDEEPESPTP--------APALRQISRRSSTRFNHHAQPSFD---GDESPTGNNSAA--GSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEP

Query:  ASEGTRRLSTALAEERSMSVRETAAAQEAA-------ADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHG
        A EGTRRLS ALAEERSMS RE  AAQEAA        +E  E +EA ST AP+RMSLM+LLEETDRQMG EGS YRIE++E+EE +++++E E T V G
Subjt:  ASEGTRRLSTALAEERSMSVRETAAAQEAA-------ADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHG

Query:  GGGTGQT---CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        GGG G T   CCVCM RHKGAAFIPCGHTFCRLCS+EL V+RGNCPLCNG+ILEILDIF
Subjt:  GGGTGQT---CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

XP_022960262.1 chromo domain-containing protein cec-1-like [Cucurbita moschata]4.2e-11768.96Show/hide
Query:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPA-GNRDRKSWKFLRDRLRLNLRSQIPPPISLSFA
        MEGGRRRITLYDQMLAVG+GR+LTG LTLNDVLT+HKR+SP+PSP VRL  RTLLDI+RDDVGKSPA GNR+RKSWKFLRDRLRLNLRSQIPPP SL FA
Subjt:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPA-GNRDRKSWKFLRDRLRLNLRSQIPPPISLSFA

Query:  AFPTAEMSPDEE--PESPTP-----APALRQISRRSSTRFNHHAQPS---FDGDESPTGNNS------AAGSGSRSLLRPQMSRRKSKRFSIGRSESFED
         F +AEM+ +EE  PES TP      P LRQISRRSSTR + +   S    +  ESP  NNS           SRSLLRPQMSRR S R S+ RSESF D
Subjt:  AFPTAEMSPDEE--PESPTP-----APALRQISRRSSTRFNHHAQPS---FDGDESPTGNNS------AAGSGSRSLLRPQMSRRKSKRFSIGRSESFED

Query:  LTEPASEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEEANS--TAAPVRMSLMELLEETDRQMGVEGSRYRI----EEDEDEEVKQKDVE
        LTEP  EGTR LS ALA ERSMS RET A QEAA     ADED E  ++ +  TAAPVRMSLM+LLEETDRQMG EGSRY+I    EE+E+EE ++++ E
Subjt:  LTEPASEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEEANS--TAAPVRMSLMELLEETDRQMGVEGSRYRI----EEDEDEEVKQKDVE

Query:  EEATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        EE   V  GGG+ + CCVCM RHKGAAFIPCGHTFCRLCS+ELLV+RGNCPLCNG+ILEILDIF
Subjt:  EEATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

XP_023004831.1 nucleolin-like [Cucurbita maxima]4.2e-11769.06Show/hide
Query:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSP-AGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFA
        MEGGRRRITLYD+MLAVG+GR++TG LTLNDVLT+HKR+SP+PSP VRL  RTLLDI+RDDVGKSP AGNR+RKSWKFLRDRLRLNLRSQIPPP SL FA
Subjt:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSP-AGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFA

Query:  AFPTAEMSPDEE--PESPTP-----APALRQISRRSSTRFNHHAQPS---FDGDESPTGNNS---AAGSG---SRSLLRPQMSRRKSKRFSIGRSESFED
         F +AEM+ +EE  PES TP      P LRQISRR+STR + +   S    +  ESP  NNS    AG+G   SRSLLRPQMSRR S R S+ RSESF D
Subjt:  AFPTAEMSPDEE--PESPTP-----APALRQISRRSSTRFNHHAQPS---FDGDESPTGNNS---AAGSG---SRSLLRPQMSRRKSKRFSIGRSESFED

Query:  LTEPASEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEEANS--TAAPVRMSLMELLEETDRQMGVEGSRYRIEE--DEDEEVKQKDVEEE
        LTEP  EGTRRLS ALA ERSMS RET A QEAA     A+ED E  ++ +  TAAPVRMSLM+LLEETDRQMG EGSRY+IE+  +E+EE +++D E+E
Subjt:  LTEPASEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEEANS--TAAPVRMSLMELLEETDRQMGVEGSRYRIEE--DEDEEVKQKDVEEE

Query:  ATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
              GGG+ Q CCVCM RHKGAAFIPCGHTFCRLCS+ELLV+RGNCPLCNG+ILEILDIF
Subjt:  ATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

XP_023522866.1 chromo domain-containing protein cec-1-like [Cucurbita pepo subsp. pepo]1.3e-11870.25Show/hide
Query:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPA-GNRDRKSWKFLRDRLRLNLRSQIPPPISLSFA
        MEGGRRRITLYDQMLAVG GR+LTG LTLNDVLT+HKR+SP+PSP VRL  RTLLDI+RDDVGKSPA GNR+RKSWKFLRDRLRLNLRSQIPPP SL FA
Subjt:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPA-GNRDRKSWKFLRDRLRLNLRSQIPPPISLSFA

Query:  AFPTAEMSPDEE--PESPTP-----APALRQISRRSSTRFNHHAQPS---FDGDESPTGNNSA---AGSG---SRSLLRPQMSRRKSKRFSIGRSESFED
         F +AEM+ +EE  PES TP      P LRQISRRSSTR + +   S    +  ESP  N+SA   AG+G   SRSLLRPQMSRR S R S+ RSESF D
Subjt:  AFPTAEMSPDEE--PESPTP-----APALRQISRRSSTRFNHHAQPS---FDGDESPTGNNSA---AGSG---SRSLLRPQMSRRKSKRFSIGRSESFED

Query:  LTEPASEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEEANS--TAAPVRMSLMELLEETDRQMGVEGSRYRIE---EDEDEEVKQKDVEE
        LTEP  EGTRRLS ALA ERSMS RET A QEAA     ADED E  ++ +  TAAPVRMSLM+LLEETDRQMG EGSRY+IE   E+E+EE ++++ EE
Subjt:  LTEPASEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEEANS--TAAPVRMSLMELLEETDRQMGVEGSRYRIE---EDEDEEVKQKDVEE

Query:  EATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        E   V  GGG+ + CCVCM RHKGAAFIPCGHTFCRLCS+ELLV+RGNCPLCNG+ILEILDIF
Subjt:  EATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

TrEMBL top hitse value%identityAlignment
A0A0A0K6R9 RING-type domain-containing protein3.3e-11267.97Show/hide
Query:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAA
        MEGGRRRITLYDQMLAV +GRDL G  TLNDVL I KR+ PS SPAVRL  RTLLDIIRDDVGKSP  NR+R SWKF RDRLRL++RSQIPP  SL F  
Subjt:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAA

Query:  FPTAE-MSPDEEPESPT------PAPALRQISRRSSTRFNHHAQPSFD---GDESPTGNNSAA--GSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEPA
          +AE MS DE    PT       AP+LRQISRR+STR N   QPS +    + SP  N++AA  GSG RSLLRPQMSR  S RFS+ RSESF DLTEP 
Subjt:  FPTAE-MSPDEEPESPT------PAPALRQISRRSSTRFNHHAQPSFD---GDESPTGNNSAA--GSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEPA

Query:  SEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEE--ANSTAAPVRMSLMELLEETDRQMGVEGSRYRIE-EDEDEEVKQKDVEEEATAVHG
         EGTRRLS ALAEERSMS RE   AQEAA      DE+ + +E  A ST APVRMSLM+LLEETDRQMG EGS YRIE EDE+EE++     E +T V G
Subjt:  SEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEE--ANSTAAPVRMSLMELLEETDRQMGVEGSRYRIE-EDEDEEVKQKDVEEEATAVHG

Query:  GGGTGQT---CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        GGG+G T   CCVCM RHKGAAFIPCGHTFCRLCS+EL V+RGNCPLCNG+ILEILDIF
Subjt:  GGGTGQT---CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

A0A1S3C6E1 nucleolin-like2.7e-12269.64Show/hide
Query:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAA
        MEGGRRRITLYDQMLAV +GR+L    TLNDVLTI KR+SPSPSPAVRL  RTLLDIIRDDVGKSP  NR+RKSWKFLRDRLRLNLRSQIPPP SL F  
Subjt:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAA

Query:  FPTAEMSPDEEPESPTP--------APALRQISRRSSTRFNHHAQPSFD---GDESPTGNNSAA--GSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEP
        F +A+M P++E +SP P        AP+LRQISRR+STRFN    PS +    D SP  N++AA  G+G RSLLRPQMSR  S RFS+ RSESF DLTEP
Subjt:  FPTAEMSPDEEPESPTP--------APALRQISRRSSTRFNHHAQPSFD---GDESPTGNNSAA--GSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEP

Query:  ASEGTRRLSTALAEERSMSVRETAAAQEAA-------ADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHG
        A EGTRRLS ALAEERSMS RE  AAQEAA        +E  E +EA ST AP+RMSLM+LLEETDRQMG EGS YRIE++E+EE +++++E E T V G
Subjt:  ASEGTRRLSTALAEERSMSVRETAAAQEAA-------ADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHG

Query:  GGGTGQT---CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        GGG G T   CCVCM RHKGAAFIPCGHTFCRLCS+EL V+RGNCPLCNG+ILEILDIF
Subjt:  GGGTGQT---CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

A0A5D3E4J3 Nucleolin-like1.6e-12269.92Show/hide
Query:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAA
        MEGGRRRITLYDQMLAV +GR+L    TLNDVLTI KR+SPSPSPAVRL  RTLLDIIRDDVGKSP  NR+RKSWKFLRDRLRLNLRSQIPPP SL F  
Subjt:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAA

Query:  FPTAEMSPDEEPESPTP--------APALRQISRRSSTRFNHHAQPSFD---GDESPTGNNSAA--GSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEP
        F +AEM P++E +SP P        AP+LRQISRR+STRFN    PS +    D SP  N++AA  G G RSLLRPQMSR  S RFS+ RSESF DLTEP
Subjt:  FPTAEMSPDEEPESPTP--------APALRQISRRSSTRFNHHAQPSFD---GDESPTGNNSAA--GSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEP

Query:  ASEGTRRLSTALAEERSMSVRETAAAQEAA-------ADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHG
        A EGTRRLS ALAEERSMS RE  AAQEAA        +E  E +EA ST AP+RMSLM+LLEETDRQMG EGS YRIE++E+EE +++++E E T V G
Subjt:  ASEGTRRLSTALAEERSMSVRETAAAQEAA-------ADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHG

Query:  GGGTGQT---CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        GGG G T   CCVCM RHKGAAFIPCGHTFCRLCS+EL V+RGNCPLCNG+ILEILDIF
Subjt:  GGGTGQT---CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

A0A6J1H6Y3 chromo domain-containing protein cec-1-like2.0e-11768.96Show/hide
Query:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPA-GNRDRKSWKFLRDRLRLNLRSQIPPPISLSFA
        MEGGRRRITLYDQMLAVG+GR+LTG LTLNDVLT+HKR+SP+PSP VRL  RTLLDI+RDDVGKSPA GNR+RKSWKFLRDRLRLNLRSQIPPP SL FA
Subjt:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPA-GNRDRKSWKFLRDRLRLNLRSQIPPPISLSFA

Query:  AFPTAEMSPDEE--PESPTP-----APALRQISRRSSTRFNHHAQPS---FDGDESPTGNNS------AAGSGSRSLLRPQMSRRKSKRFSIGRSESFED
         F +AEM+ +EE  PES TP      P LRQISRRSSTR + +   S    +  ESP  NNS           SRSLLRPQMSRR S R S+ RSESF D
Subjt:  AFPTAEMSPDEE--PESPTP-----APALRQISRRSSTRFNHHAQPS---FDGDESPTGNNS------AAGSGSRSLLRPQMSRRKSKRFSIGRSESFED

Query:  LTEPASEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEEANS--TAAPVRMSLMELLEETDRQMGVEGSRYRI----EEDEDEEVKQKDVE
        LTEP  EGTR LS ALA ERSMS RET A QEAA     ADED E  ++ +  TAAPVRMSLM+LLEETDRQMG EGSRY+I    EE+E+EE ++++ E
Subjt:  LTEPASEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEEANS--TAAPVRMSLMELLEETDRQMGVEGSRYRI----EEDEDEEVKQKDVE

Query:  EEATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        EE   V  GGG+ + CCVCM RHKGAAFIPCGHTFCRLCS+ELLV+RGNCPLCNG+ILEILDIF
Subjt:  EEATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

A0A6J1KT79 nucleolin-like2.0e-11769.06Show/hide
Query:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSP-AGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFA
        MEGGRRRITLYD+MLAVG+GR++TG LTLNDVLT+HKR+SP+PSP VRL  RTLLDI+RDDVGKSP AGNR+RKSWKFLRDRLRLNLRSQIPPP SL FA
Subjt:  MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSP-AGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFA

Query:  AFPTAEMSPDEE--PESPTP-----APALRQISRRSSTRFNHHAQPS---FDGDESPTGNNS---AAGSG---SRSLLRPQMSRRKSKRFSIGRSESFED
         F +AEM+ +EE  PES TP      P LRQISRR+STR + +   S    +  ESP  NNS    AG+G   SRSLLRPQMSRR S R S+ RSESF D
Subjt:  AFPTAEMSPDEE--PESPTP-----APALRQISRRSSTRFNHHAQPS---FDGDESPTGNNS---AAGSG---SRSLLRPQMSRRKSKRFSIGRSESFED

Query:  LTEPASEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEEANS--TAAPVRMSLMELLEETDRQMGVEGSRYRIEE--DEDEEVKQKDVEEE
        LTEP  EGTRRLS ALA ERSMS RET A QEAA     A+ED E  ++ +  TAAPVRMSLM+LLEETDRQMG EGSRY+IE+  +E+EE +++D E+E
Subjt:  LTEPASEGTRRLSTALAEERSMSVRETAAAQEAA-----ADEDSEGEEANS--TAAPVRMSLMELLEETDRQMGVEGSRYRIEE--DEDEEVKQKDVEEE

Query:  ATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
              GGG+ Q CCVCM RHKGAAFIPCGHTFCRLCS+ELLV+RGNCPLCNG+ILEILDIF
Subjt:  ATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

SwissProt top hitse value%identityAlignment
P10862 Postreplication repair E3 ubiquitin-protein ligase RAD182.2e-0450Show/hide
Query:  CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLC
        C +C +  K     PCGHTFC LC +  L N+ NCPLC
Subjt:  CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLC

Q6FPI4 Postreplication repair E3 ubiquitin-protein ligase RAD183.8e-0447.37Show/hide
Query:  CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLC
        C +C +  K     PCGHTFC LC +  L N   CPLC
Subjt:  CCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLC

Arabidopsis top hitse value%identityAlignment
AT3G07120.1 RING/U-box superfamily protein1.3e-3938.27Show/hide
Query:  LNDVLTIHKRSSPSPSPAV-------RLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQ--------------IPPP--ISLSFAAFPTAE
        L   + I   S PSP P         R TS+TL DIIR++  K   G++DR +W+  R++LRL                   IP P  I  +F +     
Subjt:  LNDVLTIHKRSSPSPSPAV-------RLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQ--------------IPPP--ISLSFAAFPTAE

Query:  MSPD---EEPESPTPAPALR-QISRRSSTRFNHHAQPSFDGDESPTGNNSAAGSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEPASEGTRRLS-TALA
           D     P S  P  + R   +R SS R      P    D+SP  +    G  SRS  +PQ+SR  S R          D +E      RR       
Subjt:  MSPD---EEPESPTPAPALR-QISRRSSTRFNHHAQPSFDGDESPTGNNSAAGSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEPASEGTRRLS-TALA

Query:  EERSMSVRETAAAQEAA----------ADEDSEGEE----------ANSTAAPVR-MSLMELLEETDRQMGVEGSRYRIEEDED-EEVKQKDVEEEATAV
        EER MS RE  AAQEAA           DED + EE          ++S + P + MSLM+LLEETDRQMG+ GSRY ++EDE+ EE ++ +  EE    
Subjt:  EERSMSVRETAAAQEAA----------ADEDSEGEE----------ANSTAAPVR-MSLMELLEETDRQMGVEGSRYRIEEDED-EEVKQKDVEEEATAV

Query:  HGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        HGGG    +CCVCM + KGA+F PCGHTFC+LCSKEL+  +G+CP+C+ ++LE L+IF
Subjt:  HGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

AT3G25030.1 RING/U-box superfamily protein1.1e-3034.69Show/hide
Query:  MEGG-RRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHK-RSSP---SPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPIS
        M+GG R R+TL D+M  V + R     LTL  +L   K R+SP   SP P+   ++R+L+++++    +    +RD+ +WK LR++LRL     +     
Subjt:  MEGG-RRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHK-RSSP---SPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPIS

Query:  LSFAAFPTAEMSPDEEPESPTPAPALRQISRRSSTRFNHHAQPSFDGDESPTGNNSAAGSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEPAS--EGTR
                  +S +  P   TP P    +S +                 S +GN                                  +TE AS  EG  
Subjt:  LSFAAFPTAEMSPDEEPESPTPAPALRQISRRSSTRFNHHAQPSFDGDESPTGNNSAAGSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEPAS--EGTR

Query:  RLSTALAEERSMSVRETAAAQEAAADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHGGGGTGQTCCVCME
        RL   LAEER++S RE    +E  A+ + E         P RMSLMELLEE + QM    S   ++ + +EEV      E             +CCVCM 
Subjt:  RLSTALAEERSMSVRETAAAQEAAADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHGGGGTGQTCCVCME

Query:  RHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        R KGAAFIPCGHTFCRLCS+EL V RGNCPLCN  ILE+LD+F
Subjt:  RHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

AT3G25030.2 RING/U-box superfamily protein1.1e-3034.69Show/hide
Query:  MEGG-RRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHK-RSSP---SPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPIS
        M+GG R R+TL D+M  V + R     LTL  +L   K R+SP   SP P+   ++R+L+++++    +    +RD+ +WK LR++LRL     +     
Subjt:  MEGG-RRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHK-RSSP---SPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPIS

Query:  LSFAAFPTAEMSPDEEPESPTPAPALRQISRRSSTRFNHHAQPSFDGDESPTGNNSAAGSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEPAS--EGTR
                  +S +  P   TP P    +S +                 S +GN                                  +TE AS  EG  
Subjt:  LSFAAFPTAEMSPDEEPESPTPAPALRQISRRSSTRFNHHAQPSFDGDESPTGNNSAAGSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEPAS--EGTR

Query:  RLSTALAEERSMSVRETAAAQEAAADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHGGGGTGQTCCVCME
        RL   LAEER++S RE    +E  A+ + E         P RMSLMELLEE + QM    S   ++ + +EEV      E             +CCVCM 
Subjt:  RLSTALAEERSMSVRETAAAQEAAADEDSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHGGGGTGQTCCVCME

Query:  RHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        R KGAAFIPCGHTFCRLCS+EL V RGNCPLCN  ILE+LD+F
Subjt:  RHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

AT4G13100.2 RING/U-box superfamily protein3.4e-2449.65Show/hide
Query:  ERSMSVRETAAAQEAAADEDSE---GEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEE---EATAVHGGGGTGQTCCVCMERH
        E + S R+ + A E AA+ +     G    +   P RMSLMELLE+ D      G  Y +   ++ EV+ +D  +   EA AV G    G  CCVCM R 
Subjt:  ERSMSVRETAAAQEAAADEDSE---GEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEE---EATAVHGGGGTGQTCCVCMERH

Query:  KGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        KGAAFIPCGHTFCRLCS+EL V RGNCPLCN  IL++LDIF
Subjt:  KGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF

AT4G13100.3 RING/U-box superfamily protein3.4e-2449.65Show/hide
Query:  ERSMSVRETAAAQEAAADEDSE---GEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEE---EATAVHGGGGTGQTCCVCMERH
        E + S R+ + A E AA+ +     G    +   P RMSLMELLE+ D      G  Y +   ++ EV+ +D  +   EA AV G    G  CCVCM R 
Subjt:  ERSMSVRETAAAQEAAADEDSE---GEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEE---EATAVHGGGGTGQTCCVCMERH

Query:  KGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF
        KGAAFIPCGHTFCRLCS+EL V RGNCPLCN  IL++LDIF
Subjt:  KGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYILEILDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTGGTCGCCGGAGAATTACGCTTTACGATCAGATGTTAGCGGTCGGCAACGGTAGAGATCTCACCGGAAGTTTGACGCTGAACGACGTTTTAACCATTCACAA
GAGATCCTCGCCGAGCCCCTCGCCGGCGGTGAGACTAACCAGCCGGACTTTGCTTGATATCATAAGAGACGACGTCGGAAAATCCCCCGCCGGCAACAGAGACAGGAAAT
CTTGGAAGTTCTTGAGAGATCGCCTCCGTTTGAATCTCAGATCTCAAATTCCGCCGCCGATTTCGCTAAGTTTCGCCGCTTTTCCGACGGCGGAGATGTCGCCGGACGAA
GAACCGGAATCTCCCACCCCTGCCCCGGCTCTCCGGCAGATCTCACGGCGGAGTTCGACGCGGTTCAACCATCACGCGCAGCCGTCTTTCGACGGCGACGAGTCGCCGAC
GGGCAACAACTCCGCCGCCGGAAGCGGCAGCCGGAGTCTCCTCCGGCCGCAAATGTCGCGGCGCAAGTCTAAGAGATTCTCCATTGGGCGGAGCGAGAGTTTCGAGGACT
TGACGGAGCCGGCGAGTGAGGGCACGCGCCGCCTCTCCACGGCGCTGGCGGAGGAGAGATCGATGTCGGTGAGAGAAACGGCGGCGGCCCAAGAAGCCGCCGCCGACGAA
GACTCAGAAGGAGAAGAGGCGAATTCGACGGCGGCGCCGGTGAGAATGTCACTGATGGAACTCCTAGAAGAGACGGACAGGCAAATGGGGGTCGAAGGGTCACGATACAG
AATAGAAGAAGACGAAGATGAAGAAGTAAAACAGAAGGATGTAGAAGAAGAAGCCACCGCCGTACACGGCGGCGGTGGGACGGGACAAACCTGCTGCGTGTGTATGGAGC
GTCATAAGGGCGCGGCTTTTATCCCGTGCGGTCACACCTTTTGTAGGCTCTGTTCGAAAGAACTTTTGGTCAACAGAGGGAACTGTCCACTTTGCAATGGCTACATTTTG
GAGATTCTTGATATCTTCTAA
mRNA sequenceShow/hide mRNA sequence
CTTGAATCCCTCCATTTCATCATCTTCCTCTCTCTTTTTTCTTGACATTCTAAAAACAAATTGGGAAAATAATTTGAAGAATTTTCCGTCGTTTTATTTGTTGTGGGTCT
GTGTTGGATCTGTTAAACGGATTCTCGATGCTTCCATTTTTTGGAATTGAAACGAATTTCAATTATTGTTGAAGATTTTGGGGTTTTTTTTTTTTTTGTATAATTGATTT
CTGTGATTATCAATGGAAGGTGGTCGCCGGAGAATTACGCTTTACGATCAGATGTTAGCGGTCGGCAACGGTAGAGATCTCACCGGAAGTTTGACGCTGAACGACGTTTT
AACCATTCACAAGAGATCCTCGCCGAGCCCCTCGCCGGCGGTGAGACTAACCAGCCGGACTTTGCTTGATATCATAAGAGACGACGTCGGAAAATCCCCCGCCGGCAACA
GAGACAGGAAATCTTGGAAGTTCTTGAGAGATCGCCTCCGTTTGAATCTCAGATCTCAAATTCCGCCGCCGATTTCGCTAAGTTTCGCCGCTTTTCCGACGGCGGAGATG
TCGCCGGACGAAGAACCGGAATCTCCCACCCCTGCCCCGGCTCTCCGGCAGATCTCACGGCGGAGTTCGACGCGGTTCAACCATCACGCGCAGCCGTCTTTCGACGGCGA
CGAGTCGCCGACGGGCAACAACTCCGCCGCCGGAAGCGGCAGCCGGAGTCTCCTCCGGCCGCAAATGTCGCGGCGCAAGTCTAAGAGATTCTCCATTGGGCGGAGCGAGA
GTTTCGAGGACTTGACGGAGCCGGCGAGTGAGGGCACGCGCCGCCTCTCCACGGCGCTGGCGGAGGAGAGATCGATGTCGGTGAGAGAAACGGCGGCGGCCCAAGAAGCC
GCCGCCGACGAAGACTCAGAAGGAGAAGAGGCGAATTCGACGGCGGCGCCGGTGAGAATGTCACTGATGGAACTCCTAGAAGAGACGGACAGGCAAATGGGGGTCGAAGG
GTCACGATACAGAATAGAAGAAGACGAAGATGAAGAAGTAAAACAGAAGGATGTAGAAGAAGAAGCCACCGCCGTACACGGCGGCGGTGGGACGGGACAAACCTGCTGCG
TGTGTATGGAGCGTCATAAGGGCGCGGCTTTTATCCCGTGCGGTCACACCTTTTGTAGGCTCTGTTCGAAAGAACTTTTGGTCAACAGAGGGAACTGTCCACTTTGCAAT
GGCTACATTTTGGAGATTCTTGATATCTTCTAATTTTGTCAATCTTAGATTCAAACTTTGGATTTAAATGAAAATTAAACTTTTTTTCAACTTGTTACAATTTTATTTTT
CCTTTATATGGC
Protein sequenceShow/hide protein sequence
MEGGRRRITLYDQMLAVGNGRDLTGSLTLNDVLTIHKRSSPSPSPAVRLTSRTLLDIIRDDVGKSPAGNRDRKSWKFLRDRLRLNLRSQIPPPISLSFAAFPTAEMSPDE
EPESPTPAPALRQISRRSSTRFNHHAQPSFDGDESPTGNNSAAGSGSRSLLRPQMSRRKSKRFSIGRSESFEDLTEPASEGTRRLSTALAEERSMSVRETAAAQEAAADE
DSEGEEANSTAAPVRMSLMELLEETDRQMGVEGSRYRIEEDEDEEVKQKDVEEEATAVHGGGGTGQTCCVCMERHKGAAFIPCGHTFCRLCSKELLVNRGNCPLCNGYIL
EILDIF