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Sed0022240 (gene) of Chayote v1 genome

Gene IDSed0022240
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:1726266..1741351
RNA-Seq ExpressionSed0022240
SyntenySed0022240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049081.1 hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa]4.3e-2477.27Show/hide
Query:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPV
        MD TVPGR+A EEVTRESLI+ISY EPE  LSS   S KLSSENINL NG +HN V GKEYDG+EK+RSELIAISFLES PE GSVPV
Subjt:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPV

KAG6582528.1 hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2478.26Show/hide
Query:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELK
        MD TVPG +  EEVTRESLIAISY EPE  LSS   SGKLSSEN+NLVNG DHNLV GKEYD  EKYRSELIAISFLES PEIGS  V ELK
Subjt:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELK

KAG7018913.1 hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-2478.26Show/hide
Query:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELK
        MD TVPG +  EEVTRESLIAISY EPE  LSS   SGKLSSEN+NLVNG DHNLV GKEYD  EKYRSELIAISFLES PEIGS  V ELK
Subjt:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELK

KGN56651.1 hypothetical protein Csa_009703 [Cucumis sativus]5.9e-2675.27Show/hide
Query:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELKG
        MDTTVPGR+A EEVTRESLI+ISY EPE  LSS   S K+S ENINL NG +HN + GKEYDG+EK+RSELIAISFLES PE GSVPV ELKG
Subjt:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELKG

XP_022974968.1 uncharacterized protein LOC111473815 [Cucurbita maxima]1.8e-2272.04Show/hide
Query:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELKG
        MD TVPG++ SEEVTRESLIAISYSEPE+ LSS   SGKL+S+N+        NLV GKE+D +EKYRSELIAISFLES PEIGSVPVG+LKG
Subjt:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELKG

TrEMBL top hitse value%identityAlignment
A0A0A0L967 Uncharacterized protein2.9e-2675.27Show/hide
Query:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELKG
        MDTTVPGR+A EEVTRESLI+ISY EPE  LSS   S K+S ENINL NG +HN + GKEYDG+EK+RSELIAISFLES PE GSVPV ELKG
Subjt:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELKG

A0A5A7U641 Uncharacterized protein2.1e-2477.27Show/hide
Query:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPV
        MD TVPGR+A EEVTRESLI+ISY EPE  LSS   S KLSSENINL NG +HN V GKEYDG+EK+RSELIAISFLES PE GSVPV
Subjt:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPV

A0A6J1HHB9 uncharacterized protein LOC1114632631.9e-2270.97Show/hide
Query:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELKG
        MD TVPG++ SEEVTRESLIAISYSEPE+ LSS   SGKL+S+N+        NLV GKE+D +EKYRSELI+ISFLES PEIGSVPVG+LKG
Subjt:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELKG

A0A6J1IHW2 uncharacterized protein LOC1114738158.6e-2372.04Show/hide
Query:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELKG
        MD TVPG++ SEEVTRESLIAISYSEPE+ LSS   SGKL+S+N+        NLV GKE+D +EKYRSELIAISFLES PEIGSVPVG+LKG
Subjt:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPH-SGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLES-PEIGSVPVGELKG

W9RTT6 Uncharacterized protein1.8e-1253.19Show/hide
Query:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSS-PHSGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLESPEIGSVPV---GELK
        MD T P +   EEVTRESLI+ISYS PE  L+S P S KL+ E          NLV G + DGE+K+RSELI+IS+ +SP++G +PV   GELK
Subjt:  MDTTVPGRSASEEVTRESLIAISYSEPEADLSS-PHSGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLESPEIGSVPV---GELK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACAACAGTACCTGGAAGGAGTGCTTCGGAGGAAGTGACTCGTGAGTCGCTTATTGCCATTTCTTACTCGGAACCAGAAGCAGACCTCTCTTCACCGCACTCTGG
AAAGCTTAGTAGCGAGAACATCAATCTGGTCAACGGGACAGACCACAATCTGGTGAACGGGAAAGAATACGATGGAGAAGAGAAATATAGATCTGAGCTGATTGCTATTT
CTTTCCTCGAGTCACCTGAAATCGGAAGTGTACCTGTGGGCGAACTCAAGGGTTAG
mRNA sequenceShow/hide mRNA sequence
CGCATTACCCGCTCTCTCTAGGTATGTCGCCTCTTCCTTTGAATTTTTCTTCGTTTTTTTCTCCTTTTTCGCTTTGATCGATTATTTCTCTGTTCTGTTTTTCACCGATA
CGAGTTTAATTTTCGTATAATCTGTTCATGATCTATTGATTTTGTTTTTGACGGTTTTGGTAAGAAATTCACGATTCGCTTTAATCGCGAAAGGACATGGAATTCATCGT
CAATCAAAAGTCAATTTCTCTGACAATCTGTTCATGAACTATTGATTTTGATTAATCGCTGTCAAGATTTGAAACCGGGGAATTCAAATTTGAGCTTCTAGTCGATCGGC
AGGGTCTTGGGATTTAGGATTTGGAGATGTTATGGAGAACACAAAACAGACTGCCATTATATGGATACAACAGTACCTGGAAGGAGTGCTTCGGAGGAAGTGACTCGTGA
GTCGCTTATTGCCATTTCTTACTCGGAACCAGAAGCAGACCTCTCTTCACCGCACTCTGGAAAGCTTAGTAGCGAGAACATCAATCTGGTCAACGGGACAGACCACAATC
TGGTGAACGGGAAAGAATACGATGGAGAAGAGAAATATAGATCTGAGCTGATTGCTATTTCTTTCCTCGAGTCACCTGAAATCGGAAGTGTACCTGTGGGCGAACTCAAG
GGTTAGTGCCTCGACGTCCATTATCATAATTGTATGCGTTTTTACGTAAAAAGGATGCTAGTCTAAGTTCATGGACGTGTTTTTGCGACGTATGCAATGCTGTACATGTT
CTTTGTTCTTGTAACATAGACTCTAGCATGGGTTGTGAGTACTATATTGTTGAAACTTATTGGTGTGTGAGCCCAATGAATGAACTTAATTATGAACCCTTAGTACTCAG
CTTTCTTCTTTTACATATTTGTCACTTTTAATGTAATATCATAACACGATACATTAGTTATTGTATATATACACGTATGTAACACATTGTATGATAACTTTGAACCAATT
ATTTGTTTAGTGTAGTTTATATAGATGAGATATTTGACGTCTA
Protein sequenceShow/hide protein sequence
MDTTVPGRSASEEVTRESLIAISYSEPEADLSSPHSGKLSSENINLVNGTDHNLVNGKEYDGEEKYRSELIAISFLESPEIGSVPVGELKG