; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0022278 (gene) of Chayote v1 genome

Gene IDSed0022278
OrganismSechium edule (Chayote v1)
DescriptionLEA_2 domain-containing protein
Genome locationLG04:37198695..37201339
RNA-Seq ExpressionSed0022278
SyntenySed0022278
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575419.1 hypothetical protein SDJN03_26058, partial [Cucurbita argyrosperma subsp. sororia]8.1e-8572.29Show/hide
Query:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI
        MDVL       N FCC QI TLYTLKR C+FLLF+ LF IIA+AIAALPVIFLLKPR+P+F+L SL+LDWYN+S+ S SP +SSVFTL L SQNPNK GI
Subjt:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI

Query:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI
        KYS SRLL+I +GN ++GTIRVPEVFQPARS DRSVRTRL+LHRF+V+LFD   E V MKIIGDVGVELFVLHMAV+KMKVALNCNVDV + GLNF++E+
Subjt:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI

Query:  LFNGGTVLKALESFPSNSKTMFTNCEISFYL
        L NG TV KAL+SFPSNS T  T C ++FYL
Subjt:  LFNGGTVLKALESFPSNSKTMFTNCEISFYL

KAG7013960.1 hypothetical protein SDJN02_24129 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-8471.86Show/hide
Query:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI
        MDVL       N FCC QI TLYTLKR C+FLLF+ LF IIA+AIAALPVIFLLKPR+P+F+L SL+LDWYN+S+ S SP +SSVFTL L SQNPNK GI
Subjt:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI

Query:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI
        KYS SRLL+I +GN ++GTIRVPEVFQPARS DRSVRTRL+LHRF+V+LF+   E V MKIIGDVGVELFVLHMAV+KMKVALNCNVDV + GLNF++E+
Subjt:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI

Query:  LFNGGTVLKALESFPSNSKTMFTNCEISFYL
        L NG TV KAL+SFPSNS T  T C ++FYL
Subjt:  LFNGGTVLKALESFPSNSKTMFTNCEISFYL

XP_022953801.1 uncharacterized protein LOC111456218 isoform X1 [Cucurbita moschata]4.8e-8574.77Show/hide
Query:  FCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEG
        FCC QI TLYTLKR C+FLLF+ LF IIA+AIAALPVIFLLKPR+P+F+L SL+LDWYN+S+ S SP +SSVFTL LNS+NPNK GIKYS SRLL+I +G
Subjt:  FCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEG

Query:  NVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEILFNGGTVLKALES
        N ++GTIRVPEVFQPARS DRSVRTRL+LHRF+V+LFD   E V MKIIGDVGVELFVLHMAV+KMKVALNCNVDV + GLNFR+++L NG TV KAL+S
Subjt:  NVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEILFNGGTVLKALES

Query:  FPSNSKTMFTNCEISFYL
        FPSNS T  TNC ++FYL
Subjt:  FPSNSKTMFTNCEISFYL

XP_022992383.1 uncharacterized protein LOC111488707 isoform X1 [Cucurbita maxima]4.3e-8672.73Show/hide
Query:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI
        MDVL       N FCC QI TLYTLKR C+FLLF+ LF IIA+AIAALPVIFLLKPR+P+F+L SL+LDWYN+S+ SGSP +SSVFTL L SQNPNK GI
Subjt:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI

Query:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI
        KYS SRLL+I +GN ++GTIRVPEVFQPARS DRSVRTRL+LHRF+V+LFD   E V MKIIGD+GVELFVLHMAV+KMKVALNCNVDV + GLNFR+++
Subjt:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI

Query:  LFNGGTVLKALESFPSNSKTMFTNCEISFYL
        L NG TV KAL+SFPSNS T  TNC ++FYL
Subjt:  LFNGGTVLKALESFPSNSKTMFTNCEISFYL

XP_023548218.1 uncharacterized protein LOC111806923 [Cucurbita pepo subsp. pepo]2.1e-8572.29Show/hide
Query:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI
        MDVL       N FCC QI TLYTLKR C+FLLF+ LF IIA+AIAALPVIFLLKPR+P+F+L SL+LDWYN+S+ S SP +SSVFTL LNS+NPNK GI
Subjt:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI

Query:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI
        KYS SRLL+I +GN ++GTIRVPEVFQPARS DRSVRTRL+LHRF+V+LFD   E V MKIIGDVGVELFVLHMAV+KMKVALNCNVDV + GLNFR+++
Subjt:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI

Query:  LFNGGTVLKALESFPSNSKTMFTNCEISFYL
        L NG TV KAL+SFPSN+ T  TNC ++FYL
Subjt:  LFNGGTVLKALESFPSNSKTMFTNCEISFYL

TrEMBL top hitse value%identityAlignment
A0A0A0K6V0 Uncharacterized protein8.2e-8373.85Show/hide
Query:  FCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEG
        FCC+QI TLYTLKR C FLLFL +F IIA+AIAALPVIFLLKPREP+F+L+S++LDWYN++IRSGSP+LSSVFTL LNSQNPNK GIKYS SRLL+I + 
Subjt:  FCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEG

Query:  NVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEILFNGGTVLKALES
        + V+GTIRVPEVFQPARSG+R VRTRL+LH+ DV+L +T RE V MKIIGDVGVELFVLHM V+KMKVAL C+VD+D+  LNFR+EIL NG +V KAL+S
Subjt:  NVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEILFNGGTVLKALES

Query:  FPSNSKTMFTNCEISFYL
         PSNSKTM + C I+FYL
Subjt:  FPSNSKTMFTNCEISFYL

A0A1S3CGG7 uncharacterized protein LOC1035006531.1e-8272.94Show/hide
Query:  FCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEG
        FCC+QI TLYTLKR C+FLLF  +F IIA+AIAALPVIFLLKPREP+F+L S++LDWYN+++RSGSP+LSSVFTL LNSQNPNK GIKYS SRLL+I +G
Subjt:  FCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEG

Query:  NVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEILFNGGTVLKALES
        + ++GTIRVPEVFQPARSG+R VRTRL+LH+ DV+L +TMRE V MKIIGDVGVELFVLHM V+KMKVAL C+VDVD+  LN R+EIL NG +V KAL+S
Subjt:  NVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEILFNGGTVLKALES

Query:  FPSNSKTMFTNCEISFYL
         PSNSKTM + C ++FYL
Subjt:  FPSNSKTMFTNCEISFYL

A0A6J1CZI3 uncharacterized protein LOC111015690 isoform X27.7e-8170.26Show/hide
Query:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI
        MDVL       N FCCQQI T+YTLKR CIFLLF+ +F +IAV IAALPVI LLKPREP+F+L SL+LDWYN+S++SGS  +SSVFTL LNSQNPN+  I
Subjt:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI

Query:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI
        KYS SRLLVI +GN V+GTIRVPEVFQPARS DRSVRTRL+LHRF+V+LFD  RE   +K++GDVGVEL VLHMAV+KMKVALNC+V V++  LNFR+E+
Subjt:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI

Query:  LFNG-GTVLKALESFPSNSKTMFTNCEISFYL
        L NG GT+ KAL SF SNS+TM TNC I+FYL
Subjt:  LFNG-GTVLKALESFPSNSKTMFTNCEISFYL

A0A6J1GP37 uncharacterized protein LOC111456218 isoform X12.3e-8574.77Show/hide
Query:  FCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEG
        FCC QI TLYTLKR C+FLLF+ LF IIA+AIAALPVIFLLKPR+P+F+L SL+LDWYN+S+ S SP +SSVFTL LNS+NPNK GIKYS SRLL+I +G
Subjt:  FCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEG

Query:  NVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEILFNGGTVLKALES
        N ++GTIRVPEVFQPARS DRSVRTRL+LHRF+V+LFD   E V MKIIGDVGVELFVLHMAV+KMKVALNCNVDV + GLNFR+++L NG TV KAL+S
Subjt:  NVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEILFNGGTVLKALES

Query:  FPSNSKTMFTNCEISFYL
        FPSNS T  TNC ++FYL
Subjt:  FPSNSKTMFTNCEISFYL

A0A6J1JZ17 uncharacterized protein LOC111488707 isoform X12.1e-8672.73Show/hide
Query:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI
        MDVL       N FCC QI TLYTLKR C+FLLF+ LF IIA+AIAALPVIFLLKPR+P+F+L SL+LDWYN+S+ SGSP +SSVFTL L SQNPNK GI
Subjt:  MDVL-------NPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGI

Query:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI
        KYS SRLL+I +GN ++GTIRVPEVFQPARS DRSVRTRL+LHRF+V+LFD   E V MKIIGD+GVELFVLHMAV+KMKVALNCNVDV + GLNFR+++
Subjt:  KYSSSRLLVICEGNVVVGTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEI

Query:  LFNGGTVLKALESFPSNSKTMFTNCEISFYL
        L NG TV KAL+SFPSNS T  TNC ++FYL
Subjt:  LFNGGTVLKALESFPSNSKTMFTNCEISFYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G44380.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.3e-0533.33Show/hide
Query:  AVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEGNVVVGTIRVPEVFQPARS
        A +  A   +   KP++P F L S+ L     S++   PVL +   L ++  NPN   I YSS+++ ++ +G  V+G+  V    QPARS
Subjt:  AVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEGNVVVGTIRVPEVFQPARS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTCTTAATCCTTTTTGCTGCCAACAAATCTTTACACTTTACACTCTAAAACGACTCTGCATTTTCCTTCTCTTTCTCACTTTGTTCTTCATCATCGCGGTTGC
GATCGCCGCACTGCCCGTAATTTTCCTGTTAAAGCCTCGAGAGCCAGTTTTTACTCTCAATTCATTGCAACTGGATTGGTACAATGTTAGTATTAGATCTGGCTCTCCAG
TTTTGTCTTCGGTTTTCACTTTGAATCTCAATTCTCAAAATCCTAACAAATTCGGCATTAAGTATAGTTCGTCGAGGCTTCTCGTGATCTGCGAGGGAAATGTTGTGGTT
GGAACAATTCGAGTCCCTGAAGTGTTCCAACCTGCTCGTAGTGGGGATCGGAGTGTTCGAACTCGTCTGATGTTGCATCGATTCGATGTCAATTTGTTCGATACGATGAG
GGAGTCTGTTGCGATGAAGATTATTGGTGATGTTGGTGTAGAGCTGTTTGTGCTTCATATGGCTGTGGTAAAGATGAAGGTTGCTCTGAATTGCAATGTGGATGTTGATT
GGAGTGGGCTTAATTTCAGAGATGAAATACTTTTCAATGGAGGGACTGTACTAAAAGCTTTGGAATCATTTCCTTCCAACTCCAAGACAATGTTCACAAACTGTGAGATC
TCTTTTTACTTATGA
mRNA sequenceShow/hide mRNA sequence
GTTTTAGAATCTTAAGAAAGAAATCAAATTCAAATTTCTTGATTTAATCTGTGTTCTTTGTGTCCCCAAAATGTACATCCATTTCAATGGATGTTCTTAATCCTTTTTGC
TGCCAACAAATCTTTACACTTTACACTCTAAAACGACTCTGCATTTTCCTTCTCTTTCTCACTTTGTTCTTCATCATCGCGGTTGCGATCGCCGCACTGCCCGTAATTTT
CCTGTTAAAGCCTCGAGAGCCAGTTTTTACTCTCAATTCATTGCAACTGGATTGGTACAATGTTAGTATTAGATCTGGCTCTCCAGTTTTGTCTTCGGTTTTCACTTTGA
ATCTCAATTCTCAAAATCCTAACAAATTCGGCATTAAGTATAGTTCGTCGAGGCTTCTCGTGATCTGCGAGGGAAATGTTGTGGTTGGAACAATTCGAGTCCCTGAAGTG
TTCCAACCTGCTCGTAGTGGGGATCGGAGTGTTCGAACTCGTCTGATGTTGCATCGATTCGATGTCAATTTGTTCGATACGATGAGGGAGTCTGTTGCGATGAAGATTAT
TGGTGATGTTGGTGTAGAGCTGTTTGTGCTTCATATGGCTGTGGTAAAGATGAAGGTTGCTCTGAATTGCAATGTGGATGTTGATTGGAGTGGGCTTAATTTCAGAGATG
AAATACTTTTCAATGGAGGGACTGTACTAAAAGCTTTGGAATCATTTCCTTCCAACTCCAAGACAATGTTCACAAACTGTGAGATCTCTTTTTACTTATGAAG
Protein sequenceShow/hide protein sequence
MDVLNPFCCQQIFTLYTLKRLCIFLLFLTLFFIIAVAIAALPVIFLLKPREPVFTLNSLQLDWYNVSIRSGSPVLSSVFTLNLNSQNPNKFGIKYSSSRLLVICEGNVVV
GTIRVPEVFQPARSGDRSVRTRLMLHRFDVNLFDTMRESVAMKIIGDVGVELFVLHMAVVKMKVALNCNVDVDWSGLNFRDEILFNGGTVLKALESFPSNSKTMFTNCEI
SFYL