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Sed0022287 (gene) of Chayote v1 genome

Gene IDSed0022287
OrganismSechium edule (Chayote v1)
Descriptionprotein SAMBA-like isoform X2
Genome locationLG01:70102551..70106205
RNA-Seq ExpressionSed0022287
SyntenySed0022287
Gene Ontology termsGO:0046621 - negative regulation of organ growth (biological process)
GO:0010997 - anaphase-promoting complex binding (molecular function)
InterPro domainsIPR037547 - Protein SAMBA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136198.1 protein SAMBA isoform X2 [Cucumis sativus]1.2e-3886.6Show/hide
Query:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
        MN+ SPA+SS+STTAVAGRC+TNAA+S+DDFRFP+NLIS+P RKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGG FLKKTE +
Subjt:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
XP_008466003.1 PREDICTED: uncharacterized protein LOC103503566 isoform X2 [Cucumis melo]7.6e-3885.57Show/hide
Query:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
        MN+ SPA+SS STTAVAGRC+TNAA+S+DDFRFP+NLIS+P RKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGG FLKKT+ +
Subjt:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
XP_022131248.1 protein SAMBA isoform X2 [Momordica charantia]8.2e-4091.75Show/hide
Query:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
        MNSSSPA+SSISTTAVAGRC+TNAAMSVDDFRFPANLISIP RKDEAM+ALKSNIMAALNKEVKSLDDD+WMFEGPRSRINLMSRQGG FLKKTE +
Subjt:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
XP_022149251.1 protein SAMBA-like isoform X2 [Momordica charantia]3.7e-4091.75Show/hide
Query:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
        MNSSSPA+SSISTTAVAGRC+TNAAMSVDDFRFPANLISIP RKDE M+ALKSNIMAALNKEVKSLDDDNWMFEGPRS INLMSRQGGPFLKKTE +
Subjt:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
XP_038888368.1 protein SAMBA isoform X2 [Benincasa hispida]1.8e-3989.69Show/hide
Query:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
        MN+SSPA+SSISTTAVAGRC+TNAAMS+DDFRFPANLIS+P RKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMS+QGG FLKKTE +
Subjt:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
TrEMBL top hitse value%identityAlignment
A0A0A0LK11 Uncharacterized protein5.7e-3986.6Show/hide
Query:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
        MN+ SPA+SS+STTAVAGRC+TNAA+S+DDFRFP+NLIS+P RKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGG FLKKTE +
Subjt:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
A0A1S3CQ76 uncharacterized protein LOC103503566 isoform X23.7e-3885.57Show/hide
Query:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
        MN+ SPA+SS STTAVAGRC+TNAA+S+DDFRFP+NLIS+P RKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGG FLKKT+ +
Subjt:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
A0A6J1BQF8 protein SAMBA isoform X12.4e-3780.36Show/hide
Query:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGG-----PF-----
        MNSSSPA+SSISTTAVAGRC+TNAAMSVDDFRFPANLISIP RKDEAM+ALKSNIMAALNKEVKSLDDD+WMFEGPRSRINLMSRQG      P+     
Subjt:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGG-----PF-----

Query:  LKKTERRENNGS
         K+ +RRE+NGS
Subjt:  LKKTERRENNGS
A0A6J1BST3 protein SAMBA isoform X24.0e-4091.75Show/hide
Query:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
        MNSSSPA+SSISTTAVAGRC+TNAAMSVDDFRFPANLISIP RKDEAM+ALKSNIMAALNKEVKSLDDD+WMFEGPRSRINLMSRQGG FLKKTE +
Subjt:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
A0A6J1D7T9 protein SAMBA-like isoform X21.8e-4091.75Show/hide
Query:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
        MNSSSPA+SSISTTAVAGRC+TNAAMSVDDFRFPANLISIP RKDE M+ALKSNIMAALNKEVKSLDDDNWMFEGPRS INLMSRQGGPFLKKTE +
Subjt:  MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERR
SwissProt top hitse value%identityAlignment
Q9C613 Protein SAMBA2.1e-2260.64Show/hide
Query:  MNSSSPAHSSISTTAVA-GRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKK
        MN +SPAHS +STTAVA G  ++ AA  +DDF FP ++ S+  RKDEAM  LK+++M  L+KEVKSL++D+WMFEGPRSRI+L+SR+G  FLKK
Subjt:  MNSSSPAHSSISTTAVA-GRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKK
Arabidopsis top hitse value%identityAlignment
AT1G32310.1 unknown protein1.5e-2360.64Show/hide
Query:  MNSSSPAHSSISTTAVA-GRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKK
        MN +SPAHS +STTAVA G  ++ AA  +DDF FP ++ S+  RKDEAM  LK+++M  L+KEVKSL++D+WMFEGPRSRI+L+SR+G  FLKK
Subjt:  MNSSSPAHSSISTTAVA-GRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGCTCGTCGCCTGCTCATTCTTCCATTTCCACCACCGCCGTCGCCGGAAGATGTGCCACAAACGCCGCTATGTCCGTCGACGATTTTCGTTTTCCCGCCAATTT
GATATCTATTCCAGGGCGCAAGGATGAGGCCATGACTGCTCTTAAATCTAATATAATGGCTGCTCTGAACAAGGAGGTCAAATCCCTGGATGATGATAACTGGATGTTTG
AAGGTCCTCGCTCCCGTATCAACCTTATGTCTCGACAAGGTGGCCCTTTCCTAAAAAAGACAGAGAGAAGAGAAAATAATGGGTCGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTCTAGGGTTTAGTTCATCAGAAAATTGGGAACGCCATGAATAGCTCGTCGCCTGCTCATTCTTCCATTTCCACCACCGCCGTCGCCGGAAGATGTGCCACAAACGCC
GCTATGTCCGTCGACGATTTTCGTTTTCCCGCCAATTTGATATCTATTCCAGGGCGCAAGGATGAGGCCATGACTGCTCTTAAATCTAATATAATGGCTGCTCTGAACAA
GGAGGTCAAATCCCTGGATGATGATAACTGGATGTTTGAAGGTCCTCGCTCCCGTATCAACCTTATGTCTCGACAAGGTGGCCCTTTCCTAAAAAAGACAGAGAGAAGAG
AAAATAATGGGTCGGGTTGATAAGAATGACCAGAGATCTACATCCTGGAGAAATCTTGTGATCATGGCGTGGCTCGCACTTGGAAAACACTCGTTTTCATTTAGCCAATC
AAGTAATCGTTCTTCTTTTCAAGTTATAATTCTCCTTTGTCGTTAAGGGTTTCCCAAATGAAATCTTGCTAGCATAGAGTTAGCATTTTCTAGATGCTAAAACTATAGAG
AATTTGGCAGAAAAATGTCTCAACATATAAGTTGCTGGATATAAAATCATAATAGCTAGCTTGGTTTAGTCCATCTTTTTGAATGCCATTCTTTCATGTTCCTTTTTCTA
TGAAGGTTTTGTTTATGATGGTAAAAAAACTCACCCATTAGAGTAGGGTGTGTTTAGATTGAAGGGTTGTTGTAGAGGTTGGTCCAACCCTACGTTTGGATGAAGCAACT
TCAAAAAACCCTCTTAGATCCCTCCATAAAACTTCTATGAACATTCACTACTCTTCTAGTTACAATGCTACTTTTACTATACTCACTCATAATCTTTCTATCCATAGAAT
GATTTTCTACAATAACTACCTATAACTCATCTGTCCAAACAAGTATTTTTTGTTATAGTCACTTATTACTCCTCAGAATCATTATTCCTCATTTTCAAAATCTCTTCTAC
CCAAACATGCTCTGGCTGCTATCTGATAATTTTGACAAAAAT
Protein sequenceShow/hide protein sequence
MNSSSPAHSSISTTAVAGRCATNAAMSVDDFRFPANLISIPGRKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGGPFLKKTERRENNGSG