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Sed0022332 (gene) of Chayote v1 genome

Gene IDSed0022332
OrganismSechium edule (Chayote v1)
DescriptionWD repeat protein
Genome locationLG11:29875830..29880526
RNA-Seq ExpressionSed0022332
SyntenySed0022332
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602211.1 hypothetical protein SDJN03_07444, partial [Cucurbita argyrosperma subsp. sororia]6.0e-9286.73Show/hide
Query:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +S SEIREIEET+SNSE +SLLQ +NP SNS TVK KVPEVEIHLYRQGKGPIDVFKS+LGGW QDQ+EVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW
        F+P+NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAII+IMITLLSTS++SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+D LKK+GW
Subjt:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW

XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]5.3e-8884.9Show/hide
Query:  ESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIRFSPK
        +S +EIRE++ETNS SE Q LL+ +NP SNS TVK KVPEVEIHLYRQGKGPIDVFKS+LGGW QDQ+EVR+ILDKYGFKSVFAFKPDSGRGVPIRF+P+
Subjt:  ESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIRFSPK

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW
        NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAII+I+IT L  S+DSQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+D LKK+GW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW

XP_022960369.1 uncharacterized protein LOC111461110 [Cucurbita moschata]2.8e-8985.2Show/hide
Query:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +S SEIREIEET+SNSE Q LLQ +NP SNS TVK KVPEVEIHLYRQGKGPIDVFKS+LGGW QDQ+EVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW
        F+P+NGRSILTYR GAEI+IDGEPKDSLIKPVT I+F VAII+IMITLLSTS+ SQGWMK LNITGNFPPWILACVVIVFTRSRKRT+D LKK+GW
Subjt:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW

XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]2.3e-9186.22Show/hide
Query:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +S SEIREIEET+SNSE Q LLQ +NP SNS TVK KVPEVEIHLYRQGKGPIDVFKS+LGGW QDQ+EVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW
        F+P+NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAII+I+ITLLSTS++SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+D LKK+GW
Subjt:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW

XP_023518857.1 uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo]8.7e-9186.22Show/hide
Query:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +S SEIREIEET+SNSE Q LLQ  N  SNS TVK KVPEVEIHLYRQGKGPIDVFKS+LGGW QDQ+EVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW
        F+P+NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAII+IMITLLSTS++SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+D LKK+GW
Subjt:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW

TrEMBL top hitse value%identityAlignment
A0A0A0K9G4 Uncharacterized protein3.3e-8884.9Show/hide
Query:  ESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIRFSPK
        +S SEIRE+EETNS SE Q LL+  NP SNS +VK KVPE+EIHL+RQGKGPIDVFKS+LGGW QDQ+EVR+ILDKYGFKSVFAFKPDSGRGVPIRF+P+
Subjt:  ESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIRFSPK

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW
        NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAII+I+IT L  S+DSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKD LKK+GW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW

A0A1S3C3V7 uncharacterized protein LOC1034965712.6e-8884.9Show/hide
Query:  ESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIRFSPK
        +S +EIRE++ETNS SE Q LL+ +NP SNS TVK KVPEVEIHLYRQGKGPIDVFKS+LGGW QDQ+EVR+ILDKYGFKSVFAFKPDSGRGVPIRF+P+
Subjt:  ESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIRFSPK

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW
        NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAII+I+IT L  S+DSQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+D LKK+GW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW

A0A6J1BYH2 uncharacterized protein LOC1110067353.1e-8682.05Show/hide
Query:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR
        MENP++ SEIREIEET SNSEQQ LLQ +NP S+S  VK KVPEVEIHLYRQGKGPIDVFKS+LGGW QDQ+E+REILDKYGFKS FAFKP++GRGVPIR
Subjt:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFG
        F+P+NGRSILTYRDGAEI+IDGEPKDSLIKP+TRIIFGVAI++I+IT L  S++SQG MKKLNI+GNFPPWILACVVIVFTRSRKRT+D LKKFG
Subjt:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFG

A0A6J1HAT7 uncharacterized protein LOC1114611101.4e-8985.2Show/hide
Query:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +S SEIREIEET+SNSE Q LLQ +NP SNS TVK KVPEVEIHLYRQGKGPIDVFKS+LGGW QDQ+EVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW
        F+P+NGRSILTYR GAEI+IDGEPKDSLIKPVT I+F VAII+IMITLLSTS+ SQGWMK LNITGNFPPWILACVVIVFTRSRKRT+D LKK+GW
Subjt:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW

A0A6J1JTD1 uncharacterized protein LOC1114873201.1e-9186.22Show/hide
Query:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ +S SEIREIEET+SNSE Q LLQ +NP SNS TVK KVPEVEIHLYRQGKGPIDVFKS+LGGW QDQ+EVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW
        F+P+NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAII+I+ITLLSTS++SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+D LKK+GW
Subjt:  FSPKNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71780.1 unknown protein5.7e-6462.23Show/hide
Query:  REIEETNSNSEQQSLLQHRNPRS--NSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIRFSPKNGRS
        +EIEET        LL++  P S   S T   KVPEVEIHLY+ GKGPIDVFKSNLGG+ QDQ+EVR IL+KYG K++FAF  + GR VPIRF P+NGRS
Subjt:  REIEETNSNSEQQSLLQHRNPRS--NSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIRFSPKNGRS

Query:  ILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW
        +L YRDGA I+IDGEP+DSL+KP+TRII GV I++++IT L   KD   W+K     G FPPW+LAC+VIVFTR+RKRT+DF KK+GW
Subjt:  ILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATCCCGAGAGCTCGAGCGAAATCCGAGAAATTGAAGAAACAAACTCAAATTCAGAGCAGCAATCTCTTCTTCAGCACCGGAATCCGAGATCGAACTCCATAAC
AGTGAAGAGGAAGGTTCCGGAGGTTGAGATCCATCTTTACCGGCAGGGCAAAGGTCCGATCGACGTCTTTAAATCAAACCTTGGAGGTTGGGGCCAAGATCAGATCGAGG
TCCGTGAGATTCTCGACAAATACGGCTTCAAATCCGTATTCGCCTTCAAACCTGACTCCGGCCGTGGCGTTCCGATTCGATTCAGCCCTAAAAATGGCAGGTCTATATTG
ACTTACAGAGATGGAGCTGAGATTTTCATCGATGGAGAGCCCAAGGATTCCCTGATCAAACCAGTGACCAGGATAATTTTTGGCGTGGCAATTATTTCCATTATGATAAC
GCTTCTCTCGACCTCGAAGGACTCGCAAGGATGGATGAAGAAACTAAATATCACTGGGAACTTCCCTCCTTGGATTCTTGCTTGCGTCGTTATCGTTTTCACGCGCTCGA
GGAAGAGAACGAAGGACTTTCTGAAGAAGTTCGGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAAACAGATCGCAAAAAATGGAGAATCCCGAGAGCTCGAGCGAAATCCGAGAAATTGAAGAAACAAACTCAAATTCAGAGCAGCAATCTCTTCTTCAGCA
CCGGAATCCGAGATCGAACTCCATAACAGTGAAGAGGAAGGTTCCGGAGGTTGAGATCCATCTTTACCGGCAGGGCAAAGGTCCGATCGACGTCTTTAAATCAAACCTTG
GAGGTTGGGGCCAAGATCAGATCGAGGTCCGTGAGATTCTCGACAAATACGGCTTCAAATCCGTATTCGCCTTCAAACCTGACTCCGGCCGTGGCGTTCCGATTCGATTC
AGCCCTAAAAATGGCAGGTCTATATTGACTTACAGAGATGGAGCTGAGATTTTCATCGATGGAGAGCCCAAGGATTCCCTGATCAAACCAGTGACCAGGATAATTTTTGG
CGTGGCAATTATTTCCATTATGATAACGCTTCTCTCGACCTCGAAGGACTCGCAAGGATGGATGAAGAAACTAAATATCACTGGGAACTTCCCTCCTTGGATTCTTGCTT
GCGTCGTTATCGTTTTCACGCGCTCGAGGAAGAGAACGAAGGACTTTCTGAAGAAGTTCGGTTGGTGAATTTCGTTCTCCAGGCCTTCCTTTACTTCTTTTTTAATCAAT
CCTCCAATAGAAAATGGAAAGTAATGAATCAATATATTGATTGTTGTTTCTTGATTTGAAGATCTGGAAATAGGAGATATTATACTGCACTGTGTATTGCTAGCCAAAAT
GGAGCATTCTTGGTCCATTGCTATCATAAATTCCCTGCCTTGATCTGTTCTATGGTTATGTGTAGATAAGCAGTTCTGTTTAGGGAACTGAAACTGAACATGTTTGACCT
ATGGTTTTAATTTGGTTGAGTGATAGATTTCTTTGATTTGAGTTATATAATTTGGATTTATGGAACCA
Protein sequenceShow/hide protein sequence
MENPESSSEIREIEETNSNSEQQSLLQHRNPRSNSITVKRKVPEVEIHLYRQGKGPIDVFKSNLGGWGQDQIEVREILDKYGFKSVFAFKPDSGRGVPIRFSPKNGRSIL
TYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIISIMITLLSTSKDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDFLKKFGW