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Sed0022336 (gene) of Chayote v1 genome

Gene IDSed0022336
OrganismSechium edule (Chayote v1)
Descriptioncircumsporozoite protein-like
Genome locationLG13:26128102..26128515
RNA-Seq ExpressionSed0022336
SyntenySed0022336
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60236.1 hypothetical protein Csa_001434 [Cucumis sativus]2.9e-2363.24Show/hide
Query:  MIDPETAILFTAAPLPGV-----------EIEDDGTGVDAGASDEDVGGAGGEE----AGGKVSEVGEGAAAVG-EGDEAGGVATEGGGADFGEEAGGGL
        MIDPETAILFT APLPGV           E+E+DGTGV  G S+  VGGAGGEE    AGG+V+  G GA   G  G++ GGVAT GGGAD GEEAG  L
Subjt:  MIDPETAILFTAAPLPGV-----------EIEDDGTGVDAGASDEDVGGAGGEE----AGGKVSEVGEGAAAVG-EGDEAGGVATEGGGADFGEEAGGGL

Query:  VGEEAGAAEGAWPRVAATKAKRTRRRNAEEEAIAVK
        VGEEAGAA GAWPR AA KAKRT +  AEEEA+ VK
Subjt:  VGEEAGAAEGAWPRVAATKAKRTRRRNAEEEAIAVK
XP_022136125.1 circumsporozoite protein-like [Momordica charantia]9.7e-1958.99Show/hide
Query:  MIDPETAILFTAAPLPGVE-----------IEDDGTGVDAGASDEDVGGAGGE----EAGGKVSEVGEGAAAVGEGDE----AGGVATEGGGADFGEEAG
        MIDP  A LF AAPLPGVE           IE  G GVDAG S+  VGGAGGE    EAGG+V   G G    G GDE    AGGVAT  GGA FG++AG
Subjt:  MIDPETAILFTAAPLPGVE-----------IEDDGTGVDAGASDEDVGGAGGE----EAGGKVSEVGEGAAAVGEGDE----AGGVATEGGGADFGEEAG

Query:  GGLVGEEAGAAEGAWPRVAATKAKRTRRRNAEEEAIAVK
        GGLVGEEAGAA GAWP+  ATKA  T+   A EEA+AVK
Subjt:  GGLVGEEAGAAEGAWPRVAATKAKRTRRRNAEEEAIAVK
TrEMBL top hitse value%identityAlignment
A0A0A0LJM1 Uncharacterized protein1.4e-2363.24Show/hide
Query:  MIDPETAILFTAAPLPGV-----------EIEDDGTGVDAGASDEDVGGAGGEE----AGGKVSEVGEGAAAVG-EGDEAGGVATEGGGADFGEEAGGGL
        MIDPETAILFT APLPGV           E+E+DGTGV  G S+  VGGAGGEE    AGG+V+  G GA   G  G++ GGVAT GGGAD GEEAG  L
Subjt:  MIDPETAILFTAAPLPGV-----------EIEDDGTGVDAGASDEDVGGAGGEE----AGGKVSEVGEGAAAVG-EGDEAGGVATEGGGADFGEEAGGGL

Query:  VGEEAGAAEGAWPRVAATKAKRTRRRNAEEEAIAVK
        VGEEAGAA GAWPR AA KAKRT +  AEEEA+ VK
Subjt:  VGEEAGAAEGAWPRVAATKAKRTRRRNAEEEAIAVK
A0A6J1C301 circumsporozoite protein-like4.7e-1958.99Show/hide
Query:  MIDPETAILFTAAPLPGVE-----------IEDDGTGVDAGASDEDVGGAGGE----EAGGKVSEVGEGAAAVGEGDE----AGGVATEGGGADFGEEAG
        MIDP  A LF AAPLPGVE           IE  G GVDAG S+  VGGAGGE    EAGG+V   G G    G GDE    AGGVAT  GGA FG++AG
Subjt:  MIDPETAILFTAAPLPGVE-----------IEDDGTGVDAGASDEDVGGAGGE----EAGGKVSEVGEGAAAVGEGDE----AGGVATEGGGADFGEEAG

Query:  GGLVGEEAGAAEGAWPRVAATKAKRTRRRNAEEEAIAVK
        GGLVGEEAGAA GAWP+  ATKA  T+   A EEA+AVK
Subjt:  GGLVGEEAGAAEGAWPRVAATKAKRTRRRNAEEEAIAVK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGATCCGGAGACGGCGATTCTGTTCACGGCAGCGCCATTGCCAGGAGTTGAGATCGAAGATGATGGAACCGGAGTCGACGCGGGTGCGTCAGACGAAGATGTAGG
CGGAGCCGGAGGAGAAGAAGCCGGCGGCAAGGTTTCAGAGGTCGGAGAAGGAGCGGCGGCCGTCGGAGAAGGAGATGAAGCCGGAGGAGTGGCGACCGAGGGCGGAGGAG
CCGATTTCGGAGAGGAAGCCGGCGGCGGCTTGGTTGGGGAAGAAGCAGGCGCGGCGGAAGGAGCCTGGCCTAGGGTGGCGGCAACCAAGGCGAAGAGGACGAGGAGGAGA
AATGCAGAGGAAGAAGCCATAGCTGTGAAGATGAGGAGAATGGAAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGATCCGGAGACGGCGATTCTGTTCACGGCAGCGCCATTGCCAGGAGTTGAGATCGAAGATGATGGAACCGGAGTCGACGCGGGTGCGTCAGACGAAGATGTAGG
CGGAGCCGGAGGAGAAGAAGCCGGCGGCAAGGTTTCAGAGGTCGGAGAAGGAGCGGCGGCCGTCGGAGAAGGAGATGAAGCCGGAGGAGTGGCGACCGAGGGCGGAGGAG
CCGATTTCGGAGAGGAAGCCGGCGGCGGCTTGGTTGGGGAAGAAGCAGGCGCGGCGGAAGGAGCCTGGCCTAGGGTGGCGGCAACCAAGGCGAAGAGGACGAGGAGGAGA
AATGCAGAGGAAGAAGCCATAGCTGTGAAGATGAGGAGAATGGAAATCTGA
Protein sequenceShow/hide protein sequence
MIDPETAILFTAAPLPGVEIEDDGTGVDAGASDEDVGGAGGEEAGGKVSEVGEGAAAVGEGDEAGGVATEGGGADFGEEAGGGLVGEEAGAAEGAWPRVAATKAKRTRRR
NAEEEAIAVKMRRMEI