; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0022338 (gene) of Chayote v1 genome

Gene IDSed0022338
OrganismSechium edule (Chayote v1)
DescriptionATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like
Genome locationLG08:35607368..35611801
RNA-Seq ExpressionSed0022338
SyntenySed0022338
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137466.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus]1.7e-6884.18Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL
        MEAAI GR+PLSP  FF    PG KYY +K  RNR+ LMM+SVAELGK GGL EKP IEKTTPGRESEFDVRKSRKTSPPYRVLLHND++NKREYVVQVL
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL

Query:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        MKVIPGMT+D AVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRG+GLLSSIEPASDGC
Subjt:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

XP_008456997.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucumis melo]4.4e-6984.81Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL
        MEAAI GR+PLSP  FF    PG KYY +K  RNR+ LMM+SVAELGK GGL EKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHND++NKREYVVQVL
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL

Query:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        MKVIPGMT+D AVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRG+GLLSSIEPASDGC
Subjt:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

XP_022136971.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Momordica charantia]2.8e-7187.34Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL
        MEAAI GR+PLSP HFFN   PG KYY +K  RNR+ LMMLSVAELGK GGL EKPTIEKTTPGRESEFDVRKSRKT+PPYRVLLHND+YNKREYVVQVL
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL

Query:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        MKVIPGMT+D AVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRG+GLLSSIEPASDGC
Subjt:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

XP_022994956.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita maxima]7.5e-6985.44Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL
        MEAAI GRLPLSP HFFN   PG KYY +K  RNR+IL MLSVAELGK GGL EKPT EKTTPGRESEF+VRKSRK +PPYRVLLHND++NKREYVVQVL
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL

Query:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        MKVIPGMTVD AVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRG+GLLSSIEPASDGC
Subjt:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

XP_038894047.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Benincasa hispida]1.2e-6985.44Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL
        MEAAI GR+ LSP HFF+   PG KYY +K  RNR++LMMLSVAELGK GGL EKPTIEKTTPGRESEFDVRK RKTSPPYRVLLHND+YNKREYVVQVL
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL

Query:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        MKVIPGMT+D AVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRG+GLLSSIEPASDGC
Subjt:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

TrEMBL top hitse value%identityAlignment
A0A0A0LSY6 ClpS domain-containing protein8.1e-6984.18Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL
        MEAAI GR+PLSP  FF    PG KYY +K  RNR+ LMM+SVAELGK GGL EKP IEKTTPGRESEFDVRKSRKTSPPYRVLLHND++NKREYVVQVL
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL

Query:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        MKVIPGMT+D AVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRG+GLLSSIEPASDGC
Subjt:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

A0A1S3C561 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like2.1e-6984.81Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL
        MEAAI GR+PLSP  FF    PG KYY +K  RNR+ LMM+SVAELGK GGL EKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHND++NKREYVVQVL
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL

Query:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        MKVIPGMT+D AVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRG+GLLSSIEPASDGC
Subjt:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

A0A6J1C511 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X11.3e-7187.34Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL
        MEAAI GR+PLSP HFFN   PG KYY +K  RNR+ LMMLSVAELGK GGL EKPTIEKTTPGRESEFDVRKSRKT+PPYRVLLHND+YNKREYVVQVL
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL

Query:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        MKVIPGMT+D AVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRG+GLLSSIEPASDGC
Subjt:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

A0A6J1GS56 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.4e-6884.81Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL
        MEAAI GRLPLSP HFFN   PG KYY +K  RNR+IL MLSVAELGK GGL EKP  EKTTPGRESEF+VRKSRK +PPYRVLLHND++NKREYVVQVL
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL

Query:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        MKVIPGMTVD AVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRG+GLLSSIEPASDGC
Subjt:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

A0A6J1K0P0 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like3.6e-6985.44Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL
        MEAAI GRLPLSP HFFN   PG KYY +K  RNR+IL MLSVAELGK GGL EKPT EKTTPGRESEF+VRKSRK +PPYRVLLHND++NKREYVVQVL
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVL

Query:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        MKVIPGMTVD AVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRG+GLLSSIEPASDGC
Subjt:  MKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic5.1e-2051.38Show/hide
Query:  GGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVLMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLS
        GG+ + PT   TT  ++    V +S+K  P Y+VLLHND+YNKREYVV+VL+KV+  +TVD AV  MQEAH  G+++V+ C Q +AE +C  LR +GL S
Subjt:  GGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVLMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLS

Query:  SIEPASDGC
        +IEP   GC
Subjt:  SIEPASDGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS1.2e-1656.96Show/hide
Query:  RKTSPPYRVLLHNDSYNKREYVVQVLMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEP
        RK +P YRVLLHND +N  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+  GL SSIEP
Subjt:  RKTSPPYRVLLHNDSYNKREYVVQVLMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS6.1e-1343.14Show/hide
Query:  EKPTIEKTTPGRESEFD--VRKSRKTSPPYRVLLHNDSYNKREYVVQVLMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSI
        E PT    +PG  +  D    + RK SP Y+VLLHND  N  EYV+  L +V+P ++   A+ +M EAH  G+ +VI+C    AE +C  L+  GL SSI
Subjt:  EKPTIEKTTPGRESEFD--VRKSRKTSPPYRVLLHNDSYNKREYVVQVLMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSI

Query:  EP
        EP
Subjt:  EP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS4.2e-1454.79Show/hide
Query:  RKTSPPYRVLLHNDSYNKREYVVQVLMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGL
        RK +P YRVLLHND +N  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+  GL
Subjt:  RKTSPPYRVLLHNDSYNKREYVVQVLMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic2.2e-5569.18Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSV-AELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQV
        ME AI GRL L+P+  FN  S         P  NR+ILM LS  A LGK GG+ +KP IEKTTPGRESEFD+RKS+K +PPYRV+LHND++NKREYVVQV
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSV-AELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQV

Query:  LMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        LMKVIPGMTVD AVNIMQEAH NG++VVI+CAQ DAE HCMQLRG+GLLSS+EP   GC
Subjt:  LMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.6e-5669.18Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSV-AELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQV
        ME AI GRL L+P+  FN  S         P  NR+ILM LS  A LGK GG+ +KP IEKTTPGRESEFD+RKS+K +PPYRV+LHND++NKREYVVQV
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSV-AELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQV

Query:  LMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        LMKVIPGMTVD AVNIMQEAH NG++VVI+CAQ DAE HCMQLRG+GLLSS+EP   GC
Subjt:  LMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein3.6e-3753.46Show/hide
Query:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSV-AELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQV
        ME AI GRL L+P+  FN  S         P  NR+ILM LS  A LGK GG+ +KP IEKTTPGRESEFD+RKS+K +PPYRV+LHND++NKREYVVQV
Subjt:  MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSV-AELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQV

Query:  LMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC
        LMK                               DAE HCMQLRG+GLLSS+EP   GC
Subjt:  LMKVIPGMTVDIAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTGCAATTGGCGGTCGACTTCCTCTTTCACCCACCCATTTCTTCAATCCGGCCAGCCCAGGGGTCAAATACTATTGTTATAAACCAAGTAGAAACCGGAACAT
CTTAATGATGTTATCAGTTGCTGAGCTCGGAAAAGCTGGAGGGTTGGCAGAAAAGCCAACCATAGAGAAGACAACACCTGGTCGTGAATCTGAGTTTGATGTCAGGAAAT
CAAGGAAAACTTCTCCACCTTACCGAGTGTTGCTCCATAACGACAGTTACAATAAGCGAGAATATGTTGTGCAAGTTCTGATGAAGGTGATCCCCGGTATGACCGTCGAC
ATTGCTGTCAACATAATGCAGGAGGCACATTACAATGGCATGTCGGTGGTAATTATCTGCGCCCAAGTTGATGCAGAAGATCACTGTATGCAGCTGAGAGGCAGTGGTCT
TCTGAGTTCAATTGAGCCTGCAAGTGATGGCTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATCTCTGAACAGAGCCTTTCAATCACACAGAGAGAGGCCATGGAAGCTGCAATTGGCGGTCGACTTCCTCTTTCACCCACCCATTTCTTCAATCCGGCCAGCCCAGGGGT
CAAATACTATTGTTATAAACCAAGTAGAAACCGGAACATCTTAATGATGTTATCAGTTGCTGAGCTCGGAAAAGCTGGAGGGTTGGCAGAAAAGCCAACCATAGAGAAGA
CAACACCTGGTCGTGAATCTGAGTTTGATGTCAGGAAATCAAGGAAAACTTCTCCACCTTACCGAGTGTTGCTCCATAACGACAGTTACAATAAGCGAGAATATGTTGTG
CAAGTTCTGATGAAGGTGATCCCCGGTATGACCGTCGACATTGCTGTCAACATAATGCAGGAGGCACATTACAATGGCATGTCGGTGGTAATTATCTGCGCCCAAGTTGA
TGCAGAAGATCACTGTATGCAGCTGAGAGGCAGTGGTCTTCTGAGTTCAATTGAGCCTGCAAGTGATGGCTGTTGAATAGGAAAAATAGACTGTAATGTACTCTTTTGCC
CCTTAGTTATCAGCCATATTAAAATTGCATGTTCTCAACTGCTACAATATTGCAAGTTGCACCTATGTACATAAGTAGAGATACTTTATAAAGAAATACACTTCAATTTA
CGAATACATATTCACTACCTATTCATCTGTGTCGATTTTGGGTACACTTGTTGCAGTTGTAGTTTGATCTTGTTCAATTGGATTGGATTCCTTCTTGTAGTTAGG
Protein sequenceShow/hide protein sequence
MEAAIGGRLPLSPTHFFNPASPGVKYYCYKPSRNRNILMMLSVAELGKAGGLAEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDSYNKREYVVQVLMKVIPGMTVD
IAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGSGLLSSIEPASDGC