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Sed0022365 (gene) of Chayote v1 genome

Gene IDSed0022365
OrganismSechium edule (Chayote v1)
DescriptionSTE20/SPS1-related proline-alanine-rich protein kinase-like
Genome locationLG06:8101262..8101667
RNA-Seq ExpressionSed0022365
SyntenySed0022365
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571852.1 hypothetical protein SDJN03_28580, partial [Cucurbita argyrosperma subsp. sororia]2.2e-0553.49Show/hide
Query:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPA------ATVEAPFVAPAPAPSAAAFTSGFGFAGSMAVAV--LASALF
        MAS++ + +L ++ALVAS A A HHH+H  SPAPAPSP       A   +P  APAPA S A    G GFAGSMAV V   A+ALF
Subjt:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPA------ATVEAPFVAPAPAPSAAAFTSGFGFAGSMAVAV--LASALF
KGN43805.2 hypothetical protein Csa_017194, partial [Cucumis sativus]1.4e-0759.09Show/hide
Query:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPAATVEAPFVAPA-----PAPSAAAFTSGFGF-AGSMAVAV---LASALFV
        MAS++ + LL VLALVASSATA HHHSHP SPAPAPSP A VEAP V P+     P  + A   +G G  +GSMAV+V    A+ALFV
Subjt:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPAATVEAPFVAPA-----PAPSAAAFTSGFGF-AGSMAVAV---LASALFV
XP_022952911.1 STE20/SPS1-related proline-alanine-rich protein kinase-like [Cucurbita moschata]3.8e-0553.49Show/hide
Query:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPA------ATVEAPFVAPAPAPSAAAFTSGFGFAGSMAVAV--LASALF
        MAS++ +  L ++ALVAS A A HHH+H  SPAPAPSP       A   +P  APAPA S A    G GFAGSMAV V   A+ALF
Subjt:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPA------ATVEAPFVAPAPAPSAAAFTSGFGFAGSMAVAV--LASALF
XP_023554722.1 uncharacterized protein LOC111811901 [Cucurbita pepo subsp. pepo]2.2e-0553.49Show/hide
Query:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPA------ATVEAPFVAPAPAPSAAAFTSGFGFAGSMAVAV--LASALF
        MAS++ + +L ++ALVAS A A HHH+H  SPAPAPSP       A   +P  APAPA S A    G GFAGSMAV V   A+ALF
Subjt:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPA------ATVEAPFVAPAPAPSAAAFTSGFGFAGSMAVAV--LASALF
TrEMBL top hitse value%identityAlignment
A0A0A0K427 Uncharacterized protein6.8e-0859.09Show/hide
Query:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPAATVEAPFVAPA-----PAPSAAAFTSGFGF-AGSMAVAV---LASALFV
        MAS++ + LL VLALVASSATA HHHSHP SPAPAPSP A VEAP V P+     P  + A   +G G  +GSMAV+V    A+ALFV
Subjt:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPAATVEAPFVAPA-----PAPSAAAFTSGFGF-AGSMAVAV---LASALFV
A0A6J1GLJ6 STE20/SPS1-related proline-alanine-rich protein kinase-like1.9e-0553.49Show/hide
Query:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPA------ATVEAPFVAPAPAPSAAAFTSGFGFAGSMAVAV--LASALF
        MAS++ +  L ++ALVAS A A HHH+H  SPAPAPSP       A   +P  APAPA S A    G GFAGSMAV V   A+ALF
Subjt:  MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPA------ATVEAPFVAPAPAPSAAAFTSGFGFAGSMAVAV--LASALF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGAATTTAATTGCTCTTCTCTTCGTTCTGGCTTTGGTAGCTTCCTCAGCTACGGCGGCGCACCACCATTCGCACCCGAATTCGCCGGCGCCAGCCCCTTC
TCCGGCGGCCACCGTGGAGGCTCCATTTGTTGCTCCGGCTCCGGCGCCGAGCGCCGCCGCTTTTACTTCTGGATTTGGTTTTGCGGGATCTATGGCTGTTGCTGTTCTGG
CTTCTGCTCTGTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
CAACAAATTCCCAAATTCTCAATTTCTTCAACAATTCCTTAAGAAAATCCTCTTCAATGGCTTCCAAGAATTTAATTGCTCTTCTCTTCGTTCTGGCTTTGGTAGCTTCC
TCAGCTACGGCGGCGCACCACCATTCGCACCCGAATTCGCCGGCGCCAGCCCCTTCTCCGGCGGCCACCGTGGAGGCTCCATTTGTTGCTCCGGCTCCGGCGCCGAGCGC
CGCCGCTTTTACTTCTGGATTTGGTTTTGCGGGATCTATGGCTGTTGCTGTTCTGGCTTCTGCTCTGTTTGTTTAGATGAATTTTTACATTTGATTAATGGGTTTTTTTG
TTGTTGTTATTTGTTTAATCATATTTATATGATTTTGTTGTTTTATTATATCTTAATGAGATTATTATTATAATTA
Protein sequenceShow/hide protein sequence
MASKNLIALLFVLALVASSATAAHHHSHPNSPAPAPSPAATVEAPFVAPAPAPSAAAFTSGFGFAGSMAVAVLASALFV