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Sed0022374 (gene) of Chayote v1 genome

Gene IDSed0022374
OrganismSechium edule (Chayote v1)
DescriptionThylakoid soluble phosphoprotein TSP
Genome locationLG05:45357968..45358739
RNA-Seq ExpressionSed0022374
SyntenySed0022374
Gene Ontology termsNA
InterPro domainsIPR021584 - Thylakoid soluble phosphoprotein TSP9
IPR037244 - Thylakoid soluble phosphoprotein TSP9 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010512.1 hypothetical protein SDJN02_27306, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-3178.95Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD
        MASL IAFSPAAGRVFAATAAK +GE+KKEKG+LDWI+G +E+DQLLETDPVLQKV+ KD  SG   TV GG+KNSVQV PKKNGGFGGLFAK+D
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD
XP_004143212.1 uncharacterized protein LOC101205268 [Cucumis sativus]1.7e-3180.41Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNG-ATVRGGQKNSVQVLPKKN-GGFGGLFAKKD
        MASL IAFSPAAGRVFAATAAK +GE+KKEKG+LDWI+G + KDQLLETDPVLQKV+ KD  SGNG  +VRGG+KNSVQV PKKN GGFGGLFAKKD
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNG-ATVRGGQKNSVQVLPKKN-GGFGGLFAKKD
XP_008464052.1 PREDICTED: uncharacterized protein LOC103502033 [Cucumis melo]1.4e-3078.12Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGG-FGGLFAKKD
        MASL IAFSPAAGRVFAATAAK +GE+KKEKG+LDWI+G + KDQLLETDPVLQKV+ KDG SGNG     G+KNSVQ+ PKKNGG FGGLFAKKD
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGG-FGGLFAKKD
XP_022947653.1 uncharacterized protein LOC111451452 [Cucurbita moschata]5.6e-3585.26Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD
        MASL+ AFSPAAGRVFAATAAK +GE KKEKGILDWILGGMEKDQLLETDPVLQKV+ K+GG+ NG TVRGG+KNSVQV PKKNG FGGLFAKKD
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD
XP_023532336.1 uncharacterized protein LOC111794525 [Cucurbita pepo subsp. pepo]2.5e-3585.26Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD
        MASL+ AFSPAAGRVFAATAAK +GE+KKEKGILDWILGGMEKDQLLETDPVLQKV+ K+GG+ NG TVRGG+KNSVQV PKKNG FGGLFAKKD
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD
TrEMBL top hitse value%identityAlignment
A0A0A0KC59 Uncharacterized protein8.1e-3280.41Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNG-ATVRGGQKNSVQVLPKKN-GGFGGLFAKKD
        MASL IAFSPAAGRVFAATAAK +GE+KKEKG+LDWI+G + KDQLLETDPVLQKV+ KD  SGNG  +VRGG+KNSVQV PKKN GGFGGLFAKKD
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNG-ATVRGGQKNSVQVLPKKN-GGFGGLFAKKD
A0A1S3CKK5 uncharacterized protein LOC1035020336.9e-3178.12Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGG-FGGLFAKKD
        MASL IAFSPAAGRVFAATAAK +GE+KKEKG+LDWI+G + KDQLLETDPVLQKV+ KDG SGNG     G+KNSVQ+ PKKNGG FGGLFAKKD
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGG-FGGLFAKKD
A0A5A7V5S9 Uncharacterized protein6.9e-3178.12Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGG-FGGLFAKKD
        MASL IAFSPAAGRVFAATAAK +GE+KKEKG+LDWI+G + KDQLLETDPVLQKV+ KDG SGNG     G+KNSVQ+ PKKNGG FGGLFAKKD
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGG-FGGLFAKKD
A0A6J1G777 uncharacterized protein LOC1114514522.7e-3585.26Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD
        MASL+ AFSPAAGRVFAATAAK +GE KKEKGILDWILGGMEKDQLLETDPVLQKV+ K+GG+ NG TVRGG+KNSVQV PKKNG FGGLFAKKD
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD
A0A6J1L2X7 uncharacterized protein LOC1114999272.7e-3585.26Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD
        MASL+ AFSPAAGRVFAATAAK +GE KKEKGILDWILGGMEKDQLLETDPVLQKV+ K+GG+ NG TVRGG+KNSVQV PKKNG FGGLFAKKD
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G47070.1 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2.6e-1448.39Show/hide
Query:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEK-DQLLETDPVLQKVDEKDG-GSGNGATVRGGQKNSVQVLPKKN-GGFGGL
        ++SL ++F+PA  RV+A +    SG  K+EK  +D++LG M K DQ  ET+P+L+KVDEK+G  +G   TVRGG+ ++   +PKK+ GGFGGL
Subjt:  MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEK-DQLLETDPVLQKVDEKDG-GSGNGATVRGGQKNSVQVLPKKN-GGFGGL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTCTCACGATCGCATTTTCTCCGGCCGCCGGACGAGTGTTCGCAGCCACGGCGGCGAAGAGCTCCGGCGAAACCAAGAAGGAAAAGGGCATTCTCGATTGGAT
CCTGGGAGGCATGGAGAAAGATCAGCTTTTAGAAACCGACCCCGTTCTTCAAAAAGTCGACGAGAAGGACGGAGGTTCCGGCAACGGCGCCACCGTCCGCGGCGGCCAGA
AGAATTCCGTCCAAGTTCTGCCCAAGAAGAACGGCGGCTTCGGCGGTCTCTTTGCCAAGAAGGACTGA
mRNA sequenceShow/hide mRNA sequence
GAACAAAAAACCAATGGCCTCTCTTCCGGATAAGGCGCCTGTGGTGAGCTCAAGCTTTTGAACATATCCCATCCCCTCTTATTTTACCCAAACATTCCTAAATCCTTTCA
TTTCCATTTCCATTATTCTTTCCTTTTAAAGTTGAATAATGGCCTCTCTCACGATCGCATTTTCTCCGGCCGCCGGACGAGTGTTCGCAGCCACGGCGGCGAAGAGCTCC
GGCGAAACCAAGAAGGAAAAGGGCATTCTCGATTGGATCCTGGGAGGCATGGAGAAAGATCAGCTTTTAGAAACCGACCCCGTTCTTCAAAAAGTCGACGAGAAGGACGG
AGGTTCCGGCAACGGCGCCACCGTCCGCGGCGGCCAGAAGAATTCCGTCCAAGTTCTGCCCAAGAAGAACGGCGGCTTCGGCGGTCTCTTTGCCAAGAAGGACTGACGGC
GACGGCGGCGATTATGACATTTCACTCATTATATAATTTCTTTCAATTTGGAAACTCTTGCAATTTCAGGCACATGTTCTTCAATACCATCGTCACAATATTGATTATTA
TTACTATTATTGTTGCTAATTTTGTTCATCTTTATTTTCTATATTTAATTTTGATTGATTATATGGCAAAAAGATCTTGCTGCTCATATAAATGATAATGTCTGTTATCT
TGGCAGATATGTAAGATATAATAAGAAATGGATCCTCACTTATCTAGTAATAATAATCAACTATGGAAAAAAAAAATCCATAAAAGGTACATAGAGTTTGTTGCTATTAT
GA
Protein sequenceShow/hide protein sequence
MASLTIAFSPAAGRVFAATAAKSSGETKKEKGILDWILGGMEKDQLLETDPVLQKVDEKDGGSGNGATVRGGQKNSVQVLPKKNGGFGGLFAKKD