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Sed0022384 (gene) of Chayote v1 genome

Gene IDSed0022384
OrganismSechium edule (Chayote v1)
DescriptionPaternally-expressed gene 3 protein
Genome locationLG03:8848638..8850032
RNA-Seq ExpressionSed0022384
SyntenySed0022384
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB1324049.1 unnamed protein product, partial [Coregonus sp. 'balchen']1.9e-1549.23Show/hide
Query:  AHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFI--AHPATKSFIAHPATKSF
        AH  + S   HPA+ S  AH  + S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ S    AHPA+ S  +HPA+ S 
Subjt:  AHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFI--AHPATKSFIAHPATKSF

Query:  IAHPATRSFIAHPATRSFTAHPVTRSFIAH
         AHPA+ S  AHPA+ S  AHP + S  +H
Subjt:  IAHPATRSFIAHPATRSFTAHPVTRSFIAH

KAE8578264.1 hypothetical protein XENTR_v10023422 [Xenopus tropicalis]3.6e-1436.67Show/hide
Query:  FIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSF
        +IV PA   ++A      +I HPA   ++A PA   ++  PA R ++A PA R +I  PA R ++A PA R ++A PA + ++A PA + ++A PA R +
Subjt:  FIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSF

Query:  IAHPATRSFTAHPVTRSFIA
        +A PA R + A P    ++A
Subjt:  IAHPATRSFTAHPVTRSFIA

KOB65584.1 hypothetical protein OBRU01_22515, partial [Operophtera brumata]1.1e-1343.8Show/hide
Query:  RSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATR
        RSFIV  A+RSF+     RSF+   A RSF+   A RSFI   A RSF+   A RSF+   A RSF+   A R F+   A +SF+   A +SF+ + A R
Subjt:  RSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATR

Query:  SFIAHPATRSFTAHPVTRSFI
        SF+   A RSF      RSF+
Subjt:  SFIAHPATRSFTAHPVTRSFI

WP_052045004.1 M10 family metallopeptidase C-terminal domain-containing protein [Arsenophonus endosymbiont of Nilaparvata lugens]3.6e-1443.94Show/hide
Query:  AHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIA
        AH    +   HP T +  AH    +  AH AT +  AHP T++  AHPAT +  AHPAT +  AHP T +  AHPAT +  AHP T +  AHP T +  A
Subjt:  AHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIA

Query:  HPATRSFIAHPATRSFTAHPVTRSFIAHLVAK
        HP T +   HP T + TAHP T S I+H+  K
Subjt:  HPATRSFIAHPATRSFTAHPVTRSFIAHLVAK

XP_041694679.1 lysine-specific demethylase 4A-like [Coregonus clupeaformis]5.8e-1245.6Show/hide
Query:  PATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFI--AHPATKSFIAHPATKSFIAHPATRSFIA
        PA+ S  +   + S  A PA+ S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ S    AHPA+ S  +HPA+ S  AHPA+ S  A
Subjt:  PATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFI--AHPATKSFIAHPATKSFIAHPATRSFIA

Query:  HPATRSFTAHPVTRSFIAHLVAKRT
        HPA+ S  +HP + S   + + +RT
Subjt:  HPATRSFTAHPVTRSFIAHLVAKRT

TrEMBL top hitse value%identityAlignment
A0A0L7KRD6 Peptidase S1 domain-containing protein (Fragment)5.1e-1443.8Show/hide
Query:  RSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATR
        RSFIV  A+RSF+     RSF+   A RSF+   A RSFI   A RSF+   A RSF+   A RSF+   A R F+   A +SF+   A +SF+ + A R
Subjt:  RSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATR

Query:  SFIAHPATRSFTAHPVTRSFI
        SF+   A RSF      RSF+
Subjt:  SFIAHPATRSFTAHPVTRSFI

A0A212DDP8 Uncharacterized protein1.6e-0734.45Show/hide
Query:  SFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRS
        S+   PA  S++  L   S+   PA  S+   PA  S+   PA  S+   PA  S+   PA  S+   PA  S+   PA  S+I  PA  S+   PA  S
Subjt:  SFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRS

Query:  FIAHPATRSFTAHPVTRSF
        +I  PA  S+T  P   S+
Subjt:  FIAHPATRSFTAHPVTRSF

A0A287SZ54 Uncharacterized protein2.9e-0943.86Show/hide
Query:  ATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPA
        AT SF+  +   SF    AT S     AT SF  H AT SF   P T SF+   AT SF+  P T SF   PAT SF+   AT SF    AT SF     
Subjt:  ATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHPA

Query:  TRSFTAHPVTRSFI
        T S T    T SFI
Subjt:  TRSFTAHPVTRSFI

A0A5C3L4C9 Uncharacterized protein (Fragment)2.4e-1144.26Show/hide
Query:  SFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRS
        SF  HP   SF  H    SF  HP   SF  HP   SF  HP   SF  HP   SF  HP   SF  HP   SF  HP   SF  HP   SF  HP   S
Subjt:  SFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRS

Query:  FIAHPATRSFTAHPVTRSFIAH
        F  HP   SF  HP   SF  H
Subjt:  FIAHPATRSFTAHPVTRSFIAH

A0A6F9AKI9 [Histone H3]-trimethyl-L-lysine(9) demethylase (Fragment)9.3e-1649.23Show/hide
Query:  AHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFI--AHPATKSFIAHPATKSF
        AH  + S   HPA+ S  AH  + S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ S  AHPA+ S    AHPA+ S  +HPA+ S 
Subjt:  AHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFI--AHPATKSFIAHPATKSF

Query:  IAHPATRSFIAHPATRSFTAHPVTRSFIAH
         AHPA+ S  AHPA+ S  AHP + S  +H
Subjt:  IAHPATRSFIAHPATRSFTAHPVTRSFIAH

SwissProt top hitse value%identityAlignment
Q6H236 Paternally-expressed gene 3 protein2.0e-0731.58Show/hide
Query:  PATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHP
        PA  S+       S+   PA  S+   PA  S+   PA  S+   PA  S+   PA  S+   PA  S+   PA  S+   PA  S+   PA  ++   P
Subjt:  PATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIAHP

Query:  ATRSFTAHPVTRSF
        A  S+T  P   S+
Subjt:  ATRSFTAHPVTRSF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCATCTCATTGCAAGGTCGTTTATAGTGCATCCTGCAACAAGGTCGTTTATGGCGCATCTCATCGCAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTAT
AGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAG
CGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAAGTCGTTTATAGCGCATCCTGCAACAAAGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCG
CATCCAGCAACAAGGTCGTTTACAGCGCATCCCGTCACAAGGTCATTTATAGCGCATCTCGTTGCAAAGCGCACTCAGCCACAAGGTCGTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCATCTCATTGCAAGGTCGTTTATAGTGCATCCTGCAACAAGGTCGTTTATGGCGCATCTCATCGCAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTAT
AGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAG
CGCATCCTGCAACAAGGTCGTTTATAGCGCATCCTGCAACAAAGTCGTTTATAGCGCATCCTGCAACAAAGTCGTTTATAGCGCATCCTGCAACAAGGTCGTTTATAGCG
CATCCAGCAACAAGGTCGTTTACAGCGCATCCCGTCACAAGGTCATTTATAGCGCATCTCGTTGCAAAGCGCACTCAGCCACAAGGTCGTTTATAGCACATCCGGTGACA
AGGTCATTTATAGCATCATCAAGGGTCATCTATAGCATCATCAAAGGTCAGATCTCATGGAGGATCGGGTATCTTATTTTATCTCTATGAGATGAGAAGCGTCTTTGCAA
CAAATTCTCGACCGAAAAAAGCTCTCAAGTGGCCAAATCTTGTTTAGAAAAAAAAAAAAAAAAAAACATTTTGAAGAAAAAAATGTTTAAAACTAAAAGGGTCATTTAAA
CCAAAAGTTGTGGGATCTTTTCAATATTTTCAATCCATTCAGTATGAATATGTTGATCACTAAGGTTGTTCCATTAAAAGTCAGTTGCTATTTAAAGAAAATTATGATAA
ATTTTGTCAAATTAAAAGGGTTATTGCAATTTGGAAGAATAAAGTCTAAACCATATTCAAGATAAAAATTCAAACTAAGATTAAAAAAAAAAAAAAGGAGACAAGACTAT
CAATGAAGCAAAAAAAGCTCACAATCCTCATATATTCAACCAAAATTTATGGTACAAGATCCAAAAGAAATATGTGATCATGATGGATAGAAATACAAAAAAAAAAGAGA
TTGTTGTAATATGGTTACTGTGATAAAGAAAAAAGAAATCTTTTACTCCCATGATTCAATC
Protein sequenceShow/hide protein sequence
MAHLIARSFIVHPATRSFMAHLIARSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATRSFIAHPATKSFIAHPATKSFIAHPATRSFIA
HPATRSFTAHPVTRSFIAHLVAKRTQPQGRL