CuGenDBv2

Gene ID	Sed0022386
Organism	Sechium edule (Chayote v1)
Description	late embryogenesis abundant protein At5g17165-like
Genome location	LG13:2063591..2069686
RNA-Seq Expression	Sed0022386
Synteny	Sed0022386
Gene Ontology terms	NA
InterPro domains	IPR039291 - Late embryogenesis abundant protein At5g17165-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600216.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-51

84.13

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDH-PAGAANRATDGG
        MAANSRSAGAIAGLGKRITNQIWT DSAISSSAL FRRA H+  YDKNPDE VRPSIVPDDVIQPQAA+KYWAPHP TGVFGP  D   A A +RA DGG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDH-PAGAANRATDGG

Query:  NHGAADEEKAWFRPTSLEDSEKPHGF
        NH AA+EEKAWFRPTSLEDSEKPHGF
Subjt:  NHGAADEEKAWFRPTSLEDSEKPHGF

XP_022941802.1 late embryogenesis abundant protein At5g17165-like isoform X1 [Cucurbita moschata]

6.0e-53

85.71

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG
        MAANSRSAGAIAGLGKRITNQIWTSDSAISSSAL FRRA H+  YDKNPDE VRPSIVPDDVIQPQAA+KYWAPHP TGVFGP  D P A A +RA DGG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG

Query:  NHGAADEEKAWFRPTSLEDSEKPHGF
        NH AA+EEKAWFRPTSLEDSEKPHGF
Subjt:  NHGAADEEKAWFRPTSLEDSEKPHGF

XP_022941803.1 late embryogenesis abundant protein At5g17165-like isoform X2 [Cucurbita moschata]

5.6e-51

84.92

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG
        MAANSRSAGAIAGLGKRITNQIWTSDSAISSSAL F RA H+  YDKNPDE VRPSIVPDDVIQPQAA+KYWAPHP TGVFGP  D P A A +RA DGG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG

Query:  NHGAADEEKAWFRPTSLEDSEKPHGF
        NH AA+EEKAWFRPTSLEDSEKPHGF
Subjt:  NHGAADEEKAWFRPTSLEDSEKPHGF

XP_022990289.1 late embryogenesis abundant protein At5g17165-like isoform X1 [Cucurbita maxima]

2.1e-50

83.33

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG
        MAANSRSAGAIAGLGKRITNQI TSDSAISSSAL FRRA H+  YDKNPDE VRPSIVPDDVIQPQAA+KYWAPHP TGVFGP  + P A  A RA DGG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG

Query:  NHGAADEEKAWFRPTSLEDSEKPHGF
        NH A +EEKAWFRPTSLEDSEKPHGF
Subjt:  NHGAADEEKAWFRPTSLEDSEKPHGF

XP_023512363.1 late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]

3.6e-50

84.13

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG
        MAANSRSAGAIAGLGKRITNQIWTSDSAISSSAL F RA H+  YDKNPDE VRPSIVPDDVIQPQ A+KYWAPHP TGVFGP  D P A A +RA DGG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG

Query:  NHGAADEEKAWFRPTSLEDSEKPHGF
        NH AA+EEKAWFRPTSLEDSEKPHGF
Subjt:  NHGAADEEKAWFRPTSLEDSEKPHGF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BYE5 uncharacterized protein LOC103494437

7.4e-49

80.15

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Query:  MAANSRSAGAIAGLGKRITNQIWTS-----DSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHPA--GAAN
        MAANSRSAGAIAGLGKRIT+QIWTS     +S ISSSA  FRRA H+ VYDKNP+E VRPSIVPDDVIQPQAADKYWAPHPQTGVFGP +D+PA   AAN
Subjt:  MAANSRSAGAIAGLGKRITNQIWTS-----DSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHPA--GAAN

Query:  RATDGGNHGAADEEKAWFRPTSLEDSEKPHG
        RA D GN+ AA+EEKAWFRPTSLEDSEKPHG
Subjt:  RATDGGNHGAADEEKAWFRPTSLEDSEKPHG

A0A6J1FNH5 late embryogenesis abundant protein At5g17165-like isoform X1

2.9e-53

85.71

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG
        MAANSRSAGAIAGLGKRITNQIWTSDSAISSSAL FRRA H+  YDKNPDE VRPSIVPDDVIQPQAA+KYWAPHP TGVFGP  D P A A +RA DGG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG

Query:  NHGAADEEKAWFRPTSLEDSEKPHGF
        NH AA+EEKAWFRPTSLEDSEKPHGF
Subjt:  NHGAADEEKAWFRPTSLEDSEKPHGF

A0A6J1FT47 late embryogenesis abundant protein At5g17165-like isoform X2

2.7e-51

84.92

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG
        MAANSRSAGAIAGLGKRITNQIWTSDSAISSSAL F RA H+  YDKNPDE VRPSIVPDDVIQPQAA+KYWAPHP TGVFGP  D P A A +RA DGG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG

Query:  NHGAADEEKAWFRPTSLEDSEKPHGF
        NH AA+EEKAWFRPTSLEDSEKPHGF
Subjt:  NHGAADEEKAWFRPTSLEDSEKPHGF

A0A6J1JRN3 late embryogenesis abundant protein At5g17165-like isoform X1

1.0e-50

83.33

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG
        MAANSRSAGAIAGLGKRITNQI TSDSAISSSAL FRRA H+  YDKNPDE VRPSIVPDDVIQPQAA+KYWAPHP TGVFGP  + P A  A RA DGG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG

Query:  NHGAADEEKAWFRPTSLEDSEKPHGF
        NH A +EEKAWFRPTSLEDSEKPHGF
Subjt:  NHGAADEEKAWFRPTSLEDSEKPHGF

A0A6J1JSV5 late embryogenesis abundant protein At5g17165-like isoform X2

9.7e-49

82.54

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG
        MAANSRSAGAIAGLGKRITNQI TSDSAISSSAL F RA H+  YDKNPDE VRPSIVPDDVIQPQAA+KYWAPHP TGVFGP  + P A  A RA DGG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHP-AGAANRATDGG

Query:  NHGAADEEKAWFRPTSLEDSEKPHGF
        NH A +EEKAWFRPTSLEDSEKPHGF
Subjt:  NHGAADEEKAWFRPTSLEDSEKPHGF

SwissProt top hits

e value

%identity

Alignment

F4KFM8 Late embryogenesis abundant protein At5g17165

3.8e-18

45.24

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHPAGAANRATD---
        MAA S++   I  +G+ I N +    S   +  L   R  H+  YDKN +E ++PS VPD++I+P  +DKYW+PHPQTGVFG     P+ ++  A D   
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHPAGAANRATD---

Query:  GGNHGAADEEKAWFRPTSLEDSEKPH
        GG   +  EEKAWFRPTSLED +K H
Subjt:  GGNHGAADEEKAWFRPTSLEDSEKPH

Arabidopsis top hits

e value

%identity

Alignment

AT3G03150.1 unknown protein

3.2e-20

48.33

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Query:  SRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGP-VTDHPAGAANRATDGGNHGA
        S+S   I  L K + N    S  A +S+    RR+ HS  YDKN ++ +  S VPD+VI+P  +DKYW+PHP+TGVFGP  T+H A A     D     A
Subjt:  SRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGP-VTDHPAGAANRATDGGNHGA

Query:  ADEEKAWFRPTSLEDSEKPH
          EE AWFRPTSLEDS+K H
Subjt:  ADEEKAWFRPTSLEDSEKPH

AT5G17165.1 unknown protein

2.7e-19

45.24

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Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHPAGAANRATD---
        MAA S++   I  +G+ I N +    S   +  L   R  H+  YDKN +E ++PS VPD++I+P  +DKYW+PHPQTGVFG     P+ ++  A D   
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHPAGAANRATD---

Query:  GGNHGAADEEKAWFRPTSLEDSEKPH
        GG   +  EEKAWFRPTSLED +K H
Subjt:  GGNHGAADEEKAWFRPTSLEDSEKPH

Sequences

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CDS sequence

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ATGGCCGCTAATTCGAGAAGTGCAGGAGCGATCGCCGGCTTGGGAAAACGAATCACCAACCAGATCTGGACCAGCGATTCTGCGATCTCTTCATCTGCTCTGAATTTCAG
GAGAGCAACTCACTCTGTAGTATATGACAAGAACCCGGACGAACACGTCCGACCAAGCATAGTTCCGGATGATGTGATTCAGCCTCAGGCTGCCGATAAATATTGGGCTC
CTCATCCACAGACCGGCGTTTTCGGGCCAGTCACCGACCACCCTGCAGGAGCAGCAAACCGTGCTACAGACGGTGGCAACCACGGTGCTGCAGACGAGGAAAAGGCTTGG
TTCCGACCAACGAGTCTGGAGGATTCCGAGAAGCCCCATGGGTTCTAG

mRNA sequence

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GAAAAGCTTTGTCGGTTTTTGGCGGGTACAATACGACGCCGTACTGGCGCGCTATAAAACGAGGATTAGCCACAGACGATTGAGAATCGAGAATCAAAAGCAATTAATCG
CCGTTTTTCTTCTTCATCTCTCTCTCTGATTCTTCGTTTTTGTTTTCTTGTTCTTACGGAGTTCGAATTGTATGGCCGCTAATTCGAGAAGTGCAGGAGCGATCGCCGGC
TTGGGAAAACGAATCACCAACCAGATCTGGACCAGCGATTCTGCGATCTCTTCATCTGCTCTGAATTTCAGGAGAGCAACTCACTCTGTAGTATATGACAAGAACCCGGA
CGAACACGTCCGACCAAGCATAGTTCCGGATGATGTGATTCAGCCTCAGGCTGCCGATAAATATTGGGCTCCTCATCCACAGACCGGCGTTTTCGGGCCAGTCACCGACC
ACCCTGCAGGAGCAGCAAACCGTGCTACAGACGGTGGCAACCACGGTGCTGCAGACGAGGAAAAGGCTTGGTTCCGACCAACGAGTCTGGAGGATTCCGAGAAGCCCCAT
GGGTTCTAGGAGCTGGAGCTTCTATTCTGCTATCTATTTTAATGCATTGTTATGTTTTTGGCCATCGGACAATAAATTAAAAAGAAAAAAAAAGATGGTTGTTTTCTTTG
TTGGACTAATGGTTTGGGATTTTGAGTTGCTGAAGGCTGAGGCAACCTGGCTTAAGCATGCTTTGGCTTGTTATACGGTATTGTAGCAACTTTATCGTGGGGTTGGATGT
TTTAATGTTCTCGTTTGTCTAATTAAAGTAAACTTGAGACAGCATCTAAACTAGAATTTAATCATCATGATTTTAAAAATTAGAACCTTGTTTAATGATTTGATA

Protein sequence

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MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALNFRRATHSVVYDKNPDEHVRPSIVPDDVIQPQAADKYWAPHPQTGVFGPVTDHPAGAANRATDGGNHGAADEEKAW
FRPTSLEDSEKPHGF

Sed0022386 (gene) of Chayote v1 genome