CuGenDBv2

Gene ID	Sed0022394
Organism	Sechium edule (Chayote v1)
Description	Filamentous hemagglutinin transporter
Genome location	LG05:31904864..31905719
RNA-Seq Expression	Sed0022394
Synteny	Sed0022394
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004139833.1 uncharacterized protein LOC101214550 [Cucumis sativus]

4.1e-69

66.39

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Query:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------
        MAAEVSSL RV    +D+DNRTA+G+GQ S A VTRDLLGQ SNL  +SQELDL+L+VPTGWEKRLDLKSGKVYIQRSQTPDSPLNS+SK          
Subjt:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------

Query:  ------FPKSPSKRTLNLFDETSLDLKL---PPFTNYASVCTLDKVKSALARADKGLITKR--------SPS-----------------------SSAAP
              FP SPSKRTLNLF+ETSLDLKL   P  TNYASVCTLDKVKSAL RADK L+ KR        SPS                       +SAAP
Subjt:  ------FPKSPSKRTLNLFDETSLDLKL---PPFTNYASVCTLDKVKSALARADKGLITKR--------SPS-----------------------SSAAP

Query:  TAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI
         AVGCPGCLSYV+VMKNNP CPRC+SVVPLPTIKKPRIDLNMSI
Subjt:  TAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

XP_008447115.1 PREDICTED: uncharacterized protein LOC103489640 [Cucumis melo]

1.2e-68

65.98

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Query:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------
        MAAEVSSL RV    +++DNRTA+G+GQ S A VTRDLLGQ SNL  +SQELDL+L+VPTGWEKRLDLKSGKVYIQRSQTPDSPLNS+SK          
Subjt:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------

Query:  ------FPKSPSKRTLNLFDETSLDLKL----PPFTNYASVCTLDKVKSALARADKGLITKR--------SPS----------------------SSAAP
              FP SPSKRTLNLF+ETSLDLKL     P TNYASVCTLDKVKSAL RADK L+ KR        SPS                      +SAAP
Subjt:  ------FPKSPSKRTLNLFDETSLDLKL----PPFTNYASVCTLDKVKSALARADKGLITKR--------SPS----------------------SSAAP

Query:  TAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI
         AVGCPGCLSYV+VMKNNP CPRC+SVVPLPTIKKPRIDLNMSI
Subjt:  TAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

XP_022930640.1 uncharacterized protein LOC111437042 [Cucurbita moschata]

1.4e-64

65.95

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Query:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------
        MAA+VSSL RV    +D+DNR A+   ++S A  TRDLLGQ SNL A+SQELDL+L+VP+GWEKRLDLKSGKVYIQRSQTPDSPLNS+SK          
Subjt:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------

Query:  ------FPKSPSKRTLNLFDETSLDLKLPPFTNYASVCTLDKVKSALARADKGLITKR-----SPSS-----------------SAAPTAVGCPGCLSYV
              FP SPSKRTLNLF+ETSLDL L   TNYASVCTLDKVKSAL RADK LI KR     SPSS                 SAAP AVGCPGCLSYV
Subjt:  ------FPKSPSKRTLNLFDETSLDLKLPPFTNYASVCTLDKVKSALARADKGLITKR-----SPSS-----------------SAAPTAVGCPGCLSYV

Query:  MVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI
        +V KNNP CPRC+SVVPLP+IKKPRIDLN+SI
Subjt:  MVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

XP_022989226.1 uncharacterized protein LOC111486368 [Cucurbita maxima]

4.7e-65

66.38

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Query:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------
        MAA+VSSL RV    +D+DNR A+   ++S A  TRDLLGQ SNL A+SQELDL+L+VP+GWEKRLDLKSGKVYIQRSQTPDSPLNSESK          
Subjt:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------

Query:  ------FPKSPSKRTLNLFDETSLDLKLPPFTNYASVCTLDKVKSALARADKGLITKR-----SPSS-----------------SAAPTAVGCPGCLSYV
              FP SPSKRTLNLF+ETSLDL L   TNYASVCTLDKVKSAL RADK LI KR     SPSS                 SAAP AVGCPGCLSYV
Subjt:  ------FPKSPSKRTLNLFDETSLDLKLPPFTNYASVCTLDKVKSALARADKGLITKR-----SPSS-----------------SAAPTAVGCPGCLSYV

Query:  MVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI
        +V KNNP CPRC+SVVPLP+IKKPRIDLN+SI
Subjt:  MVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

XP_038887388.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120077543 [Benincasa hispida]

9.1e-69

70.74

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Query:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------
        MAAEVSSL RV    +DEDNRTA+G+GQ+S A VTRDLLGQ SNL  +SQELDL+L+VPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK          
Subjt:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------

Query:  ------FPKSPSKRTLNLFDETSLDLKL--PPFTNYA-SVCTLDKVKSALARADKGLITKR-SPSS---------------SAAPTAVGCPGCLSYVMVM
              FP SPSKRTLNL +ETSLDLKL   P TN   SVCTLDKVKSAL RADK L+ KR SPSS               SAAP AVGCPGCLSYV+VM
Subjt:  ------FPKSPSKRTLNLFDETSLDLKL--PPFTNYA-SVCTLDKVKSALARADKGLITKR-SPSS---------------SAAPTAVGCPGCLSYVMVM

Query:  KNNPYCPRCHSVVPLPTIKKPRIDLNMSI
        KNNP CPRC+SVVPLPTIKKPRIDLNMSI
Subjt:  KNNPYCPRCHSVVPLPTIKKPRIDLNMSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K3J9 Uncharacterized protein

2.0e-69

66.39

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Query:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------
        MAAEVSSL RV    +D+DNRTA+G+GQ S A VTRDLLGQ SNL  +SQELDL+L+VPTGWEKRLDLKSGKVYIQRSQTPDSPLNS+SK          
Subjt:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------

Query:  ------FPKSPSKRTLNLFDETSLDLKL---PPFTNYASVCTLDKVKSALARADKGLITKR--------SPS-----------------------SSAAP
              FP SPSKRTLNLF+ETSLDLKL   P  TNYASVCTLDKVKSAL RADK L+ KR        SPS                       +SAAP
Subjt:  ------FPKSPSKRTLNLFDETSLDLKL---PPFTNYASVCTLDKVKSALARADKGLITKR--------SPS-----------------------SSAAP

Query:  TAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI
         AVGCPGCLSYV+VMKNNP CPRC+SVVPLPTIKKPRIDLNMSI
Subjt:  TAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

A0A1S3BGM6 uncharacterized protein LOC103489640

5.7e-69

65.98

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Query:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------
        MAAEVSSL RV    +++DNRTA+G+GQ S A VTRDLLGQ SNL  +SQELDL+L+VPTGWEKRLDLKSGKVYIQRSQTPDSPLNS+SK          
Subjt:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------

Query:  ------FPKSPSKRTLNLFDETSLDLKL----PPFTNYASVCTLDKVKSALARADKGLITKR--------SPS----------------------SSAAP
              FP SPSKRTLNLF+ETSLDLKL     P TNYASVCTLDKVKSAL RADK L+ KR        SPS                      +SAAP
Subjt:  ------FPKSPSKRTLNLFDETSLDLKL----PPFTNYASVCTLDKVKSALARADKGLITKR--------SPS----------------------SSAAP

Query:  TAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI
         AVGCPGCLSYV+VMKNNP CPRC+SVVPLPTIKKPRIDLNMSI
Subjt:  TAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

A0A6J1EXD9 uncharacterized protein LOC111437042

6.6e-65

65.95

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Query:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------
        MAA+VSSL RV    +D+DNR A+   ++S A  TRDLLGQ SNL A+SQELDL+L+VP+GWEKRLDLKSGKVYIQRSQTPDSPLNS+SK          
Subjt:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------

Query:  ------FPKSPSKRTLNLFDETSLDLKLPPFTNYASVCTLDKVKSALARADKGLITKR-----SPSS-----------------SAAPTAVGCPGCLSYV
              FP SPSKRTLNLF+ETSLDL L   TNYASVCTLDKVKSAL RADK LI KR     SPSS                 SAAP AVGCPGCLSYV
Subjt:  ------FPKSPSKRTLNLFDETSLDLKLPPFTNYASVCTLDKVKSALARADKGLITKR-----SPSS-----------------SAAPTAVGCPGCLSYV

Query:  MVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI
        +V KNNP CPRC+SVVPLP+IKKPRIDLN+SI
Subjt:  MVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

A0A6J1HWE1 uncharacterized protein LOC111468450

2.1e-63

61.75

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Query:  MAAEVSSLNRV------QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK--------
        MAA+VSSL RV       DEDNRT +G+GQ+    VTRDLLGQ SNLAA SQELDL+L+VP+GWEKRLDLKSGKVYIQRSQTPDSPLNS+SK        
Subjt:  MAAEVSSLNRV------QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK--------

Query:  --------FPKSPSKRTLNLFDETSLDLKL--------PPFTNYASVCTLDKVKSALARADKGLITKR--------SPSSS-------------------
                FP SPSKRTLNLF+ETSLDLKL         P TNYASVCTLDKVKSAL RADK L+ KR        SPS S                   
Subjt:  --------FPKSPSKRTLNLFDETSLDLKL--------PPFTNYASVCTLDKVKSALARADKGLITKR--------SPSSS-------------------

Query:  ----AAPTAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI
            AAP AVGC GCLSYV+V KNNP CPRC+SVVPL ++KKPRIDLNMSI
Subjt:  ----AAPTAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

A0A6J1JJG7 uncharacterized protein LOC111486368

2.3e-65

66.38

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Query:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------
        MAA+VSSL RV    +D+DNR A+   ++S A  TRDLLGQ SNL A+SQELDL+L+VP+GWEKRLDLKSGKVYIQRSQTPDSPLNSESK          
Subjt:  MAAEVSSLNRV----QDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESK----------

Query:  ------FPKSPSKRTLNLFDETSLDLKLPPFTNYASVCTLDKVKSALARADKGLITKR-----SPSS-----------------SAAPTAVGCPGCLSYV
              FP SPSKRTLNLF+ETSLDL L   TNYASVCTLDKVKSAL RADK LI KR     SPSS                 SAAP AVGCPGCLSYV
Subjt:  ------FPKSPSKRTLNLFDETSLDLKLPPFTNYASVCTLDKVKSALARADKGLITKR-----SPSS-----------------SAAPTAVGCPGCLSYV

Query:  MVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI
        +V KNNP CPRC+SVVPLP+IKKPRIDLN+SI
Subjt:  MVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G16500.1 unknown protein

6.8e-38

42.47

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Query:  MAAEVSSLNRV--QDEDNRTAVGSGQKSRAPV---TRDLLGQFSNLAA------ESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDS----------
        MAA+VSSL R+  + +D+RT V      R+ V   TRDLLG    +        +S ELDL+++VP GWEKRLDLKSGKVY+Q+     S          
Subjt:  MAAEVSSLNRV--QDEDNRTAVGSGQKSRAPV---TRDLLGQFSNLAA------ESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDS----------

Query:  --------------PLNSESKFPKSPSKRTLNLF---DETSLDLKL----------PPFTNY---------ASVCTLDKVKSALARADKGLITKRSPSS-
                       LN      K P+K  L+LF   D+TSL+LKL          PP +++         +SVCTLDKVK AL RA+K    ++SP   
Subjt:  --------------PLNSESKFPKSPSKRTLNLF---DETSLDLKL----------PPFTNY---------ASVCTLDKVKSALARADKGLITKRSPSS-

Query:  -----------SAAPTAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI
                   +A+  A GCPGCLSYV V KNNP CPRCHS VPLP +KKP+IDLN+S+
Subjt:  -----------SAAPTAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

AT1G79160.1 unknown protein

6.1e-39

48.09

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Query:  MAAEVSSLNRVQD--EDNRTAV--GSGQKSRAP-VTRDLLGQFSNLAAE-SQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDS-------------PL
        MAA+VSSL R+    +D+R  V   +G KS A  +TRDLLG       + S ELDL+L+VPTG+EKRLDLKSGKVY+QR  +  S             P 
Subjt:  MAAEVSSLNRVQD--EDNRTAV--GSGQKSRAP-VTRDLLGQFSNLAAE-SQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDS-------------PL

Query:  NSESKFPKSPSKRT--LNLFDETSLDLKL--------PPFTNYASVCTLDKVKSALARA--DKGLITKR-SPSSS----------AAPTAVGCPGCLSYV
          +  FP      +  LNLFD+T+ +LKL        P  +N  SVCTLDKVKSAL RA  D  +  KR SP  +          A+P   GCPGCLSYV
Subjt:  NSESKFPKSPSKRT--LNLFDETSLDLKL--------PPFTNYASVCTLDKVKSALARA--DKGLITKR-SPSSS----------AAPTAVGCPGCLSYV

Query:  MVMKNNPYCPRCHSVVPLPT---IKKPRIDLNMSI
        +VM NNP CPRC ++VPLPT    KKP+IDLN+SI
Subjt:  MVMKNNPYCPRCHSVVPLPT---IKKPRIDLNMSI

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTGCCGAAGTGAGTAGTCTGAACCGGGTTCAGGACGAAGATAATCGGACGGCGGTGGGCAGTGGGCAGAAATCAAGGGCTCCGGTTACACGCGATTTGCTAGGCCA
ATTTTCAAACCTAGCCGCCGAGTCTCAGGAATTAGACCTGGAATTGCGAGTTCCCACCGGCTGGGAGAAACGCCTTGACTTGAAGTCGGGAAAAGTTTACATACAGAGAA
GTCAAACTCCAGATTCTCCACTGAATTCAGAATCCAAATTCCCAAAATCTCCCTCAAAACGAACGTTAAATCTCTTCGATGAAACCAGCCTGGATTTGAAATTGCCGCCG
TTCACCAATTACGCCTCCGTTTGTACTCTGGATAAGGTCAAATCTGCTTTGGCAAGGGCCGACAAGGGGCTCATTACAAAAAGGTCGCCGTCGTCATCGGCGGCGCCAAC
GGCGGTGGGTTGTCCTGGATGCTTATCTTATGTCATGGTAATGAAAAACAATCCTTATTGTCCTCGTTGCCATTCTGTTGTTCCATTGCCCACCATCAAGAAACCTCGGA
TTGATCTAAACATGTCCATATAA

mRNA sequence

Show/hide mRNA sequence

GGAGTAGTAGTCATTGGGCATTAAATGCCTCAATTAAGTTCATAACGGCGTGGCAATGATATTTAACTTGATAAACTTTAGTCTTATATTTTGCCTACTCCTCTCTCTCT
CTTTTTCCAACTGCTTATTTTTATCAGAGAGAAAAAAAAAAAAAAAAAACCAAATCAAGTAAAGGTCCAAAAATGGCTGCCGAAGTGAGTAGTCTGAACCGGGTTCAGGA
CGAAGATAATCGGACGGCGGTGGGCAGTGGGCAGAAATCAAGGGCTCCGGTTACACGCGATTTGCTAGGCCAATTTTCAAACCTAGCCGCCGAGTCTCAGGAATTAGACC
TGGAATTGCGAGTTCCCACCGGCTGGGAGAAACGCCTTGACTTGAAGTCGGGAAAAGTTTACATACAGAGAAGTCAAACTCCAGATTCTCCACTGAATTCAGAATCCAAA
TTCCCAAAATCTCCCTCAAAACGAACGTTAAATCTCTTCGATGAAACCAGCCTGGATTTGAAATTGCCGCCGTTCACCAATTACGCCTCCGTTTGTACTCTGGATAAGGT
CAAATCTGCTTTGGCAAGGGCCGACAAGGGGCTCATTACAAAAAGGTCGCCGTCGTCATCGGCGGCGCCAACGGCGGTGGGTTGTCCTGGATGCTTATCTTATGTCATGG
TAATGAAAAACAATCCTTATTGTCCTCGTTGCCATTCTGTTGTTCCATTGCCCACCATCAAGAAACCTCGGATTGATCTAAACATGTCCATATAA

Protein sequence

Show/hide protein sequence

MAAEVSSLNRVQDEDNRTAVGSGQKSRAPVTRDLLGQFSNLAAESQELDLELRVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSESKFPKSPSKRTLNLFDETSLDLKLPP
FTNYASVCTLDKVKSALARADKGLITKRSPSSSAAPTAVGCPGCLSYVMVMKNNPYCPRCHSVVPLPTIKKPRIDLNMSI

Sed0022394 (gene) of Chayote v1 genome