CuGenDBv2

Gene ID	Sed0022395
Organism	Sechium edule (Chayote v1)
Description	Tetratricopeptide repeat-like superfamily protein, putative
Genome location	LG12:33634450..33635503
RNA-Seq Expression	Sed0022395
Synteny	Sed0022395
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6589844.1 hypothetical protein SDJN03_15267, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-121

79.54

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Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS
        M++RS STPLLNSWLHHSRDSS E EIVH +P+SRSIVF + SPSC SPIIDDSPR++TRALSETDLRDLS+++TKPF R L GFSE+AEET    F  S
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS

Query:  KTASLSCGSISEMG--------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQ
        +  SLSCGSISE G        VLVGGGVGGSGG I+ GGGGGSDGG+DG FG GDSNHGNESTDLYY+KMIEANPGNSMLLSNYARFLKEVRGDLVKAQ
Subjt:  KTASLSCGSISEMG--------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQ

Query:  EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDA-DEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLA
        EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESY NQAVKAAP+DCYVLASYARFLWDA +EEEEEEEEEEE   + L E+ A+ FFQGVH PPP+A
Subjt:  EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDA-DEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLA

Query:  AAS
        AAS
Subjt:  AAS

XP_008443988.1 PREDICTED: uncharacterized protein LOC103487441 [Cucumis melo]

4.8e-122

81.13

Show/hide

Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS
        MI+RS STPLLNSWLHHSRDSS EPEIV++IP+SRSI+  + SPSC SPIIDD PR++TR LSETDL+DLSM K KPF R L GFSE+AEET    FS S
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS

Query:  KTASLSCGSISEMG-------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQE
        KTASLSCGSISE G       VLVGGGVGGSGGRI+  GGGGSDGG+D  FG GDSNHGNESTDLYY+KMIEANPGNSMLLSNYARFLKEVRGDLVKAQE
Subjt:  KTASLSCGSISEMG-------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQE

Query:  YCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDAD-EEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA
        YCGRAIL+NP DGNVLSMYADLIWETQKDSPRAESYFNQAVKAAP+DCYVLASYARFLWDAD EEEEEEEEEEEVG +   EK A+SFFQGV +PPPLAA
Subjt:  YCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDAD-EEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA

Query:  AS
        AS
Subjt:  AS

XP_023515706.1 uncharacterized protein LOC111779789 isoform X6 [Cucurbita pepo subsp. pepo]

1.1e-121

80.46

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Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS
        M++RS STPLLNSWLHHSRDSS E EIVH IP+SRSIVF + SPSC SPIIDDSPR++TRALSETDLRDLS+ +TKPF R L GFSE+AEET    FS S
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS

Query:  KTASLSCGSISEMG--------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQ
        +  SLSCGSISE G        VLVGGGVGGSGGRI+  GGGGSDGG+DG FG GDSNHGNESTDLYY+KMIEANPGNSMLLSNYARFLKEVRGDLVKAQ
Subjt:  KTASLSCGSISEMG--------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQ

Query:  EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA
        EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESY NQAVKAAP+DCYVLASYARFLWDA+EEEEEEEEEEE     L E+ A+ FFQGVH PPP+AA
Subjt:  EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA

Query:  AS
        AS
Subjt:  AS

XP_031744467.1 uncharacterized protein LOC101218093 [Cucumis sativus]

4.8e-122

81.4

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Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS
        MI+RS STPLLNSWLHHSRDSS EPEIVH+IP+SRSI+  + SPSC SPIIDDSPR++TR LSETDL+DLSM K KPF R L GFSE+AEET    FS S
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS

Query:  KTASLSCGSISEMG-------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQE
        KTASLSCGSISE G       VLVGGGVGGSGGRI+  GGGGSDGG+D  FG GDSN GNESTDLYY+KMIEANPGNSMLLSNYARFLKEVRGDLVKAQE
Subjt:  KTASLSCGSISEMG-------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQE

Query:  YCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAAA
        YCGRAIL+NP DGNVLSMYADLIWETQKDSPRAESYFNQAVKAAP+DCYVLASYARFLWDA EEEEEEEEEEEVG +   EK A+SFFQGV +PPPLAAA
Subjt:  YCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAAA

Query:  S
        S
Subjt:  S

XP_038878941.1 uncharacterized protein LOC120071028 [Benincasa hispida]

5.2e-124

80.92

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Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS
        MI+RS STPLLNSWLHHSRDSS EPEIVH+IP+SRSI+  + SPSC SPIIDDSPR++TR LSETDLRDLSM+K KPF R L GF+EV EET    FSRS
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS

Query:  KTASLSCGSISEMG----------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVK
        KTASLSCGSISE G          VLVGGGVGGSGGRI+  GGGGSDGG+DG  G GDSNHGNESTDLYY+KMIEANPGNSMLLSNYARFLKEVRGDLVK
Subjt:  KTASLSCGSISEMG----------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVK

Query:  AQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPL
        AQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAP+DCYVLASYARFLWDA     EEEEEEEVG +   EK A+SFFQGVH PPPL
Subjt:  AQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPL

Query:  AAAS
        AAAS
Subjt:  AAAS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BA31 uncharacterized protein LOC103487441

2.3e-122

81.13

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Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS
        MI+RS STPLLNSWLHHSRDSS EPEIV++IP+SRSI+  + SPSC SPIIDD PR++TR LSETDL+DLSM K KPF R L GFSE+AEET    FS S
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS

Query:  KTASLSCGSISEMG-------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQE
        KTASLSCGSISE G       VLVGGGVGGSGGRI+  GGGGSDGG+D  FG GDSNHGNESTDLYY+KMIEANPGNSMLLSNYARFLKEVRGDLVKAQE
Subjt:  KTASLSCGSISEMG-------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQE

Query:  YCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDAD-EEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA
        YCGRAIL+NP DGNVLSMYADLIWETQKDSPRAESYFNQAVKAAP+DCYVLASYARFLWDAD EEEEEEEEEEEVG +   EK A+SFFQGV +PPPLAA
Subjt:  YCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDAD-EEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA

Query:  AS
        AS
Subjt:  AS

A0A5A7U9I5 Putative Tetratricopeptide repeat-like superfamily protein

2.3e-122

81.13

Show/hide

Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS
        MI+RS STPLLNSWLHHSRDSS EPEIV++IP+SRSI+  + SPSC SPIIDD PR++TR LSETDL+DLSM K KPF R L GFSE+AEET    FS S
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS

Query:  KTASLSCGSISEMG-------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQE
        KTASLSCGSISE G       VLVGGGVGGSGGRI+  GGGGSDGG+D  FG GDSNHGNESTDLYY+KMIEANPGNSMLLSNYARFLKEVRGDLVKAQE
Subjt:  KTASLSCGSISEMG-------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQE

Query:  YCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDAD-EEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA
        YCGRAIL+NP DGNVLSMYADLIWETQKDSPRAESYFNQAVKAAP+DCYVLASYARFLWDAD EEEEEEEEEEEVG +   EK A+SFFQGV +PPPLAA
Subjt:  YCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDAD-EEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA

Query:  AS
        AS
Subjt:  AS

A0A6J1EV56 uncharacterized protein LOC111436230

4.4e-121

80.79

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Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS
        MI+RS STPL NSWLHHSRDS  EPEIV++IPR+RSIV C  SPSC SPIIDDSPRK+TRALSETDLRD+SMNK KPF R L GFSEV EET    FSRS
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS

Query:  KTASLSCGSISEMG--------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQ
         TASL   SISE G        VLVGGGVGGSGGRI   GGGGSDGG+DG FG+GDSNHGN++TDL+Y+KMIEANPGNSMLL NYARFLKEVRGDLVKAQ
Subjt:  KTASLSCGSISEMG--------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQ

Query:  EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA
        EYCGRAILSNPGDGNVLSMYADLIWETQKD+PRAESYFNQAV+AAPDDCYVLASYARFLWDA+E+EEEEEEEEE   D L EK A+SFFQGVHTPPPLAA
Subjt:  EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA

Query:  AS
        AS
Subjt:  AS

A0A6J1H8I4 uncharacterized protein LOC111461520 isoform X2

5.8e-121

79.47

Show/hide

Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS
        M++RS STPLLNSWLHHSRDSS E EIVH IP+SRSIVF + SPSC SPIIDDSPR++TRALSETDLRDLS+++TKPF R L GFSE+AEET    FS S
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS

Query:  KTASLSCGSISEMG--------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQ
        +  SLSCGSISE G        VLVGGGVG SGG I+ GGGGGSDGG+DG FG GDSNHGNESTDLYY+KMIEANPGNSMLLSNYARFLKEVRGDLVKAQ
Subjt:  KTASLSCGSISEMG--------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQ

Query:  EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA
        EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESY NQAVKAAP+DCYVLASYARFLWDA+EEEEE+EE+EE   + L E+ A+ FFQGVH PPP+AA
Subjt:  EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAA

Query:  AS
        AS
Subjt:  AS

A0A6J1H8P6 uncharacterized protein LOC111461520 isoform X1

1.4e-119

79.21

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Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS
        M++RS STPLLNSWLHHSRDSS E EIVH IP+SRSIVF + SPSC SPIIDDSPR++TRALSETDLRDLS+++TKPF R L GFSE+AEET    FS S
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEET----FSRS

Query:  KTASLSCGSISEMG--------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQ
        +  SLSCGSISE G        VLVGGGVG SGG I+ GGGGGSDGG+DG FG GDSNHGNESTDLYY+KMIEANPGNSMLLSNYARFLKEVRGDLVKAQ
Subjt:  KTASLSCGSISEMG--------VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQ

Query:  EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDC-YVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLA
        EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESY NQAVKAAP+DC YVLASYARFLWDA+EEEEE+EE+EE   + L E+ A+ FFQGVH PPP+A
Subjt:  EYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDC-YVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLA

Query:  AAS
        AAS
Subjt:  AAS

SwissProt top hits

e value

%identity

Alignment

Q4WT84 Pre-mRNA-splicing factor clf1

7.3e-04

33.58

Show/hide

Query:  YRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFN------QAVKAAPDDCYVLASYARFLWD
        Y K IE NP NS     YA  L+    D  +A     RAI     D  +L M  +L+W+   D    E  ++      + +    D   V  +YARF  +
Subjt:  YRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFN------QAVKAAPDDCYVLASYARFLWD

Query:  ADEEEEEEEEEEEVGRDCLGE--KAASSFFQGVH
          EEEEEEEEEEE  R    E  + A + F+  H
Subjt:  ADEEEEEEEEEEEVGRDCLGE--KAASSFFQGVH

Arabidopsis top hits

e value

%identity

Alignment

AT1G04530.1 Tetratricopeptide repeat (TPR)-like superfamily protein

3.3e-20

41.86

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Query:  GLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVL
        G  D N G+     YY+ M+E  P + +LL NYA+FL E +GDL  A+EY  +  +  P DG  L+ Y  L+ +  +D  +A SYF +AV+A+PDD  VL
Subjt:  GLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVL

Query:  ASYARFLW----DADEEEEEEEEEEEVGR
        A+YA FLW    D D+E+++E+++E  G+
Subjt:  ASYARFLW----DADEEEEEEEEEEEVGR

AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.3e-48

40.62

Show/hide

Query:  MIMRSPSTPLLNSWL--HHSRDSSQEPE-------------------------IVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMN
        M++RS S P+LNSWL  H SR+SS EPE                         +   +  ++ I+   S  +  S     S R+   +L ET     +++
Subjt:  MIMRSPSTPLLNSWL--HHSRDSSQEPE-------------------------IVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMN

Query:  KTKPF-CRNLCGFSEVAEETFSRSKTASLSCGSISEMGVLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSN
        ++ PF    L   S   ++  S  +  +L  G         GGG+GGSGG I  GGGG    G DG           ++TD YYR+MI++NPGNS+L  N
Subjt:  KTKPF-CRNLCGFSEVAEETFSRSKTASLSCGSISEMGVLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSN

Query:  YARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEE--EEEEVGRDCLGE
        YA+FLKEV+GD+ KA+EYC RAIL N  DGNVLS+YADLI    +D  RA SY+ QAVK +P+DCYV ASYARFLWD DE+EE+E   EEEE   D  G 
Subjt:  YARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEE--EEEEVGRDCLGE

Query:  KAASSFFQGVHTPPPLAAAS
           ++ F+       + A+S
Subjt:  KAASSFFQGVHTPPPLAAAS

AT4G17940.1 Tetratricopeptide repeat (TPR)-like superfamily protein

4.3e-36

40.44

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Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFS----PIIDDSPRKMTRALSETDL----RDLSMNKTKPFCRNLCGFSEVAEE-
        ++MR+ S P+L + L     S +    +  I R+ S+   +S    F+     I   +   M R LSE+D+    R L    +KP    +    E  EE 
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFS----PIIDDSPRKMTRALSETDL----RDLSMNKTKPFCRNLCGFSEVAEE-

Query:  -TFSRSKTASLSCGSISEMGVLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEY
          F+    + +S G   E     GGGVGG  G   GG G G  GG +    +GD          YYR+M+ +NP NS+LL NY +FL EV  D   A+EY
Subjt:  -TFSRSKTASLSCGSISEMGVLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEY

Query:  CGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEE
         GRAIL NPGDG  LSMY  LIWET++D  RA+ YF+QAV A+P+DC VL SYARF+W+A+++++++EEEEE
Subjt:  CGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEE

AT4G32340.1 Tetratricopeptide repeat (TPR)-like superfamily protein

3.7e-35

41.83

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Query:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEETFSRSKTAS
        MIMRS S+  LN        ++Q+P +   +  +R++    ++P    PI        TRA S+ +L  +                   +   S +KT S
Subjt:  MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEETFSRSKTAS

Query:  LSCGSISEMGVLVGGGV--GGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSN
        +     + + VL G  +  GGS G   G GG G+ GG  G         G  S D YY +MI+  PG+++LLSNYARFLKEV+GD  KA+EYC RA+LS 
Subjt:  LSCGSISEMGVLVGGGV--GGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSN

Query:  PG-DGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEE
         G DG +LSMY DLIW+   D  RA+SY++QAV+++PDDC VLASYARFLWDA+EE EEEE +
Subjt:  PG-DGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEE

AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.9e-60

52.15

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Query:  MIMRSPSTPLLNSWLHHS--RDSSQEP-EIVHRIPRSRSIVFCNSSPS-CFSPI----IDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCG--FSEVAE
        M++RS STPLLNS +H S  RDS  E  E VH+I R RSI    SS S C+SP+     DDS R+M R  S++DLR L+  K  P  + L G    E  +
Subjt:  MIMRSPSTPLLNSWLHHS--RDSSQEP-EIVHRIPRSRSIVFCNSSPS-CFSPI----IDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCG--FSEVAE

Query:  ETFSRSKTASLSCGSIS---EMGVLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKA
        E        + S   IS   +    V G  GG GG  +GGG G S G +DG    GD   G+++TD++YRKMIEANPGN + LSNYA+FLKEVR D +KA
Subjt:  ETFSRSKTASLSCGSIS---EMGVLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKA

Query:  QEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLA
        +EYCGRAIL +P DGNVL+MYA+L+W+  KDS RAE+YFNQAV AAP+DCYV ASYARFLWDA EEEEEEE+EE    +   + +  +FF G   P P+ 
Subjt:  QEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLA

Query:  AAS
        A S
Subjt:  AAS

Sequences

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CDS sequence

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ATGATTATGAGAAGCCCTTCAACTCCTCTTCTCAATTCATGGCTACACCATTCAAGGGATTCTTCTCAGGAGCCCGAAATCGTGCACCGAATCCCAAGATCGCGTTCCAT
TGTGTTCTGTAACTCCTCGCCCAGTTGCTTTTCTCCGATAATCGACGATTCGCCGAGAAAGATGACTCGGGCGCTGTCGGAGACGGATCTTCGGGACCTTTCCATGAACA
AGACGAAACCCTTTTGCAGAAATCTCTGTGGGTTTTCGGAGGTGGCCGAAGAGACGTTTAGCCGCTCCAAAACGGCGTCTTTGAGTTGTGGGTCGATTTCTGAAATGGGC
GTTTTAGTTGGTGGTGGAGTTGGTGGTAGTGGTGGAAGAATCTACGGCGGTGGCGGTGGAGGATCGGACGGTGGCAACGATGGATGTTTTGGGCTTGGAGATTCGAATCA
TGGGAATGAGAGTACGGATTTGTATTATCGGAAAATGATCGAGGCGAATCCTGGGAATTCTATGCTTTTGAGCAATTATGCGCGGTTTTTGAAAGAGGTTCGTGGGGATC
TTGTTAAAGCTCAAGAGTATTGTGGGAGAGCGATTTTGAGCAATCCTGGTGATGGTAATGTATTGTCCATGTACGCTGATTTGATATGGGAAACTCAAAAGGACTCTCCA
AGAGCTGAGAGTTACTTTAATCAAGCTGTTAAAGCTGCACCTGATGATTGTTATGTTCTAGCATCTTATGCAAGGTTTCTTTGGGATGCTGATGAAGAAGAAGAAGAAGA
AGAGGAAGAAGAGGAAGTGGGGAGAGATTGTTTAGGCGAAAAGGCGGCATCGAGCTTCTTTCAAGGAGTTCACACTCCACCTCCTCTGGCTGCTGCTTCTTAA

mRNA sequence

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Protein sequence

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MIMRSPSTPLLNSWLHHSRDSSQEPEIVHRIPRSRSIVFCNSSPSCFSPIIDDSPRKMTRALSETDLRDLSMNKTKPFCRNLCGFSEVAEETFSRSKTASLSCGSISEMG
VLVGGGVGGSGGRIYGGGGGGSDGGNDGCFGLGDSNHGNESTDLYYRKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSP
RAESYFNQAVKAAPDDCYVLASYARFLWDADEEEEEEEEEEEVGRDCLGEKAASSFFQGVHTPPPLAAAS

Sed0022395 (gene) of Chayote v1 genome