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Sed0022414 (gene) of Chayote v1 genome

Gene IDSed0022414
OrganismSechium edule (Chayote v1)
Descriptionneurogenic locus notch homolog protein 3-like
Genome locationLG09:38900689..38904302
RNA-Seq ExpressionSed0022414
SyntenySed0022414
Gene Ontology termsNA
InterPro domainsIPR000742 - EGF-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015869449.2 neurogenic locus notch homolog protein 3-like [Ziziphus jujuba]7.4e-3451.66Show/hide
Query:  VCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA
        VC+AINCGQGTCKASNAS LGFDCEC  GW+K +IG  T P C+LPNCT +FQ G GSPP  P PP    P    P+   N   C +VWCG G CV +  
Subjt:  VCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA

Query:  AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNC---GASPHRSASAS
             Y+C C +G ENL+NL  LPCF+    G  CN    G+ P  ++S S
Subjt:  AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNC---GASPHRSASAS

XP_022145504.1 uncharacterized protein LOC111014937 isoform X1 [Momordica charantia]1.1e-6669.23Show/hide
Query:  MKKGFDLCILMLISFHFFLPSSGIQNSN-ELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPP
        M+  F+  IL+LIS  FFL +S   NS+ ELVSSSS+G  VCS INCGQGTCKASNASFLGFDCECNSGWR+ +IG FT P CVLPN   +F+ GGGSP 
Subjt:  MKKGFDLCILMLISFHFFLPSSGIQNSN-ELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPP

Query:  RPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA-AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNCGASPHRSASASIPQKIG
         PPLPP+TV PFL +P GF N SACRVVWCGNGTCVAD A AAAF YSCHC +GFENLLNLTFLPCF+  YFGE C    SP R++SAS+ Q IG
Subjt:  RPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA-AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNCGASPHRSASASIPQKIG

XP_022145513.1 uncharacterized protein LOC111014937 isoform X2 [Momordica charantia]4.0e-6468.21Show/hide
Query:  MKKGFDLCILMLISFHFFLPSSGIQNSN-ELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPP
        M+  F+  IL+LIS  FFL +S   NS+ ELVSSSS+G  VCS INCGQGTCKASNASFLGFDCECNSGWR+ +IG FT P CVLPN   +F+ GGGSP 
Subjt:  MKKGFDLCILMLISFHFFLPSSGIQNSN-ELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPP

Query:  RPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA-AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNCGASPHRSASASIPQKIG
         PPLPP+TV PFL +P GF N   CRVVWCGNGTCVAD A AAAF YSCHC +GFENLLNLTFLPCF+  YFGE C    SP R++SAS+ Q IG
Subjt:  RPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA-AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNCGASPHRSASASIPQKIG

XP_035548234.1 neurogenic locus notch homolog protein 3-like [Juglans regia]3.3e-3450.32Show/hide
Query:  VCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA
        VC+ INCG+GTCKASNAS LGFDCECN GW+K ++G  T P CV+PNCT +FQ G GS   PP P    AP +  P+   N   C ++WCG+GTCV +  
Subjt:  VCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA

Query:  AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCN-CGASPHRSASASIPQKIG
             Y+C C +G +NLLNL  + CF+  Y G  CN  G  P  S+SAS P+  G
Subjt:  AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCN-CGASPHRSASASIPQKIG

XP_038899645.1 uncharacterized protein LOC120086904 [Benincasa hispida]6.0e-3672.73Show/hide
Query:  MKKGFDLCILMLISFHFFLPSSGIQNSNELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPR
        M++G  LCIL+LISF FFL +SGI N     SS+S+G+AVCS INCGQGTCKASNASFLGFDCECN GWRK +IG FT PYCVLPN T EFQSGGGSP  
Subjt:  MKKGFDLCILMLISFHFFLPSSGIQNSNELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPR

Query:  PPLPPSTVAP
        P LPP+TV P
Subjt:  PPLPPSTVAP

TrEMBL top hitse value%identityAlignment
A0A5J5BB86 Uncharacterized protein8.2e-3144.44Show/hide
Query:  LISFHFFLPSSGIQNSNELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAPF
        LISFH  L S       +L S++ +  A C++ NC +G C  S A+ LGFDCECN GW K  +GFFT+P C++PNCT  FQ G GSPP PP         
Subjt:  LISFHFFLPSSGIQNSNELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAPF

Query:  LHAPVGFLNF-SACRVVWCGNGTCVADEAAAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVC---NCGASPHRSASAS
           P+  LNF S C +VWCG+G CV +E      Y C C +G  NLL+L  LPCF+  Y G  C     G  P   ++AS
Subjt:  LHAPVGFLNF-SACRVVWCGNGTCVADEAAAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVC---NCGASPHRSASAS

A0A6J1CVF7 uncharacterized protein LOC111014937 isoform X15.4e-6769.23Show/hide
Query:  MKKGFDLCILMLISFHFFLPSSGIQNSN-ELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPP
        M+  F+  IL+LIS  FFL +S   NS+ ELVSSSS+G  VCS INCGQGTCKASNASFLGFDCECNSGWR+ +IG FT P CVLPN   +F+ GGGSP 
Subjt:  MKKGFDLCILMLISFHFFLPSSGIQNSN-ELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPP

Query:  RPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA-AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNCGASPHRSASASIPQKIG
         PPLPP+TV PFL +P GF N SACRVVWCGNGTCVAD A AAAF YSCHC +GFENLLNLTFLPCF+  YFGE C    SP R++SAS+ Q IG
Subjt:  RPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA-AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNCGASPHRSASASIPQKIG

A0A6J1CW51 uncharacterized protein LOC111014937 isoform X21.9e-6468.21Show/hide
Query:  MKKGFDLCILMLISFHFFLPSSGIQNSN-ELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPP
        M+  F+  IL+LIS  FFL +S   NS+ ELVSSSS+G  VCS INCGQGTCKASNASFLGFDCECNSGWR+ +IG FT P CVLPN   +F+ GGGSP 
Subjt:  MKKGFDLCILMLISFHFFLPSSGIQNSN-ELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPP

Query:  RPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA-AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNCGASPHRSASASIPQKIG
         PPLPP+TV PFL +P GF N   CRVVWCGNGTCVAD A AAAF YSCHC +GFENLLNLTFLPCF+  YFGE C    SP R++SAS+ Q IG
Subjt:  RPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA-AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNCGASPHRSASASIPQKIG

A0A6P3YZ54 neurogenic locus notch homolog protein 3-like3.6e-3451.66Show/hide
Query:  VCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA
        VC+AINCGQGTCKASNAS LGFDCEC  GW+K +IG  T P C+LPNCT +FQ G GSPP  P PP    P    P+   N   C +VWCG G CV +  
Subjt:  VCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA

Query:  AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNC---GASPHRSASAS
             Y+C C +G ENL+NL  LPCF+    G  CN    G+ P  ++S S
Subjt:  AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNC---GASPHRSASAS

A0A6P9EL29 neurogenic locus notch homolog protein 3-like1.6e-3450.32Show/hide
Query:  VCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA
        VC+ INCG+GTCKASNAS LGFDCECN GW+K ++G  T P CV+PNCT +FQ G GS   PP P    AP +  P+   N   C ++WCG+GTCV +  
Subjt:  VCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAPFLHAPVGFLNFSACRVVWCGNGTCVADEA

Query:  AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCN-CGASPHRSASASIPQKIG
             Y+C C +G +NLLNL  + CF+  Y G  CN  G  P  S+SAS P+  G
Subjt:  AAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCN-CGASPHRSASASIPQKIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14746.1 CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).7.6e-2135.06Show/hide
Query:  VCSAINCGQGTCKA-SNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPP--STVAPFLHAPVGFLNFSACRVVWCGNGTCVA
        +C  + CG+G CKA SN +F+ ++CEC  GW++       +P C+ PNCT +   G  + P  P PP    +  F         F  C+ + CG G C  
Subjt:  VCSAINCGQGTCKA-SNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPP--STVAPFLHAPVGFLNFSACRVVWCGNGTCVA

Query:  DEAAAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVC-NCGASPHRSASASIP
          ++  F YSC+CR+G+ NL+N+T  PC +    G  C N G     S+S+S P
Subjt:  DEAAAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVC-NCGASPHRSASASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGGCTTCGATCTCTGCATCCTCATGCTCATTTCTTTTCATTTTTTCCTTCCATCCAGTGGAATCCAGAACTCTAATGAGTTGGTTTCGAGCTCATCCCGAGG
TAGTGCTGTGTGCTCAGCCATAAATTGTGGGCAAGGAACTTGCAAGGCATCTAATGCTTCATTTCTTGGTTTCGATTGTGAGTGCAATTCTGGTTGGCGTAAACCTCGAA
TTGGTTTCTTCACGATCCCTTATTGTGTTCTTCCCAACTGCACCGGCGAATTTCAAAGTGGCGGTGGATCTCCACCTCGACCACCACTGCCGCCATCAACGGTCGCCCCT
TTCCTTCATGCACCTGTTGGTTTCTTAAACTTTTCAGCTTGCCGGGTTGTTTGGTGTGGGAATGGAACCTGCGTGGCGGATGAAGCAGCAGCTGCATTCTCGTACAGTTG
CCATTGCCGCCAAGGATTCGAAAATCTGTTGAACTTGACATTCTTACCATGCTTCAGGCCAGGCTATTTTGGAGAAGTTTGTAACTGTGGAGCATCTCCACATAGAAGTG
CATCTGCTTCAATTCCTCAAAAAATTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAGGCTTCGATCTCTGCATCCTCATGCTCATTTCTTTTCATTTTTTCCTTCCATCCAGTGGAATCCAGAACTCTAATGAGTTGGTTTCGAGCTCATCCCGAGG
TAGTGCTGTGTGCTCAGCCATAAATTGTGGGCAAGGAACTTGCAAGGCATCTAATGCTTCATTTCTTGGTTTCGATTGTGAGTGCAATTCTGGTTGGCGTAAACCTCGAA
TTGGTTTCTTCACGATCCCTTATTGTGTTCTTCCCAACTGCACCGGCGAATTTCAAAGTGGCGGTGGATCTCCACCTCGACCACCACTGCCGCCATCAACGGTCGCCCCT
TTCCTTCATGCACCTGTTGGTTTCTTAAACTTTTCAGCTTGCCGGGTTGTTTGGTGTGGGAATGGAACCTGCGTGGCGGATGAAGCAGCAGCTGCATTCTCGTACAGTTG
CCATTGCCGCCAAGGATTCGAAAATCTGTTGAACTTGACATTCTTACCATGCTTCAGGCCAGGCTATTTTGGAGAAGTTTGTAACTGTGGAGCATCTCCACATAGAAGTG
CATCTGCTTCAATTCCTCAAAAAATTGGTTAAACTTCCTCTTCATCATCATCTTTTAATTTTTTTTAAAAAACTGCTTCAGTTGGTTATAGTTCCTC
Protein sequenceShow/hide protein sequence
MKKGFDLCILMLISFHFFLPSSGIQNSNELVSSSSRGSAVCSAINCGQGTCKASNASFLGFDCECNSGWRKPRIGFFTIPYCVLPNCTGEFQSGGGSPPRPPLPPSTVAP
FLHAPVGFLNFSACRVVWCGNGTCVADEAAAAFSYSCHCRQGFENLLNLTFLPCFRPGYFGEVCNCGASPHRSASASIPQKIG