; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0022418 (gene) of Chayote v1 genome

Gene IDSed0022418
OrganismSechium edule (Chayote v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationLG04:26232739..26235608
RNA-Seq ExpressionSed0022418
SyntenySed0022418
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022935020.1 uncharacterized protein LOC111442008 [Cucurbita moschata]6.7e-4476.87Show/hide
Query:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR
        +SL +F R S+      +  AAPFPPSN+PMRP ALSL Q     +R ST+VAA+GDVSA GTTYLIAGAVAVALVGTAFPI FSRKDLCPECDGAGFVR
Subjt:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR

Query:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        +SGAALRANAARKDQ QIVCARCNGLGKLNQVDK
Subjt:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK

XP_022960729.1 uncharacterized protein LOC111461414 [Cucurbita moschata]2.6e-4378.2Show/hide
Query:  SSLYSFARTST----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRK
        +SL SF R S+        AAPFPPSN P+RP ALSL Q    +KR STIVAA+GDVSA GTTYLIAGAVAVALVGTAFPI FSRKDLCP CDGAGFVRK
Subjt:  SSLYSFARTST----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRK

Query:  SGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        SGAALRANAARKDQ QIVC+RCNGLGKLNQVDK
Subjt:  SGAALRANAARKDQIQIVCARCNGLGKLNQVDK

XP_022983996.1 uncharacterized protein LOC111482446 [Cucurbita maxima]6.7e-4477.61Show/hide
Query:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQKK----RASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR
        +SL +F R S+      +  AAPFPPSN+PMRP ALSL Q      R ST+VAAVGDVSA GTTYLIAGAVAVALVGTAFPI FSRKDLCPECDGAGFVR
Subjt:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQKK----RASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR

Query:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        +SGAALRANAARKDQ QIVCARCNGLGKLNQVDK
Subjt:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK

XP_023528629.1 uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo]6.7e-4476.87Show/hide
Query:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR
        +SL +F R S+      +  AAPFPPSN+PMRP ALSL Q     +R ST+VAA+GDVSA GTTYLIAGAVAVALVGTAFPI FSRKDLCPECDGAGFVR
Subjt:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR

Query:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        +SGAALRANAARKDQ QIVCARCNGLGKLNQVDK
Subjt:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK

XP_023539540.1 uncharacterized protein LOC111800182 [Cucurbita pepo subsp. pepo]6.7e-4478.95Show/hide
Query:  SSLYSFARTST----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRK
        +SL SF R S+        AAPFPPSNRP+RP ALSL Q    +KR STIVAA+GDVSA GTTYLIAGAVAVALVGTAFPI FSRKDLCP CDGAGFVRK
Subjt:  SSLYSFARTST----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRK

Query:  SGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        SGAALRANAARKDQ QIVC+RCNGLGKLNQVDK
Subjt:  SGAALRANAARKDQIQIVCARCNGLGKLNQVDK

TrEMBL top hitse value%identityAlignment
A0A1S3B5E7 uncharacterized protein LOC1034863752.8e-4375.37Show/hide
Query:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR
        +SL SF R S+      S   APFPPSN P+RP  LSL Q     KR ST+VAAVGDVS+ GTTYLIAGA+AVALVGTAFPIFFSRKDLCPEC+GAGFVR
Subjt:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR

Query:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        +SG+ALRANAARKDQ QIVCARCNGLGKLNQVDK
Subjt:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK

A0A6J1F9E5 uncharacterized protein LOC1114420083.3e-4476.87Show/hide
Query:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR
        +SL +F R S+      +  AAPFPPSN+PMRP ALSL Q     +R ST+VAA+GDVSA GTTYLIAGAVAVALVGTAFPI FSRKDLCPECDGAGFVR
Subjt:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR

Query:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        +SGAALRANAARKDQ QIVCARCNGLGKLNQVDK
Subjt:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK

A0A6J1HBY8 uncharacterized protein LOC1114614141.2e-4378.2Show/hide
Query:  SSLYSFARTST----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRK
        +SL SF R S+        AAPFPPSN P+RP ALSL Q    +KR STIVAA+GDVSA GTTYLIAGAVAVALVGTAFPI FSRKDLCP CDGAGFVRK
Subjt:  SSLYSFARTST----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRK

Query:  SGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        SGAALRANAARKDQ QIVC+RCNGLGKLNQVDK
Subjt:  SGAALRANAARKDQIQIVCARCNGLGKLNQVDK

A0A6J1I3R1 uncharacterized protein LOC1114702761.6e-4379.1Show/hide
Query:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR
        +SL SF R S+     H A AAPFPPSN P RP ALSL Q    +KR STIVAA+GDVSA GTTYLIAGAVAVALVGTAFPI FSRKDLCP CDGAGFVR
Subjt:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR

Query:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        KSGAALRANAARKDQ QIVC+RCNGLGKLNQVDK
Subjt:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK

A0A6J1J3Y5 uncharacterized protein LOC1114824463.3e-4477.61Show/hide
Query:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQKK----RASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR
        +SL +F R S+      +  AAPFPPSN+PMRP ALSL Q      R ST+VAAVGDVSA GTTYLIAGAVAVALVGTAFPI FSRKDLCPECDGAGFVR
Subjt:  SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQKK----RASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVR

Query:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        +SGAALRANAARKDQ QIVCARCNGLGKLNQVDK
Subjt:  KSGAALRANAARKDQIQIVCARCNGLGKLNQVDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02160.1 unknown protein8.8e-3475.82Show/hide
Query:  QKKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVCARCNGLGKLNQVDK
        ++  +S +VAAVGDVS+ GT YLI GA+AVALVGTAFPI F RKD CPECDGAGFVRK G  LRANAARKD  QIVCA CNGLGKLNQ+DK
Subjt:  QKKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVCARCNGLGKLNQVDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCTCCTTGTATTCATTTGCACGCACTTCCACGCATTCGGCCACCGCCGCCCCTTTTCCGCCCTCCAACCGCCCCATGAGACCGCCCGCGCTGTCCCTCCTCCA
GAAGAAGAGAGCTTCTACCATTGTCGCCGCCGTTGGCGACGTCTCCGCCGCCGGCACCACCTATCTGATCGCCGGCGCCGTCGCTGTGGCCCTCGTCGGTACCGCCTTTC
CTATCTTTTTCTCTCGCAAAGATCTGTGTCCGGAGTGCGACGGCGCAGGGTTTGTCCGGAAGTCGGGGGCGGCGCTGAGGGCGAATGCGGCTCGTAAAGACCAAATTCAG
ATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAATCAAGTCGACAAATAA
mRNA sequenceShow/hide mRNA sequence
TTCAATTTCAAATCATCTCTCTATTATATCCATAAACCCCATTCAAAACTTTCGGTCCATCTTTCTCATTTCAGCCCTCGATCATGGCATCCTCCTTGTATTCATTTGCA
CGCACTTCCACGCATTCGGCCACCGCCGCCCCTTTTCCGCCCTCCAACCGCCCCATGAGACCGCCCGCGCTGTCCCTCCTCCAGAAGAAGAGAGCTTCTACCATTGTCGC
CGCCGTTGGCGACGTCTCCGCCGCCGGCACCACCTATCTGATCGCCGGCGCCGTCGCTGTGGCCCTCGTCGGTACCGCCTTTCCTATCTTTTTCTCTCGCAAAGATCTGT
GTCCGGAGTGCGACGGCGCAGGGTTTGTCCGGAAGTCGGGGGCGGCGCTGAGGGCGAATGCGGCTCGTAAAGACCAAATTCAGATCGTTTGTGCTCGTTGCAATGGCCTT
GGCAAGCTCAATCAAGTCGACAAATAAGTTTAAAAGGTTTAAATACTATCTTCATTTTTTATATTTTGAGTTTTATTCTATTTTGATCCTCCAACAACTTCAGTCCATCG
ACATATAAAAGAAGATTTTTTTAAAAAGAACTTAAAATTCATTCATTTAAAAATATGTTCCATTTTGTTCTTATTTGCACTAAAATTATGGGAAATTTTTACATGTATAA
CAAAAAAAAAATCAAAAAATATTGTCTATACCCTTTTTAAAAAAAATAATTTAGCAGAAAATTTGGCCAATCACGATAAAATGACTAAAATACTCTCGCTTCAATTAATT
CATTGACAACTTTGATAATCATCTATTAAGGGAAAAATTGAAAAAAAAATACTCTACCTAAATCGGTTATACATGTATTGTTTTTTTTATAAAAAAAAAAGGTGCTATAA
TTATAAATGACAAGAAAGAATTGTTATGTGAAACAATTTTTCTAAAATTATTAATATCATGGATCAAATTTCATTAATATTAACTTCAAATGTATCTTATGAATTAATTT
TAAGTTTTTTTTTAATTACGGGGACTAAAATTTGACAATTTAAAATTTGTGGATCAAAATTGGTATAAAACTTGAAATATAAAAACTAAAATAGTATTTTTAACCTATTT
TAATCTTGTTTTTTCGGCAGCTTTGGTGTCATTATTAAATATACATACTTTATTAATGTGGTTGTAATAATGTATTTGAGGCTTGTATAACATCTTAGACCGTATTTCAC
ACCCTAATAATTTAGTTCACAAATCTCTCAAAAGAATGTCACAATTATGTTTCTTTGAATTAATTTTTTATAATAAATTTGATTGGAAATAATAGTACATAAGTGCACGA
AACTGTGATTTTGATCGAAAACTAAAGTCGAATGAATTATTTTCACATGTTTCAACTACTACAAAAAGTTTAATCTAAGGACATTGCTGAAAGAAAAGATATGTAAAATC
TTAAATGTTATAAATAACAAATTTCAGACCAAAAATATGTTTTAACAAATAAAATAGTTGCAAATTTTCACGTCTCGGTATATTGTACCATTGGTTTTATGTATAACATT
TGGATGACATTCTTAGATAAATAATAAGTTTTTCTTGCAATTAATGTACACATTTCCGGTACATGACCGTTGTCAAGGAATGAAATTTCATTTGTTGACCTAAGAGAAAT
CAAATCAAGCACCAACATATTATATGAAGGCATTTGTTATATGCAAATTTGAAATTTGTGGAAATTTTGAATAATATTAAAAGTATATTAGACACGGAA
Protein sequenceShow/hide protein sequence
MASSLYSFARTSTHSATAAPFPPSNRPMRPPALSLLQKKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQ
IVCARCNGLGKLNQVDK