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Sed0022431 (gene) of Chayote v1 genome

Gene IDSed0022431
OrganismSechium edule (Chayote v1)
DescriptionLa-related protein 6 isoform 1
Genome locationLG03:45064644..45067499
RNA-Seq ExpressionSed0022431
SyntenySed0022431
Gene Ontology termsGO:0062197 - cellular response to chemical stress (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020916.1 hypothetical protein SDJN02_17604 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-5772.45Show/hide
Query:  MSLASPQLGFLST------APRRRHCRRSNHLLRS--PVVASKLADH--HPNGDETG----LAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSA
        MSLAS QL FLST      AP     RRSN++L S  P++ASKL  H   PNG E G    LAKLAIVTLAAGVL+ GSVHDASAAKTGGRVGGQAFRSA
Subjt:  MSLASPQLGFLST------APRRRHCRRSNHLLRS--PVVASKLADH--HPNGDETG----LAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSA

Query:  APRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWS------PVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD
        APR SSPR+N NNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWS      P PSVAVGIGGGFD L+LFIFLGTVAAF RR  G R +DDDD
Subjt:  APRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWS------PVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD

XP_022969609.1 uncharacterized protein LOC111468585 [Cucurbita maxima]1.3e-5671.94Show/hide
Query:  MSLASPQLGFLST------APRRRHCRRSNHLLRS--PVVASKLAD--HHPNGDETG----LAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSA
        MSLAS QL FLST      AP     RRSN++L S  P++ASKL     +PNG E G    LAKLAIVTLAAGVL  GSVHDASAAKTGGRVGGQAFRSA
Subjt:  MSLASPQLGFLST------APRRRHCRRSNHLLRS--PVVASKLAD--HHPNGDETG----LAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSA

Query:  APRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWS------PVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD
        APR SSPR+N NNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWS      P PSVAVGIGGGFD L+LFIFLGTVAAF RR  G R++DDDD
Subjt:  APRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWS------PVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD

XP_023536753.1 uncharacterized protein LOC111798034 [Cucurbita pepo subsp. pepo]2.0e-5772.22Show/hide
Query:  MSLASPQLGFLST------APRRRHCRRSNHLLRS--PVVASKLAD--HHPNGDETG----LAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSA
        MSLAS QL FLST      AP     RRSN++L S  P++ASKL      PNG E G    LAKLAIVTLAAGVL+ GSVHDASAAKTGGRVGGQAFRSA
Subjt:  MSLASPQLGFLST------APRRRHCRRSNHLLRS--PVVASKLAD--HHPNGDETG----LAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSA

Query:  APRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWS------PVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDDDY
        APR SSPR+N NNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWS      P PSVAVGIGGGFD L+LFIFLGTVAAF RR  G R +DDDDDY
Subjt:  APRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWS------PVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDDDY

XP_038889537.1 uncharacterized protein LOC120079434 isoform X1 [Benincasa hispida]2.5e-5772.02Show/hide
Query:  MSLASPQLGFLSTA----PRRRHCRRSNHLLRS--PVVASKL--ADHHPN-----GDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAA
        MSLAS QL FLSTA       R  RR+N+LL S    V+ KL  A   PN     G E  LAKLAIVTLAAGVL  GSVHDASAAKTGGRVGGQAFRSAA
Subjt:  MSLASPQLGFLSTA----PRRRHCRRSNHLLRS--PVVASKL--ADHHPN-----GDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAA

Query:  PRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDD
        PR SSPR+N NNSRTNIYINPRVAPPLVGGYG+GYGVPYYGGWGWSP       P+VAVGIGGGFD L LFI LGTVAAF RR FG R+DDDD
Subjt:  PRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDD

XP_038889538.1 uncharacterized protein LOC120079434 isoform X2 [Benincasa hispida]1.8e-5873.4Show/hide
Query:  MSLASPQLGFLSTA----PRRRHCRRSNHLLRS--PVVASKL--ADHHPNGDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAAPRPSS
        MSLAS QL FLSTA       R  RR+N+LL S    V+ KL  A   P G E  LAKLAIVTLAAGVL  GSVHDASAAKTGGRVGGQAFRSAAPR SS
Subjt:  MSLASPQLGFLSTA----PRRRHCRRSNHLLRS--PVVASKL--ADHHPNGDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAAPRPSS

Query:  PRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDD
        PR+N NNSRTNIYINPRVAPPLVGGYG+GYGVPYYGGWGWSP       P+VAVGIGGGFD L LFI LGTVAAF RR FG R+DDDD
Subjt:  PRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDD

TrEMBL top hitse value%identityAlignment
A0A1S3BRQ8 uncharacterized protein LOC1034927851.2e-5568.25Show/hide
Query:  MSLASPQLGFLSTA------PRRRHCRRSNHLLRSPVVASKL--ADHHPNGDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAAPRPSS
        MSL S QL FLSTA      P R H  R  +   S VV+ KL  A   P G+E  +AKLAIVTL AG+L  GSVHDASAAKTGGRVGGQAFRSAAPRPSS
Subjt:  MSLASPQLGFLSTA------PRRRHCRRSNHLLRSPVVASKL--ADHHPNGDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAAPRPSS

Query:  PRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD
        PR+N NNSRTNIYINPRVAPPLVGGYG+GYGVPYYGGWGWSP       P+VAVGIGGG D L  FI LG+VAAF R++ G R+ DDDD
Subjt:  PRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD

A0A5A7U097 La-related protein 6 isoform 11.2e-5568.25Show/hide
Query:  MSLASPQLGFLSTA------PRRRHCRRSNHLLRSPVVASKL--ADHHPNGDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAAPRPSS
        MSL S QL FLSTA      P R H  R  +   S VV+ KL  A   P G+E  +AKLAIVTL AG+L  GSVHDASAAKTGGRVGGQAFRSAAPRPSS
Subjt:  MSLASPQLGFLSTA------PRRRHCRRSNHLLRSPVVASKL--ADHHPNGDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAAPRPSS

Query:  PRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD
        PR+N NNSRTNIYINPRVAPPLVGGYG+GYGVPYYGGWGWSP       P+VAVGIGGG D L  FI LG+VAAF R++ G R+ DDDD
Subjt:  PRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD

A0A6J1DIH1 uncharacterized protein LOC1110208185.2e-5668.69Show/hide
Query:  MSLASPQLGFL------STAPRRRHCRRSNHLLRS--PVVASKL--AD-------HHPNGDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAF
        M+LAS Q  FL      + A   R  RR   LL S    V+SKL  AD          +G+E  LAKLAIVTLAAGVL  GSVHDASAAKTGGRVGGQAF
Subjt:  MSLASPQLGFL------STAPRRRHCRRSNHLLRS--PVVASKL--AD-------HHPNGDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAF

Query:  RSAAPRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD
        RSAAPRPSSPR+N NNSRTNIYINP VAPPLVGGYG+GYGVPYYGGWGWSP       PSVAVGIGGGFD L LFIFLG+VAA  RR FGTR+DDDDD
Subjt:  RSAAPRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD

A0A6J1FDE3 uncharacterized protein LOC1114443532.3e-5671.94Show/hide
Query:  MSLASPQLGFLST------APRRRHCRRSNHLLRS--PVVASKLAD--HHPNGDETG----LAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSA
        MSLAS QL FLST      AP     RRSN++L S  P++ASKL      PNG E G    LAKLAIVTLAAGVL+ GSVHDASAAKTGGRVGGQAFRSA
Subjt:  MSLASPQLGFLST------APRRRHCRRSNHLLRS--PVVASKLAD--HHPNGDETG----LAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSA

Query:  APRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWS------PVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD
        APR SSPR+N NNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWS      P PSVAVGIGGGFD L+LFIFLGTVAAF RR  G R +DDDD
Subjt:  APRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWS------PVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD

A0A6J1I348 uncharacterized protein LOC1114685856.1e-5771.94Show/hide
Query:  MSLASPQLGFLST------APRRRHCRRSNHLLRS--PVVASKLAD--HHPNGDETG----LAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSA
        MSLAS QL FLST      AP     RRSN++L S  P++ASKL     +PNG E G    LAKLAIVTLAAGVL  GSVHDASAAKTGGRVGGQAFRSA
Subjt:  MSLASPQLGFLST------APRRRHCRRSNHLLRS--PVVASKLAD--HHPNGDETG----LAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSA

Query:  APRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWS------PVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD
        APR SSPR+N NNSRTNIYINPRVAPPLVG  GYGYGVPYY GGWGWS      P PSVAVGIGGGFD L+LFIFLGTVAAF RR  G R++DDDD
Subjt:  APRPSSPRLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYY-GGWGWS------PVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57345.1 unknown protein1.4e-4253.97Show/hide
Query:  SLASPQLGFLSTAPRRRHC---RRSNHLLRSPVVASKLADHHPNGD-----ETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAAPRPSSP
        ++AS +  FLS     +H    + + +L R   +  K + H    D     E  LAKLAI TLA GVLA GSV DA AAK+GGR+GGQAFRS+APRP  P
Subjt:  SLASPQLGFLSTAPRRRHC---RRSNHLLRSPVVASKLADHHPNGD-----ETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAAPRPSSP

Query:  RLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDDD
        R+N N SRTNIY+NP+VAPPL+GGYGYG     YGG+GWSP       P+VAVG+GGGFD LLLF+F G  +A AR  F +R D+DD+D
Subjt:  RLNSNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPV------PSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTAGCCTCACCTCAACTCGGCTTTCTCTCCACCGCCCCCCGCCGCCGCCACTGCCGGAGGAGCAACCACCTTCTCCGTTCTCCCGTCGTCGCCTCCAAACTCGC
CGATCACCATCCCAATGGAGATGAGACTGGTCTGGCGAAGCTTGCCATTGTTACTCTGGCGGCTGGGGTTTTGGCATTCGGATCGGTTCACGACGCTTCCGCCGCGAAGA
CCGGCGGCCGAGTCGGCGGTCAGGCCTTCCGGTCGGCTGCTCCTCGCCCTTCCTCCCCCAGACTCAACAGCAACAATTCTAGGACAAATATATACATAAATCCAAGAGTA
GCACCTCCATTAGTAGGTGGTTATGGTTATGGTTATGGTGTGCCATACTATGGAGGATGGGGATGGTCACCAGTCCCAAGTGTTGCTGTTGGCATTGGAGGAGGCTTTGA
TACTCTACTTCTCTTCATTTTTCTTGGAACTGTTGCAGCTTTTGCTAGAAGATTATTTGGAACAAGGCAAGATGATGATGATGATGATTATTAA
mRNA sequenceShow/hide mRNA sequence
CCGAAACCCTCATTTCTGGATTCCGCCATTGAAGCACGCTTGGAGTTTTGCTCACAATGTCATTAGCCTCACCTCAACTCGGCTTTCTCTCCACCGCCCCCCGCCGCCGC
CACTGCCGGAGGAGCAACCACCTTCTCCGTTCTCCCGTCGTCGCCTCCAAACTCGCCGATCACCATCCCAATGGAGATGAGACTGGTCTGGCGAAGCTTGCCATTGTTAC
TCTGGCGGCTGGGGTTTTGGCATTCGGATCGGTTCACGACGCTTCCGCCGCGAAGACCGGCGGCCGAGTCGGCGGTCAGGCCTTCCGGTCGGCTGCTCCTCGCCCTTCCT
CCCCCAGACTCAACAGCAACAATTCTAGGACAAATATATACATAAATCCAAGAGTAGCACCTCCATTAGTAGGTGGTTATGGTTATGGTTATGGTGTGCCATACTATGGA
GGATGGGGATGGTCACCAGTCCCAAGTGTTGCTGTTGGCATTGGAGGAGGCTTTGATACTCTACTTCTCTTCATTTTTCTTGGAACTGTTGCAGCTTTTGCTAGAAGATT
ATTTGGAACAAGGCAAGATGATGATGATGATGATTATTAAGTGGTGCTAAATCCCTTGAATGGGATCTTAGATTTCAAACTTTATGTATATTTCACACTATTGAACTTGG
CTTTTTGGTGGGAGAGTCTTTTCTTGGTCATTTAGAGACTCTTTGTATACAAAGTTTAATGTATAAAATGTATAGTCATTAATGTAACTTCTCTTTTAATCTACCATAAA
TTCTATAATGAGTTAGTGTTCTAATCCAATCGGAAGATGTAACAATAGATATTTTAATCGGA
Protein sequenceShow/hide protein sequence
MSLASPQLGFLSTAPRRRHCRRSNHLLRSPVVASKLADHHPNGDETGLAKLAIVTLAAGVLAFGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRLNSNNSRTNIYINPRV
APPLVGGYGYGYGVPYYGGWGWSPVPSVAVGIGGGFDTLLLFIFLGTVAAFARRLFGTRQDDDDDDY