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Sed0022436 (gene) of Chayote v1 genome

Gene IDSed0022436
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:30684318..30684950
RNA-Seq ExpressionSed0022436
SyntenySed0022436
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579170.1 hypothetical protein SDJN03_23618, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0554.41Show/hide
Query:  MAAATAVTAAAA---SRWVPKRGQVLRRVIKKLFFFYLCS-ADDRNPPPPPT-------SSPRVFPSN
        MAAA A   A A    R +PKRG VLRRV++KLFFF +CS A+ + PPPPP        SS RVFP N
Subjt:  MAAATAVTAAAA---SRWVPKRGQVLRRVIKKLFFFYLCS-ADDRNPPPPPT-------SSPRVFPSN

KAG6594821.1 hypothetical protein SDJN03_11374, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0457.69Show/hide
Query:  MAAATAVTAAAASRWVPKRGQVLRRVIKKLFFFYLCSADDRNPPPPPTSSPR
        MAAAT     AA RW+PKRGQVLRR++KKLFF   CS+     PPPP+++ R
Subjt:  MAAATAVTAAAASRWVPKRGQVLRRVIKKLFFFYLCSADDRNPPPPPTSSPR

KGN49746.1 hypothetical protein Csa_017810 [Cucumis sativus]3.6e-0564.44Show/hide
Query:  AAASRWVPKRGQVLRRVIKKLFFFYLCSADDRNPPPPPTSSPRVF
        A A RW+PKRG+VLRRV+K LFFF LCS      PPP  SS RVF
Subjt:  AAASRWVPKRGQVLRRVIKKLFFFYLCSADDRNPPPPPTSSPRVF

TrEMBL top hitse value%identityAlignment
A0A0A0KPU0 Uncharacterized protein1.8e-0564.44Show/hide
Query:  AAASRWVPKRGQVLRRVIKKLFFFYLCSADDRNPPPPPTSSPRVF
        A A RW+PKRG+VLRRV+K LFFF LCS      PPP  SS RVF
Subjt:  AAASRWVPKRGQVLRRVIKKLFFFYLCSADDRNPPPPPTSSPRVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCACCGCCGTTACCGCCGCCGCAGCTTCTCGATGGGTTCCCAAACGCGGTCAAGTCCTCCGCCGTGTAATTAAAAAGCTCTTCTTTTTCTACCTCTGCTC
CGCCGACGACCGGAACCCTCCTCCGCCGCCCACTTCCTCCCCTCGCGTTTTTCCTTCAAATTAA
mRNA sequenceShow/hide mRNA sequence
AGAAACGCTGAGCGTGAGGAACAAGTCTTGGTCTTGGAAGCCAAAACGCGTAGGGGGAAGTTACGCGTTAGCACTTCGTTTTGAGTCCGACGTCGCTTTATAACTCAGTG
ACAAATTTACCCTCTCCCTCTCTCTCTCTCTAACTCACTTTCCTCTTCCTTTCCTTTTTCTTACACACTCTCTCTCTCTCTCTAAATGGCCGCCGCCACCGCCGTTACCG
CCGCCGCAGCTTCTCGATGGGTTCCCAAACGCGGTCAAGTCCTCCGCCGTGTAATTAAAAAGCTCTTCTTTTTCTACCTCTGCTCCGCCGACGACCGGAACCCTCCTCCG
CCGCCCACTTCCTCCCCTCGCGTTTTTCCTTCAAATTAAAAAAAAAGTGCGATCAACGGAATCGAAATTCCATTCATTTTTATTTTTCGTTTGTGTTTCTAAAATATGTT
TTTTTTTAGTTCAAACAATTGCCATCTTTTCTTTTAGATGGTAAAAATATGGGAAGGTGTGCGATCGAATATTCCATGTGATAGTAATGTTCGAATATGTTCAAATTGAC
ATTATTTATTTCTTTTATTTGGCATGCAAAGAAAGGAAAAAAAAATTGAAGTTCTTTTTAGTATAAATAAACGTGGAAGGAGT
Protein sequenceShow/hide protein sequence
MAAATAVTAAAASRWVPKRGQVLRRVIKKLFFFYLCSADDRNPPPPPTSSPRVFPSN