CuGenDBv2

Gene ID	Sed0022448
Organism	Sechium edule (Chayote v1)
Description	NERD domain-containing protein
Genome location	LG05:44886032..44894051
RNA-Seq Expression	Sed0022448
Synteny	Sed0022448
Gene Ontology terms	NA
InterPro domains	IPR011528 - Nuclease-related domain, NERD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148081.1 uncharacterized protein LOC101217532 [Cucumis sativus]

1.3e-163

90.03

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MW AI+GGLI+YG+FKLFF+GDDD ME+ETSD NAIFAVA+R EKLYGGNAYVGLRIPDADT SRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK
        DDGKHKAKTLP+PVEETKQLIP+LESYLEQRGV LPAGY+SCKVVLPNPKFRTIDSGLFPSEVITY+QW+QLKPGHSS SGWMKGAFRGKKE QEEPLD+
Subjt:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK

Query:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP
        KLK+ILGTAPMWDKLELKGKYILGDFLEF+GKEEDV  LRDIKRSKIS +TIQKTSMLGFAPTRLQVLYAPRDYRSGGS S SEW+EVTVRSSTEILFQP
Subjt:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP

Query:  QDSTKVRKFKLSSVISLTLSA
        Q+STK RKFKLSSVISLTLSA
Subjt:  QDSTKVRKFKLSSVISLTLSA

XP_008459170.1 PREDICTED: uncharacterized protein LOC103498367 [Cucumis melo]

4.3e-164

90.34

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MW AI+GGL++YG+FKLFF+GDDD ME+ETSD NAIFAVA+R EKLYGG AYVGLRIPDADT SRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK
        DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGV +PAGY+SCKVVLPNPKFRTIDSGLFPSEVITY+QW+QLKPGHSS SGWMKGAFRGKKELQEEPLD+
Subjt:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK

Query:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP
        KLK+ILGTAPMWDKLELKGKYILGDFLEF+GKEEDV  LRDIKRSKIS +TIQKTSMLGFAPTRLQVLYAPRDYRSGGS S SEW+EVTVRSSTEILFQP
Subjt:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP

Query:  QDSTKVRKFKLSSVISLTLSA
        Q+STKVRKFKLSSVISLTLSA
Subjt:  QDSTKVRKFKLSSVISLTLSA

XP_022943551.1 uncharacterized protein LOC111448288 [Cucurbita moschata]

7.6e-161

88.79

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MWVAIIGGLI+Y +FKLFFSGDDD ME+ETSD NAIFAVATR EKLYGG AY+GLRIPDADT SR+NIDLVVVTKEELL+ISVKNLSGFVSINSDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK
        DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGV LP GY+SCKVVLPNPKFRTIDSGLFP EV TY+QW+QLKPGHSS SGWMKGAFRGKKELQ+EPLD+
Subjt:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK

Query:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP
        KLK+ILGTAPMWDKLELKGKYILG+FLEFKGKEEDV DLRDIKRSKIS +TIQKTSMLGFAPTRLQVLY PRDYRSGG    SEWKEVTVRSSTEILFQP
Subjt:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP

Query:  QDSTKVRKFKLSSVISLTLSA
        Q+S+K RKFKLSSVISLTLSA
Subjt:  QDSTKVRKFKLSSVISLTLSA

XP_022986572.1 uncharacterized protein LOC111484272 [Cucurbita maxima]

2.2e-160

88.16

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MWVAI+GGLI+Y +FKLFFSGDDD ME+ETSD NAIFAVATR EKLYGG AY+GLRIPDADT SR+NIDLVVVTKEELL+ISVKNLSGFVSINSDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK
        DDG+HKAKTLPDPVEETKQLIPVLESYLEQRGV LP GY+SCKVVLPNPKFRTIDSGLFP EV TY+QW+QLKPGHSS SGWMKGAFRGKKELQ+EPLD+
Subjt:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK

Query:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP
        KLK+ILGTAPMWDKLELKGKYILG+FLEFKGKEEDV DLRDIKRSKIS +TIQKTSMLGFAPTRLQVLY PRDYRSGG    SEWKEVTVRSSTEILFQP
Subjt:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP

Query:  QDSTKVRKFKLSSVISLTLSA
        Q+S+K RKFKLSSVISLTLSA
Subjt:  QDSTKVRKFKLSSVISLTLSA

XP_038901981.1 uncharacterized protein LOC120088636 [Benincasa hispida]

6.3e-163

90.03

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MW AI GGLIIYG+FKLFF+GDDD ME+ETSD NAIFAVA+R EKLYGG AYVGLRIPDADT SRQNIDLVV+TKEELLVI+VKNLSGFVSINSDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK
        DDGKHKAKTLPDPVEETKQLIPV+ESY+EQRGV LPAGY+SCKVVLPNPKFRTIDSGLFPSEVITY+QW+QLKPGHSS SGWMKGAFRGKKELQEEPLD+
Subjt:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK

Query:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP
        KLK+ILGTAPMWDKLELKGKYILGDFLEFKGK EDV  LRDIKRSKIS +TIQKTSMLGFAPTRLQVLYAPRDYRSGGS S SEW+EVTVRSSTEILFQP
Subjt:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP

Query:  QDSTKVRKFKLSSVISLTLSA
        Q+STKVRKFKLSSVISLTLSA
Subjt:  QDSTKVRKFKLSSVISLTLSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTU6 NERD domain-containing protein

6.1e-164

90.03

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MW AI+GGLI+YG+FKLFF+GDDD ME+ETSD NAIFAVA+R EKLYGGNAYVGLRIPDADT SRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK
        DDGKHKAKTLP+PVEETKQLIP+LESYLEQRGV LPAGY+SCKVVLPNPKFRTIDSGLFPSEVITY+QW+QLKPGHSS SGWMKGAFRGKKE QEEPLD+
Subjt:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK

Query:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP
        KLK+ILGTAPMWDKLELKGKYILGDFLEF+GKEEDV  LRDIKRSKIS +TIQKTSMLGFAPTRLQVLYAPRDYRSGGS S SEW+EVTVRSSTEILFQP
Subjt:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP

Query:  QDSTKVRKFKLSSVISLTLSA
        Q+STK RKFKLSSVISLTLSA
Subjt:  QDSTKVRKFKLSSVISLTLSA

A0A1S3CA35 uncharacterized protein LOC103498367

2.1e-164

90.34

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MW AI+GGL++YG+FKLFF+GDDD ME+ETSD NAIFAVA+R EKLYGG AYVGLRIPDADT SRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK
        DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGV +PAGY+SCKVVLPNPKFRTIDSGLFPSEVITY+QW+QLKPGHSS SGWMKGAFRGKKELQEEPLD+
Subjt:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK

Query:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP
        KLK+ILGTAPMWDKLELKGKYILGDFLEF+GKEEDV  LRDIKRSKIS +TIQKTSMLGFAPTRLQVLYAPRDYRSGGS S SEW+EVTVRSSTEILFQP
Subjt:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP

Query:  QDSTKVRKFKLSSVISLTLSA
        Q+STKVRKFKLSSVISLTLSA
Subjt:  QDSTKVRKFKLSSVISLTLSA

A0A5A7SRC0 Plasma membrane isoform 1

2.1e-164

90.34

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MW AI+GGL++YG+FKLFF+GDDD ME+ETSD NAIFAVA+R EKLYGG AYVGLRIPDADT SRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK
        DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGV +PAGY+SCKVVLPNPKFRTIDSGLFPSEVITY+QW+QLKPGHSS SGWMKGAFRGKKELQEEPLD+
Subjt:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK

Query:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP
        KLK+ILGTAPMWDKLELKGKYILGDFLEF+GKEEDV  LRDIKRSKIS +TIQKTSMLGFAPTRLQVLYAPRDYRSGGS S SEW+EVTVRSSTEILFQP
Subjt:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP

Query:  QDSTKVRKFKLSSVISLTLSA
        Q+STKVRKFKLSSVISLTLSA
Subjt:  QDSTKVRKFKLSSVISLTLSA

A0A6J1FS11 uncharacterized protein LOC111448288

3.7e-161

88.79

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MWVAIIGGLI+Y +FKLFFSGDDD ME+ETSD NAIFAVATR EKLYGG AY+GLRIPDADT SR+NIDLVVVTKEELL+ISVKNLSGFVSINSDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK
        DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGV LP GY+SCKVVLPNPKFRTIDSGLFP EV TY+QW+QLKPGHSS SGWMKGAFRGKKELQ+EPLD+
Subjt:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK

Query:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP
        KLK+ILGTAPMWDKLELKGKYILG+FLEFKGKEEDV DLRDIKRSKIS +TIQKTSMLGFAPTRLQVLY PRDYRSGG    SEWKEVTVRSSTEILFQP
Subjt:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP

Query:  QDSTKVRKFKLSSVISLTLSA
        Q+S+K RKFKLSSVISLTLSA
Subjt:  QDSTKVRKFKLSSVISLTLSA

A0A6J1J7Y0 uncharacterized protein LOC111484272

1.1e-160

88.16

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MWVAI+GGLI+Y +FKLFFSGDDD ME+ETSD NAIFAVATR EKLYGG AY+GLRIPDADT SR+NIDLVVVTKEELL+ISVKNLSGFVSINSDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK
        DDG+HKAKTLPDPVEETKQLIPVLESYLEQRGV LP GY+SCKVVLPNPKFRTIDSGLFP EV TY+QW+QLKPGHSS SGWMKGAFRGKKELQ+EPLD+
Subjt:  DDGKHKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDK

Query:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP
        KLK+ILGTAPMWDKLELKGKYILG+FLEFKGKEEDV DLRDIKRSKIS +TIQKTSMLGFAPTRLQVLY PRDYRSGG    SEWKEVTVRSSTEILFQP
Subjt:  KLKSILGTAPMWDKLELKGKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQP

Query:  QDSTKVRKFKLSSVISLTLSA
        Q+S+K RKFKLSSVISLTLSA
Subjt:  QDSTKVRKFKLSSVISLTLSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G65020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

7.0e-112

65.43

Show/hide

Query:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC
        MW+ II GL+IY + + FF  DD+  ++ETSDS A+F+VA R+EKLYGG AYVGLRIPDADT+SRQ+ID+V+VTK +++VISVKNLSG V++ SDGSW C
Subjt:  MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDC

Query:  DDGK-HKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKP-GHSSISGWMKGAFRGKKELQEEPL
        + GK H  +T PDP+ E K+   VLESYLEQRGV+L  G VSCKVV+PNP FRTI +  FPSEVITYE W QLKP   S ISGW+KGAF   KE+QE   
Subjt:  DDGK-HKAKTLPDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKP-GHSSISGWMKGAFRGKKELQEEPL

Query:  DKKLKSILGTAPMWDKLELK-GKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEIL
         +KL  ILGTAP WD++ELK  K +LG+FLEFKGK+ED   LR+IKRSK+ +++IQKTSM G AP+RLQVLY+ RDYRS GS SG+E KEVTVRSSTE+L
Subjt:  DKKLKSILGTAPMWDKLELK-GKYILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEIL

Query:  FQPQDSTKVRKFKLSSVISLTLSA
        FQP+DSTK++KFKLSS++S++LSA
Subjt:  FQPQDSTKVRKFKLSSVISLTLSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGGTGGCGATTATCGGCGGCCTGATCATTTACGGCATCTTCAAGCTCTTCTTCTCCGGCGACGACGATGCTATGGAGCTCGAAACCTCCGATTCCAATGCTATTTT
CGCCGTCGCCACCAGGGTTGAAAAGCTTTATGGTGGAAATGCTTACGTTGGGCTTCGGATTCCTGATGCTGACACCAGTTCTCGCCAGAATATTGATCTCGTAGTGGTCA
CCAAAGAGGAGTTATTGGTGATATCTGTCAAGAATTTATCAGGATTTGTCTCCATCAATTCAGATGGATCCTGGGATTGTGATGACGGAAAACATAAGGCTAAGACTCTT
CCCGATCCTGTGGAGGAGACCAAACAATTGATACCAGTCCTTGAGTCTTACCTTGAACAAAGAGGAGTGAGTCTTCCAGCAGGTTATGTGTCATGCAAAGTTGTACTTCC
AAATCCAAAATTCCGTACGATTGACTCAGGGTTATTTCCTTCTGAAGTTATTACCTATGAGCAGTGGCTGCAGCTGAAACCGGGACACAGTTCCATCTCTGGTTGGATGA
AAGGTGCATTTCGTGGAAAGAAGGAGTTGCAGGAAGAACCTCTGGACAAAAAGCTTAAATCTATTCTTGGCACTGCACCAATGTGGGATAAATTGGAGCTCAAAGGGAAA
TATATACTAGGAGATTTTCTGGAATTCAAAGGCAAAGAAGAAGATGTTGCAGATTTGAGAGATATCAAACGGTCAAAAATTAGTCAGATGACCATTCAAAAGACGAGCAT
GCTTGGATTTGCTCCTACAAGGCTTCAAGTTTTGTACGCTCCACGCGATTATCGAAGTGGGGGCTCAGTTTCAGGTTCAGAGTGGAAGGAAGTGACGGTAAGATCAAGCA
CAGAGATATTGTTTCAACCTCAGGATTCTACAAAAGTTCGTAAGTTCAAACTCTCTTCAGTTATCTCCTTGACTCTCAGTGCCTAA

mRNA sequence

Show/hide mRNA sequence

AAGTAAAAAACGACGTCAAAAATGGCTCTCTAGTTTCACATTTCCGTCATCCTACCAAGAAATTTCGAACAAAAAACAAAGAATTCAATTCTTTCCTTCGTAGCGAAGAG
AAGTTTCCAACAATCACAAACTCCGACGCCGACAATTGAACGAATTCATCATGTGGGTGGCGATTATCGGCGGCCTGATCATTTACGGCATCTTCAAGCTCTTCTTCTCC
GGCGACGACGATGCTATGGAGCTCGAAACCTCCGATTCCAATGCTATTTTCGCCGTCGCCACCAGGGTTGAAAAGCTTTATGGTGGAAATGCTTACGTTGGGCTTCGGAT
TCCTGATGCTGACACCAGTTCTCGCCAGAATATTGATCTCGTAGTGGTCACCAAAGAGGAGTTATTGGTGATATCTGTCAAGAATTTATCAGGATTTGTCTCCATCAATT
CAGATGGATCCTGGGATTGTGATGACGGAAAACATAAGGCTAAGACTCTTCCCGATCCTGTGGAGGAGACCAAACAATTGATACCAGTCCTTGAGTCTTACCTTGAACAA
AGAGGAGTGAGTCTTCCAGCAGGTTATGTGTCATGCAAAGTTGTACTTCCAAATCCAAAATTCCGTACGATTGACTCAGGGTTATTTCCTTCTGAAGTTATTACCTATGA
GCAGTGGCTGCAGCTGAAACCGGGACACAGTTCCATCTCTGGTTGGATGAAAGGTGCATTTCGTGGAAAGAAGGAGTTGCAGGAAGAACCTCTGGACAAAAAGCTTAAAT
CTATTCTTGGCACTGCACCAATGTGGGATAAATTGGAGCTCAAAGGGAAATATATACTAGGAGATTTTCTGGAATTCAAAGGCAAAGAAGAAGATGTTGCAGATTTGAGA
GATATCAAACGGTCAAAAATTAGTCAGATGACCATTCAAAAGACGAGCATGCTTGGATTTGCTCCTACAAGGCTTCAAGTTTTGTACGCTCCACGCGATTATCGAAGTGG
GGGCTCAGTTTCAGGTTCAGAGTGGAAGGAAGTGACGGTAAGATCAAGCACAGAGATATTGTTTCAACCTCAGGATTCTACAAAAGTTCGTAAGTTCAAACTCTCTTCAG
TTATCTCCTTGACTCTCAGTGCCTAAGAGAGATATGACTAATGAACATGTGTTGCTGATCAGTTTCTCTGCTTACTATTTGTCTCCTCAATGGCTTACTATTTCAGAAAT
AGTTTTTACTTTCAACTTTCAAGGATAGGCTGTATTTCTAAGTAATGAAGAATTTGATAGTTTTTGCTTCTCCTTTTTTGTGTTACTAAGAAGGTATAATTATAATAATA
CATGTGTTTTACCAGTTA

Protein sequence

Show/hide protein sequence

MWVAIIGGLIIYGIFKLFFSGDDDAMELETSDSNAIFAVATRVEKLYGGNAYVGLRIPDADTSSRQNIDLVVVTKEELLVISVKNLSGFVSINSDGSWDCDDGKHKAKTL
PDPVEETKQLIPVLESYLEQRGVSLPAGYVSCKVVLPNPKFRTIDSGLFPSEVITYEQWLQLKPGHSSISGWMKGAFRGKKELQEEPLDKKLKSILGTAPMWDKLELKGK
YILGDFLEFKGKEEDVADLRDIKRSKISQMTIQKTSMLGFAPTRLQVLYAPRDYRSGGSVSGSEWKEVTVRSSTEILFQPQDSTKVRKFKLSSVISLTLSA

Sed0022448 (gene) of Chayote v1 genome