| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004141981.1 probable mediator of RNA polymerase II transcription subunit 26c [Cucumis sativus] | 7.9e-153 | 83.48 | Show/hide |
Query: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
MVRLDLDDFRTILDTA VDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTS PSRCRNCD + G EIKQ SGE K SPSTP FV VEG
Subjt: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
Query: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
+++G DP+ L DDEQKKVLEIKE LEIP Q EDALVELLQNLADMDITFQALKE+DIGRHVNRLRKH SNDVRRLVKHLVRKWK+IVDEWVRLN PGE+
Subjt: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
Query: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
TA+L+ DGDSP QK PQNGYHQVPDFA+SPNPHNG GSDRNNSEPEPKGK +PRRDALPKP Q A TSS+ PQNRQKEQQ+EA QKLASARKRLQE
Subjt: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
Query: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
+YKEAENAKRQRTIQVMDIHEIPKPKN FFSKNKGSGGGSQGRHW
Subjt: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
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| XP_008440997.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c [Cucumis melo] | 1.9e-154 | 84.06 | Show/hide |
Query: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
MVRLDLDDFRTILDTA VDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTS PSRCRNCD + G EIKQ SGE KG SPSTP FV VEG
Subjt: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
Query: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
+++G DP+ L DDEQKKVLEIKE LEIPHQ EDALVELLQNLADMDITFQALKE+DIGRHVNRLRKHSSNDVRRLVKHLVRKWK+IVDEWVRLN PGE+
Subjt: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
Query: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
TA+L+ DGDSP QK PQNGYHQVPDFA+SPNPHNG GSDRNNSEPEPKGK +PRRDA PKP Q A TSS+ PQNRQKEQQ+EA QKLASARKRLQE
Subjt: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
Query: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
+YKEAENAKRQRTIQVMDIHEIPKPKN FFSKNKGSGGGSQGRHW
Subjt: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
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| XP_023003476.1 probable mediator of RNA polymerase II transcription subunit 26c [Cucurbita maxima] | 5.2e-152 | 83.48 | Show/hide |
Query: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
MVRLDLDDFRTILDTA VDVWTFIDTAMEVAS+DYGNQLKNRRDGIVERLY LTS PSRCRNCD + G EIKQSS EAK GSPSTP FV VEG
Subjt: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
Query: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
+++ DP+ DDEQKKVLEIKE LEIPHQ EDALV+LLQNLADMDITFQALKE+DIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLN PGE+
Subjt: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
Query: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREAQ----KLASARKRLQE
ASLI DGDSP QKVPQNGYHQVPDFA+SPNPHNGS GSDRNNSEPEPKGKPMPRRDA PKPAQ AST S+ PQN+ KEQQ+EA KLASARKRLQE
Subjt: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREAQ----KLASARKRLQE
Query: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
+YKEAENAKRQRTIQVMDIH++PKPKNTFFSKNKG GGGSQGRHW
Subjt: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
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| XP_023518861.1 probable mediator of RNA polymerase II transcription subunit 26c [Cucurbita pepo subsp. pepo] | 7.9e-153 | 83.33 | Show/hide |
Query: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
MVRLDLDDFRTILDTA VDVWTFIDTAMEVAS+DYGNQLKNRRDGIVERLY LTS PSRCRNCD + G EIKQSS EAK GSPSTP FVGVEG
Subjt: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
Query: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
+++ DP+ DDEQKKVL+IKE LEIPHQ EDALV+LLQ+LADMDITFQALKE+DIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLN PGE+
Subjt: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
Query: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
ASLI DGDSP QKVPQNGYHQVPDFA+SPNPHNGS GSDRNNSEPEPKGKPMPRRDALPKPAQ ASTSS+ PQN+ KEQQ+EA QKLASARKRLQE
Subjt: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
Query: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNK---GSGGGSQGRHW
+YKEAENAKRQRTIQVMDIH++PKPKNTFFSKNK G GGGSQGRHW
Subjt: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNK---GSGGGSQGRHW
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| XP_038882890.1 probable mediator of RNA polymerase II transcription subunit 26c [Benincasa hispida] | 1.9e-154 | 84.06 | Show/hide |
Query: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
MVRLDLDDFRTILDTA VDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTS PSRCRNCD + G EIKQS GE KG SPSTP FV V+G
Subjt: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
Query: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
+++G DPH L DDEQKKVLEIKE LEIPHQ ED LVELLQNLADMDITFQALKE+DIGRHVNRLRKHSSNDVRRLVKHLVRKWK+IVDEWVRLN PGE+
Subjt: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
Query: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
TA+L+ DGDSP QK PQNGYHQVPDFA+SPNPHNG GSDRNNSEPEPKGK +PRRDA PKPAQ A TSS+ PQNRQKEQQ+EA QKLASARKRLQE
Subjt: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
Query: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
+YKEAENAKRQRTIQVMDIHEIPKPKN FFSKNKGSGGGSQGRHW
Subjt: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KHV9 TFIIS N-terminal domain-containing protein | 3.8e-153 | 83.48 | Show/hide |
Query: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
MVRLDLDDFRTILDTA VDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTS PSRCRNCD + G EIKQ SGE K SPSTP FV VEG
Subjt: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
Query: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
+++G DP+ L DDEQKKVLEIKE LEIP Q EDALVELLQNLADMDITFQALKE+DIGRHVNRLRKH SNDVRRLVKHLVRKWK+IVDEWVRLN PGE+
Subjt: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
Query: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
TA+L+ DGDSP QK PQNGYHQVPDFA+SPNPHNG GSDRNNSEPEPKGK +PRRDALPKP Q A TSS+ PQNRQKEQQ+EA QKLASARKRLQE
Subjt: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
Query: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
+YKEAENAKRQRTIQVMDIHEIPKPKN FFSKNKGSGGGSQGRHW
Subjt: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
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| A0A1S3B2G2 probable mediator of RNA polymerase II transcription subunit 26c | 9.2e-155 | 84.06 | Show/hide |
Query: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
MVRLDLDDFRTILDTA VDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTS PSRCRNCD + G EIKQ SGE KG SPSTP FV VEG
Subjt: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
Query: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
+++G DP+ L DDEQKKVLEIKE LEIPHQ EDALVELLQNLADMDITFQALKE+DIGRHVNRLRKHSSNDVRRLVKHLVRKWK+IVDEWVRLN PGE+
Subjt: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
Query: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
TA+L+ DGDSP QK PQNGYHQVPDFA+SPNPHNG GSDRNNSEPEPKGK +PRRDA PKP Q A TSS+ PQNRQKEQQ+EA QKLASARKRLQE
Subjt: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
Query: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
+YKEAENAKRQRTIQVMDIHEIPKPKN FFSKNKGSGGGSQGRHW
Subjt: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
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| A0A5A7SIU9 Putative mediator of RNA polymerase II transcription subunit 26c | 9.2e-155 | 84.06 | Show/hide |
Query: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
MVRLDLDDFRTILDTA VDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTS PSRCRNCD + G EIKQ SGE KG SPSTP FV VEG
Subjt: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
Query: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
+++G DP+ L DDEQKKVLEIKE LEIPHQ EDALVELLQNLADMDITFQALKE+DIGRHVNRLRKHSSNDVRRLVKHLVRKWK+IVDEWVRLN PGE+
Subjt: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
Query: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
TA+L+ DGDSP QK PQNGYHQVPDFA+SPNPHNG GSDRNNSEPEPKGK +PRRDA PKP Q A TSS+ PQNRQKEQQ+EA QKLASARKRLQE
Subjt: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
Query: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
+YKEAENAKRQRTIQVMDIHEIPKPKN FFSKNKGSGGGSQGRHW
Subjt: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
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| A0A6J1HEQ2 probable mediator of RNA polymerase II transcription subunit 26c | 9.5e-152 | 83.05 | Show/hide |
Query: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
MVRLDLDDFRTILDTA VDVWTFIDTAMEVAS+DYGNQLKNRRDGIVERLY LTS PSRCRNCD + G EIKQS EAK GSPSTP FVGVEG
Subjt: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
Query: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
+++ DP+ DDEQKKVLEIKE LEIPHQ EDALV+LLQNLADMDITFQALKE+DIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLN PGE+
Subjt: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
Query: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
TASLI DGDSP QK+PQNGYHQVPDFA+SPNPHNGS GSDRNNSEPE KGKPMPRRDA PKPAQ ASTSS+ PQN+ KEQQ+EA QKLASARKRLQE
Subjt: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREA----QKLASARKRLQE
Query: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNK---GSGGGSQGRHW
+YKEAENAKRQRTIQVMDIH++PKPKNTFFSKNK G GGGSQGRHW
Subjt: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNK---GSGGGSQGRHW
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| A0A6J1KPD0 probable mediator of RNA polymerase II transcription subunit 26c | 2.5e-152 | 83.48 | Show/hide |
Query: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
MVRLDLDDFRTILDTA VDVWTFIDTAMEVAS+DYGNQLKNRRDGIVERLY LTS PSRCRNCD + G EIKQSS EAK GSPSTP FV VEG
Subjt: MVRLDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDME--------GSEIKQSSGEAKGGSPSTPPFVGVEG
Query: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
+++ DP+ DDEQKKVLEIKE LEIPHQ EDALV+LLQNLADMDITFQALKE+DIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLN PGE+
Subjt: EEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEK
Query: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREAQ----KLASARKRLQE
ASLI DGDSP QKVPQNGYHQVPDFA+SPNPHNGS GSDRNNSEPEPKGKPMPRRDA PKPAQ AST S+ PQN+ KEQQ+EA KLASARKRLQE
Subjt: TASLIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGKPMPRRDALPKPAQSASTSSIIPQNRQKEQQREAQ----KLASARKRLQE
Query: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
+YKEAENAKRQRTIQVMDIH++PKPKNTFFSKNKG GGGSQGRHW
Subjt: SYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A5PKE4 Transcription elongation factor A N-terminal and central domain-containing protein 2 | 1.7e-04 | 28.44 | Show/hide |
Query: EEEGGDPHEDLVDDEQKKVLEI------KELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRL
++ GG ++ + K+V+ I K +LE+P Q+++ LVE L+ L + + LK + IG VN++R+HS ++V L + + +W+ +++ V
Subjt: EEEGGDPHEDLVDDEQKKVLEI------KELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRL
Query: NHPGEKTAS
N P + S
Subjt: NHPGEKTAS
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| F4J4Y5 Probable mediator of RNA polymerase II transcription subunit 26a | 2.1e-15 | 26.74 | Show/hide |
Query: LDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDMEGSEIKQSSGEAKGGSPSTPPFVGVEGEEEGGDPHEDL
+ LD +R D++ ID A+ VA+ D+ + K+R D I E L++ SRC CD I G + VGV G + GD
Subjt: LDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDMEGSEIKQSSGEAKGGSPSTPPFVGVEGEEEGGDPHEDL
Query: VDDEQ-----KKVLEIKELLEIPHQTEDA-LVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEKTAS--
+ E+ +V+ I+++L +D+ L+E L+ L M ++ LK+++IG+ VN LR+HSS+ + +L K L +WK +VD+W +N P E +
Subjt: VDDEQ-----KKVLEIKELLEIPHQTEDA-LVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEKTAS--
Query: -------LIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGS--------PGSDRNNSEPEPKGKPMPRRDALPKPAQSA----------------------
++D + P H + +A PN S G+ R++ E + + K PK A
Subjt: -------LIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGS--------PGSDRNNSEPEPKGKPMPRRDALPKPAQSA----------------------
Query: --STSSIIPQNRQKEQQRE----------------AQKLAS-----------------ARKRLQESYKEAENAKRQRTIQVMDIHEIPK
S + ++ RQ +Q RE +KLA A+++LQESY + ENAKRQRTIQV++ IPK
Subjt: --STSSIIPQNRQKEQQRE----------------AQKLAS-----------------ARKRLQESYKEAENAKRQRTIQVMDIHEIPK
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| F4KFC7 Probable mediator of RNA polymerase II transcription subunit 26c | 2.9e-81 | 51.96 | Show/hide |
Query: LDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDMEG---------------------SEIKQSSGEAKGGSP
+DLDDFR+++D A VDVWTFIDTA+ VASLDYG +LK RRD IVERLYA TS+ ++CRNCD G E + A
Subjt: LDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDMEG---------------------SEIKQSSGEAKGGSP
Query: STPPFVGVEGEEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDE
V VE +++ DP L DDEQK ++EIKE LE P +E++LVELLQNL DMDITFQAL+E+DIGRHVNR+RKH SN+VRRL K LV+KWK+ VDE
Subjt: STPPFVGVEGEEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDE
Query: WVRLNHPGE-KTASLIVDGDSPLQKVPQNG-YHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGK-----PMPRRDALPKPAQSASTSSIIPQNRQKEQQRE
WV+ N PG+ + SLI D DSP+QK NG QVPDF +SP P NG S +N++ EP+ K P PRR++ P PA+ S S Q ++++ +
Subjt: WVRLNHPGE-KTASLIVDGDSPLQKVPQNG-YHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGK-----PMPRRDALPKPAQSASTSSIIPQNRQKEQQRE
Query: AQKLASARKRLQESYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
+ARKRLQ++Y++AENAK+QRTIQVMDIH+IPKPK F KG G GRHW
Subjt: AQKLASARKRLQESYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
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| Q96MN5 Transcription elongation factor A N-terminal and central domain-containing protein 2 | 2.0e-05 | 31.25 | Show/hide |
Query: EEEGGDPHEDLVDDEQKKVLEI------KELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDE
++ GG ++ + K+V+ + K +LE+P QT++ LVE LQ L + + LK + IG VN++RKHS ++V L + + +WK ++
Subjt: EEEGGDPHEDLVDDEQKKVLEI------KELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDE
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| Q9FHK9 Probable mediator of RNA polymerase II transcription subunit 26b | 2.0e-13 | 25.9 | Show/hide |
Query: DVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDM-------EGSEIKQSSGEAKGGSPSTPPFVGVEGEEEG------GDPHE----
D++ ID A+ VA+ D N+ K+RRD I E L++ +RC CD + + ++G GG+ + G +E GD ++
Subjt: DVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDM-------EGSEIKQSSGEAKGGSPSTPPFVGVEGEEEG------GDPHE----
Query: ------DLVDDE-------QKKVLEIKE-LLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLN
+ + DE K+V IKE LL + L++ L++L M + LK ++IG+ VN LRKHSS+ +R+L K L+ +WK++VD+WV
Subjt: ------DLVDDE-------QKKVLEIKE-LLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLN
Query: H-------PGEKTASLIVDGDSPLQKVP---------QNGY---HQVPDFAHSPNP-----HNGSPGSDR---NNSEPEPKGKPMPRRDALPKPAQSAST
E ++D + +P NG+ H NP HN S +R N ++ +P+G M +DA + + +S
Subjt: H-------PGEKTASLIVDGDSPLQKVP---------QNGY---HQVPDFAHSPNP-----HNGSPGSDR---NNSEPEPKGKPMPRRDALPKPAQSAST
Query: SSI------IPQNRQK------------------------EQQREA--------------QKLASARKRLQESYKEAENAKRQRTIQVMDIHEIPKPKNT
+ + Q+ ++ EQ+R+A K A+++LQESY+ ENAK+QRTIQV+++ PK
Subjt: SSI------IPQNRQK------------------------EQQREA--------------QKLASARKRLQESYKEAENAKRQRTIQVMDIHEIPKPKNT
Query: FFSKNKGSGGGSQGRHW
K + G R+W
Subjt: FFSKNKGSGGGSQGRHW
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT3G10820.1 Transcription elongation factor (TFIIS) family protein | 1.3e-15 | 28.51 | Show/hide |
Query: LDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDMEGSEIKQSSGEAKGGSPSTPPFVGVEGEEEGGDPHEDL
+ LD +R D++ ID A+ VA+ D+ + K+R D I E L++ SRC CD I G + VGV G + GD
Subjt: LDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDMEGSEIKQSSGEAKGGSPSTPPFVGVEGEEEGGDPHEDL
Query: VDDEQ-----KKVLEIKELLEIPHQTEDA-LVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEKTAS--
+ E+ +V+ I+++L +D+ L+E L+ L M ++ LK+++IG+ VN LR+HSS+ + +L K L +WK +VD+W +N P E +
Subjt: VDDEQ-----KKVLEIKELLEIPHQTEDA-LVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEKTAS--
Query: -------LIVDGDSPLQKVPQNGYHQVPDFAHSPN
++D + P H + +A PN
Subjt: -------LIVDGDSPLQKVPQNGYHQVPDFAHSPN
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| AT3G10820.2 Transcription elongation factor (TFIIS) family protein | 1.5e-16 | 26.74 | Show/hide |
Query: LDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDMEGSEIKQSSGEAKGGSPSTPPFVGVEGEEEGGDPHEDL
+ LD +R D++ ID A+ VA+ D+ + K+R D I E L++ SRC CD I G + VGV G + GD
Subjt: LDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDMEGSEIKQSSGEAKGGSPSTPPFVGVEGEEEGGDPHEDL
Query: VDDEQ-----KKVLEIKELLEIPHQTEDA-LVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEKTAS--
+ E+ +V+ I+++L +D+ L+E L+ L M ++ LK+++IG+ VN LR+HSS+ + +L K L +WK +VD+W +N P E +
Subjt: VDDEQ-----KKVLEIKELLEIPHQTEDA-LVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLNHPGEKTAS--
Query: -------LIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGS--------PGSDRNNSEPEPKGKPMPRRDALPKPAQSA----------------------
++D + P H + +A PN S G+ R++ E + + K PK A
Subjt: -------LIVDGDSPLQKVPQNGYHQVPDFAHSPNPHNGS--------PGSDRNNSEPEPKGKPMPRRDALPKPAQSA----------------------
Query: --STSSIIPQNRQKEQQRE----------------AQKLAS-----------------ARKRLQESYKEAENAKRQRTIQVMDIHEIPK
S + ++ RQ +Q RE +KLA A+++LQESY + ENAKRQRTIQV++ IPK
Subjt: --STSSIIPQNRQKEQQRE----------------AQKLAS-----------------ARKRLQESYKEAENAKRQRTIQVMDIHEIPK
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| AT5G05140.1 Transcription elongation factor (TFIIS) family protein | 1.4e-14 | 25.9 | Show/hide |
Query: DVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDM-------EGSEIKQSSGEAKGGSPSTPPFVGVEGEEEG------GDPHE----
D++ ID A+ VA+ D N+ K+RRD I E L++ +RC CD + + ++G GG+ + G +E GD ++
Subjt: DVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDM-------EGSEIKQSSGEAKGGSPSTPPFVGVEGEEEG------GDPHE----
Query: ------DLVDDE-------QKKVLEIKE-LLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLN
+ + DE K+V IKE LL + L++ L++L M + LK ++IG+ VN LRKHSS+ +R+L K L+ +WK++VD+WV
Subjt: ------DLVDDE-------QKKVLEIKE-LLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDEWVRLN
Query: H-------PGEKTASLIVDGDSPLQKVP---------QNGY---HQVPDFAHSPNP-----HNGSPGSDR---NNSEPEPKGKPMPRRDALPKPAQSAST
E ++D + +P NG+ H NP HN S +R N ++ +P+G M +DA + + +S
Subjt: H-------PGEKTASLIVDGDSPLQKVP---------QNGY---HQVPDFAHSPNP-----HNGSPGSDR---NNSEPEPKGKPMPRRDALPKPAQSAST
Query: SSI------IPQNRQK------------------------EQQREA--------------QKLASARKRLQESYKEAENAKRQRTIQVMDIHEIPKPKNT
+ + Q+ ++ EQ+R+A K A+++LQESY+ ENAK+QRTIQV+++ PK
Subjt: SSI------IPQNRQK------------------------EQQREA--------------QKLASARKRLQESYKEAENAKRQRTIQVMDIHEIPKPKNT
Query: FFSKNKGSGGGSQGRHW
K + G R+W
Subjt: FFSKNKGSGGGSQGRHW
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| AT5G09850.1 Transcription elongation factor (TFIIS) family protein | 2.1e-82 | 51.96 | Show/hide |
Query: LDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDMEG---------------------SEIKQSSGEAKGGSP
+DLDDFR+++D A VDVWTFIDTA+ VASLDYG +LK RRD IVERLYA TS+ ++CRNCD G E + A
Subjt: LDLDDFRTILDTASVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSLPSRCRNCDMEG---------------------SEIKQSSGEAKGGSP
Query: STPPFVGVEGEEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDE
V VE +++ DP L DDEQK ++EIKE LE P +E++LVELLQNL DMDITFQAL+E+DIGRHVNR+RKH SN+VRRL K LV+KWK+ VDE
Subjt: STPPFVGVEGEEEGGDPHEDLVDDEQKKVLEIKELLEIPHQTEDALVELLQNLADMDITFQALKESDIGRHVNRLRKHSSNDVRRLVKHLVRKWKDIVDE
Query: WVRLNHPGE-KTASLIVDGDSPLQKVPQNG-YHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGK-----PMPRRDALPKPAQSASTSSIIPQNRQKEQQRE
WV+ N PG+ + SLI D DSP+QK NG QVPDF +SP P NG S +N++ EP+ K P PRR++ P PA+ S S Q ++++ +
Subjt: WVRLNHPGE-KTASLIVDGDSPLQKVPQNG-YHQVPDFAHSPNPHNGSPGSDRNNSEPEPKGK-----PMPRRDALPKPAQSASTSSIIPQNRQKEQQRE
Query: AQKLASARKRLQESYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
+ARKRLQ++Y++AENAK+QRTIQVMDIH+IPKPK F KG G GRHW
Subjt: AQKLASARKRLQESYKEAENAKRQRTIQVMDIHEIPKPKNTFFSKNKGSGGGSQGRHW
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